RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 OR2M3Q8NG83 312 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 OR4N2Q8NGD1 307 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 OR9I1Q8NGQ6 314 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 OR9A2Q8NGT5 310 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 OR6K3Q8NGY3 331 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 SELENOMQ8WWX9 145 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 EXOSC8Q96B26 276 aaKnown RBP7.01□□□□□ -1.29
CLK1-215ENST00000621181 DGCR14Q96DF8 476 aaKnown RBP7.01□□□□□ -1.29
CLK1-215ENST00000621181 HBEGFQ99075 208 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 SLC29A1Q99808 456 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 MRPS26Q9BYN8 205 aaKnown RBP7.01□□□□□ -1.29
CLK1-215ENST00000621181 TUBB1Q9H4B7 451 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 Q9H521 79 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 COQ10BQ9H8M1 238 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 AKTIPQ9H8T0 292 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 BRF2Q9HAW0 419 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 FOLH1BQ9HBA9 442 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 SPAG4Q9NPE6 437 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 YAE1D1Q9NRH1 226 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 PLSCR4Q9NRQ2 329 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 GIMAP4Q9NUV9 329 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 GMPR2Q9P2T1 348 aaKnown RBP7.01□□□□□ -1.29
CLK1-215ENST00000621181 PCTPQ9UKL6 214 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 CLEC4AQ9UMR7 237 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 SNX6Q9UNH7 406 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 AP4S1Q9Y587 144 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 DNAJC15Q9Y5T4 150 aa7.01□□□□□ -1.29
CLK1-215ENST00000621181 CR1P17927 2039 aa7□□□□□ -1.29
CLK1-215ENST00000621181 GNG14A0A1W2PPG7 69 aa7□□□□□ -1.29
CLK1-215ENST00000621181 TRIM64CA6NLI5 447 aa7□□□□□ -1.29
CLK1-215ENST00000621181 DLGAP1O14490 977 aa7□□□□□ -1.29
CLK1-215ENST00000621181 EIF1AYO14602 144 aaKnown RBP7□□□□□ -1.29
CLK1-215ENST00000621181 MRASO14807 208 aa7□□□□□ -1.29
CLK1-215ENST00000621181 CLOCKO15516 846 aa7□□□□□ -1.29
CLK1-215ENST00000621181 GMFGO60234 142 aa7□□□□□ -1.29
CLK1-215ENST00000621181 OTCP00480 354 aa7□□□□□ -1.29
CLK1-215ENST00000621181 F12P00748 615 aaPredicted RBP7□□□□□ -1.29
CLK1-215ENST00000621181 PDYNP01213 254 aa7□□□□□ -1.29
CLK1-215ENST00000621181 BMP2P12643 396 aa7□□□□□ -1.29
CLK1-215ENST00000621181 IDUAP35475 653 aa7□□□□□ -1.29
CLK1-215ENST00000621181 TRA2BP62995 288 aaKnown RBP7□□□□□ -1.29
CLK1-215ENST00000621181 ZNF155Q12901 538 aaPredicted RBP7□□□□□ -1.29
CLK1-215ENST00000621181 CHRFAM7AQ494W8 412 aa7□□□□□ -1.29
CLK1-215ENST00000621181 GGTA1PQ4G0N0 100 aa7□□□□□ -1.29
CLK1-215ENST00000621181 SAMD4BQ5PRF9 694 aaKnown RBP7□□□□□ -1.29
CLK1-215ENST00000621181 BEND4Q6ZU67 534 aa7□□□□□ -1.29
CLK1-215ENST00000621181 SPATA24Q86W54 205 aa7□□□□□ -1.29
CLK1-215ENST00000621181 HIPK1Q86Z02 1210 aa7□□□□□ -1.29
CLK1-215ENST00000621181 ALDH16A1Q8IZ83 802 aa7□□□□□ -1.29
CLK1-215ENST00000621181 OR4F6Q8NGB9 312 aa7□□□□□ -1.29
CLK1-215ENST00000621181 RNF138Q8WVD3 245 aa7□□□□□ -1.29
CLK1-215ENST00000621181 LRTOMTQ8WZ04 291 aa7□□□□□ -1.29
CLK1-215ENST00000621181 FBXW5Q969U6 566 aa7□□□□□ -1.29
CLK1-215ENST00000621181 ROPN1LQ96C74 230 aa7□□□□□ -1.29
CLK1-215ENST00000621181 C1GALT1C1Q96EU7 318 aa7□□□□□ -1.29
CLK1-215ENST00000621181 GMPPAQ96IJ6 420 aaPredicted RBP7□□□□□ -1.29
CLK1-215ENST00000621181 C1QTNF3Q9BXJ4 246 aa7□□□□□ -1.29
CLK1-215ENST00000621181 SDR39U1Q9NRG7 319 aaPredicted RBP7□□□□□ -1.29
CLK1-215ENST00000621181 ARMC1Q9NVT9 282 aa7□□□□□ -1.29
CLK1-215ENST00000621181 ADA2Q9NZK5 511 aa7□□□□□ -1.29
CLK1-215ENST00000621181 MCTS1Q9ULC4 181 aaKnown RBP7□□□□□ -1.29
CLK1-215ENST00000621181 ABCG2Q9UNQ0 655 aa7□□□□□ -1.29
CLK1-215ENST00000621181 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7□□□□□ -1.294e-7■■■■□ 22.2
CLK1-215ENST00000621181 ALPK2Q86TB3 2170 aa7□□□□□ -1.29
CLK1-215ENST00000621181 CADP27708 2225 aa7□□□□□ -1.29
CLK1-215ENST00000621181 BBIP1A8MTZ0 92 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 NME4O00746 187 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 STX16O14662 325 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 CD5LO43866 347 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 TNFAIP8O95379 198 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 PGM3O95394 542 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 SOD3P08294 240 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 HSD17B1P14061 328 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 ETS2P15036 469 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 TSPAN8P19075 237 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 ATP6V1B2P21281 511 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 MPIP34949 423 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 ACVR1BP36896 505 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 CDKN1AP38936 164 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 SLC6A8P48029 635 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 RFX3P48380 749 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 ALDH3B2P48448 385 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 CLK3P49761 638 aaKnown RBP6.99□□□□□ -1.29
CLK1-215ENST00000621181 FOXA1P55317 472 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 PSG6Q00889 435 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 DYNC1I2Q13409 638 aaKnown RBP6.99□□□□□ -1.29
CLK1-215ENST00000621181 HEPACAMQ14CZ8 416 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 DECR1Q16698 335 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 COQ5Q5HYK3 327 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 LETMD1Q6P1Q0 360 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 SLC15A3Q8IY34 581 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 FAM9CQ8IZT9 166 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 OR7G2Q8NG99 324 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 ZFP28Q8NHY6 868 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 DUSP19Q8WTR2 217 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 ZBED6CLQ96FA7 236 aaPredicted RBP6.99□□□□□ -1.29
CLK1-215ENST00000621181 TMEM204Q9BSN7 226 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 TBL1XR1Q9BZK7 514 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 PTTG2Q9NZH5 202 aa6.99□□□□□ -1.29
CLK1-215ENST00000621181 CCDC167Q9P0B6 97 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms