RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 CLN6Q9NWW5 311 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 SIDT1Q9NXL6 827 aaKnown RBP9.66□□□□□ -0.86
VPS11-208ENST00000621676 FOXJ2Q9P0K8 574 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 ZNF639Q9UID6 485 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 TPRKBQ9Y3C4 175 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 MED31Q9Y3C7 131 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 CEPT1Q9Y6K0 416 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 CDX4O14627 284 aaPredicted RBP9.65□□□□□ -0.86
VPS11-208ENST00000621676 TRAPPC6AO75865 159 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 DBIP07108 87 aaKnown RBP9.65□□□□□ -0.86
VPS11-208ENST00000621676 SPCS2Q15005 226 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 CARTPTQ16568 116 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 ZNF468Q5VIY5 522 aaPredicted RBP9.65□□□□□ -0.86
VPS11-208ENST00000621676 COX15Q7KZN9 410 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 WDR5BQ86VZ2 330 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 ZNF615Q8N8J6 731 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 SETD9Q8NE22 299 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 LCORQ96JN0 433 aaPredicted RBP9.65□□□□□ -0.86
VPS11-208ENST00000621676 CD180Q99467 661 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 KCNS3Q9BQ31 491 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 TMED9Q9BVK6 235 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 HHATLQ9HCP6 504 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 IL17BQ9UHF5 180 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 CNOT11Q9UKZ1 510 aaKnown RBP9.65□□□□□ -0.86
VPS11-208ENST00000621676 ZMIZ1Q9ULJ6 1067 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 SERINC4A6NH21 518 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 KLK2P20151 261 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 GGT2P36268 569 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 ACVR1BP36896 505 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 GRK6P43250 576 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 TSFMP43897 325 aaKnown RBP9.65□□□□□ -0.86
VPS11-208ENST00000621676 GSTM5P46439 218 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 RNF4P78317 190 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 SRYQ05066 204 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 CRMP1Q14194 572 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 ARMCX4Q5H9R4 360 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 SLC27A4Q6P1M0 643 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 FAHD1Q6P587 224 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 TIPARPQ7Z3E1 657 aaKnown RBP9.65□□□□□ -0.86
VPS11-208ENST00000621676 C17orf82Q86X59 251 aaPredicted RBP9.65□□□□□ -0.86
VPS11-208ENST00000621676 FANK1Q8TC84 345 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 NAT6Q93015 286 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 CTHRC1Q96CG8 243 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 ARL5BQ96KC2 179 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 HDHD5Q9BXW7 423 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 BLOC1S6Q9UL45 172 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 GRIP1Q9Y3R0 1128 aa9.65□□□□□ -0.86
VPS11-208ENST00000621676 A0A087WV48 116 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 TRAPPC13A5PLN9 417 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 CSO75390 466 aaKnown RBP9.64□□□□□ -0.87
VPS11-208ENST00000621676 ATP12AP54707 1039 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 EBPQ15125 230 aaKnown RBP9.64□□□□□ -0.87
VPS11-208ENST00000621676 TIGD6Q17RP2 521 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 SLC6A19Q695T7 634 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 USP51Q70EK9 711 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 KANSL1Q7Z3B3 1105 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 BMP8AQ7Z5Y6 402 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 SLC30A8Q8IWU4 369 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 ZNF721Q8TF20 911 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 APOBEC4Q8WW27 367 aaKnown RBP9.64□□□□□ -0.87
VPS11-208ENST00000621676 RASSF5Q8WWW0 418 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 C1GALT1C1Q96EU7 318 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 HRASLS5Q96KN8 279 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 Q96M85 177 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 SECISBP2Q96T21 854 aaKnown RBP9.64□□□□□ -0.87
VPS11-208ENST00000621676 POLR2J2Q9GZM3 115 aaKnown RBP9.64□□□□□ -0.87
VPS11-208ENST00000621676 CDCP1Q9H5V8 836 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 DUSP22Q9NRW4 184 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 REV1Q9UBZ9 1251 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 MALT1Q9UDY8 824 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 PPIEQ9UNP9 301 aaKnown RBP9.64□□□□□ -0.87
VPS11-208ENST00000621676 SATB2Q9UPW6 733 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 WBP11Q9Y2W2 641 aaKnown RBP9.64□□□□□ -0.87
VPS11-208ENST00000621676 PCDHGA3Q9Y5H0 932 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 EFCAB9A8MZ26 197 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 MCIDASD6RGH6 385 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 M0R3G1 203 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 DSCR3O14972 297 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 TRMUO75648 421 aaKnown RBP9.64□□□□□ -0.87
VPS11-208ENST00000621676 TNFSF15O95150 251 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 ADORA3P0DMS8 318 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 GADD45AP24522 165 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 GRK5P34947 590 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 RXRGP48443 463 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 GP2P55259 537 aaKnown RBP9.64□□□□□ -0.87
VPS11-208ENST00000621676 CDH11P55287 796 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 PRSS12P56730 875 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 EEF1A1P68104 462 aaKnown RBP9.64□□□□□ -0.87
VPS11-208ENST00000621676 ANKDD1AQ495B1 522 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 TMPRSS7Q7RTY8 843 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 RFLNBQ8N5W9 214 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 MORN4Q8NDC4 146 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 PSMA8Q8TAA3 256 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 TRIM2Q9C040 744 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 WWTR1Q9GZV5 400 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 ZNF768Q9H5H4 540 aaKnown RBP9.64□□□□□ -0.87
VPS11-208ENST00000621676 HINT3Q9NQE9 182 aaKnown RBP9.64□□□□□ -0.87
VPS11-208ENST00000621676 CALML5Q9NZT1 146 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 EPHA6Q9UF33 1036 aa9.64□□□□□ -0.87
VPS11-208ENST00000621676 H0YAE9 185 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms