RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 PRAMEF27A3QJZ7 478 aa16.07■□□□□ 0.16
SCAMP4-213ENST00000621748 EIF4E2O60573 245 aaKnown RBP16.07■□□□□ 0.16
SCAMP4-213ENST00000621748 NTN1O95631 604 aa16.07■□□□□ 0.16
SCAMP4-213ENST00000621748 AGR2O95994 175 aa16.07■□□□□ 0.16
SCAMP4-213ENST00000621748 CD8BP10966 210 aa16.07■□□□□ 0.16
SCAMP4-213ENST00000621748 UBL4AP11441 157 aa16.07■□□□□ 0.16
SCAMP4-213ENST00000621748 CHI3L1P36222 383 aaPredicted RBP16.07■□□□□ 0.16
SCAMP4-213ENST00000621748 CDKN2CP42773 168 aa16.07■□□□□ 0.16
SCAMP4-213ENST00000621748 PCYT1AP49585 367 aa16.07■□□□□ 0.16
SCAMP4-213ENST00000621748 CARD18P57730 90 aa16.07■□□□□ 0.16
SCAMP4-213ENST00000621748 KLF10Q13118 480 aa16.07■□□□□ 0.16
SCAMP4-213ENST00000621748 MAPK14Q16539 360 aa16.07■□□□□ 0.16
SCAMP4-213ENST00000621748 TYW3Q6IPR3 259 aaKnown RBP16.07■□□□□ 0.16
SCAMP4-213ENST00000621748 BLOC1S3Q6QNY0 202 aa16.07■□□□□ 0.16
SCAMP4-213ENST00000621748 SPNS3Q6ZMD2 512 aa16.07■□□□□ 0.16
SCAMP4-213ENST00000621748 OR9I1Q8NGQ6 314 aa16.07■□□□□ 0.16
SCAMP4-213ENST00000621748 TSPEARQ8WU66 669 aa16.07■□□□□ 0.16
SCAMP4-213ENST00000621748 ROPN1LQ96C74 230 aa16.07■□□□□ 0.16
SCAMP4-213ENST00000621748 ZG16BQ96DA0 208 aa16.07■□□□□ 0.16
SCAMP4-213ENST00000621748 WFIKKN1Q96NZ8 548 aa16.07■□□□□ 0.16
SCAMP4-213ENST00000621748 CCM2LQ9NUG4 571 aaPredicted RBP16.07■□□□□ 0.16
SCAMP4-213ENST00000621748 NDRG3Q9UGV2 375 aa16.07■□□□□ 0.16
SCAMP4-213ENST00000621748 ST6GALNAC2Q9UJ37 374 aa16.07■□□□□ 0.16
SCAMP4-213ENST00000621748 MCTS1Q9ULC4 181 aaKnown RBP16.07■□□□□ 0.16
SCAMP4-213ENST00000621748 NDUFAF1Q9Y375 327 aa16.07■□□□□ 0.16
SCAMP4-213ENST00000621748 ITPR3Q14573 2671 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 FREM1Q5H8C1 2179 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 RFXANKO14593 260 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 KIAA0513O60268 411 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 CYP7B1O75881 506 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 SYNGR4O95473 234 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 HRGP04196 525 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 NID1P14543 1247 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 ELK4P28324 431 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 ART1P52961 327 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 SKP2Q13309 424 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 CYLC2Q14093 348 aaPredicted RBP16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 FGFBP1Q14512 234 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 QPRTQ15274 297 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 TMEM176BQ3YBM2 270 aaPredicted RBP16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 SLC25A53Q5H9E4 307 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 ATAD3BQ5T9A4 648 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 FBXW10Q5XX13 1052 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 AP1ARQ63HQ0 302 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 ZNF621Q6ZSS3 439 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 RNF130Q86XS8 419 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 TMCO5AQ8N6Q1 288 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 PCYOX1LQ8NBM8 494 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 ATP6V1C2Q8NEY4 427 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 TOR1AIP2Q8NFQ8 470 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 ROBO4Q8WZ75 1007 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 GMPPAQ96IJ6 420 aaPredicted RBP16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 MRGPRX4Q96LA9 322 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 THUMPD3Q9BV44 507 aaKnown RBP16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 LAT2Q9GZY6 243 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 SAP130Q9H0E3 1048 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 ELOVL5Q9NYP7 299 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 ARMCX1Q9P291 453 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 LEF1Q9UJU2 399 aaPredicted RBP16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 PROCRQ9UNN8 238 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 WDR45Q9Y484 360 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 TESMINQ9Y4I5 508 aa16.06■□□□□ 0.16
SCAMP4-213ENST00000621748 PRR14LQ5THK1 2151 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 A0A1W2PP18 115 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 A0A1W2PPR1 153 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 BBIP1A8MTZ0 92 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 ETV2O00321 342 aaPredicted RBP16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 HMGN4O00479 90 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 DNAJA2O60884 412 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 SS18L1O75177 396 aaPredicted RBP16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 BCAS1O75363 584 aaPredicted RBP16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 PLGP00747 810 aaPredicted RBP16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 CSTAP01040 98 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 GSNP06396 782 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 GUSBP08236 651 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 POU2F1P14859 743 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 CCKARP32238 428 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 UGT2B10P36537 528 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 KCNJ5P48544 419 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 KHKP50053 298 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 CCR4P51679 360 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 CBFBQ13951 182 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 POU4F3Q15319 338 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 PDSS1Q5T2R2 415 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 FRRS1Q6ZNA5 592 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 HMGN2P46Q86SG4 172 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 OR6K3Q8NGY3 331 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 NINJ1Q92982 152 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 VPS33AQ96AX1 596 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 SLC39A3Q9BRY0 314 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 SRXN1Q9BYN0 137 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 ZNF385DQ9H6B1 395 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 PLEKHF2Q9H8W4 249 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 PLSCR4Q9NRQ2 329 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 KLHL28Q9NXS3 571 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 PLEKHA6Q9Y2H5 1048 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 EMC9Q9Y3B6 208 aa16.05■□□□□ 0.16
SCAMP4-213ENST00000621748 ZNF469Q96JG9 3925 aaPredicted RBP16.04■□□□□ 0.16
SCAMP4-213ENST00000621748 LOC100653049A0A140TA62 436 aa16.04■□□□□ 0.16
SCAMP4-213ENST00000621748 CASKO14936 926 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms