RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 LPLP06858 475 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 GOT1P17174 413 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 NDUFB7P17568 137 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 KHKP50053 298 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 CHADLQ6NUI6 762 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 EXD3Q8N9H8 876 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 SAT2Q96F10 170 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 URM1Q9BTM9 101 aaKnown RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 SLC25A51Q9H1U9 297 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 BRF2Q9HAW0 419 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 PCDHGA2Q9Y5H1 932 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 A0A0G2JN53 185 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 DPYSL4O14531 572 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 FZD6O60353 706 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 SELENOFO60613 162 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 CATP04040 527 aaKnown RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 AMY2AP04746 511 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 SPATA31C1P0DKV0 1188 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 LAMP2P13473 410 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 CNR2P34972 360 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 POLR2IP36954 125 aaKnown RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 RFX3P48380 749 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 HNRNPKP61978 463 aaKnown RBP eCLIP4.66□□□□□ -1.661e-6■■■■□ 23.8
VPS13D-213ENST00000613099 BEX3Q00994 111 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 ELOA3BQ3SY89 546 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 TSTD2Q5T7W7 516 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 MPZL3Q6UWV2 235 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 ELOA3Q8NG57 546 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 MAP3K3Q99759 626 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 DERL2Q9GZP9 239 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 SPATA6Q9NWH7 488 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 hCG_1809904A0A1W2PP81 198 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 A0A1W2PR64 198 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 A0A1W2PRV1 198 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 GABREP78334 506 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 CRHR2Q13324 411 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 UBE3DQ7Z6J8 389 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 TMEM159Q96B96 161 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 NSA2O95478 260 aaKnown RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 SSBP1Q04837 148 aaKnown RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 DNLZQ5SXM8 178 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 DPY19L4Q7Z388 723 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 OR51F2Q8NH61 342 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 OR5W2Q8NH69 310 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 PIGBQ92521 554 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 DPH7Q9BTV6 452 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 NUDT9Q9BW91 350 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 A6NIZ1 184 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 NDUFA2O43678 99 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 SERPINA5P05154 406 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 ADRB2P07550 413 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 CTSHP09668 335 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 ADPRHP54922 357 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 RAP1BP61224 184 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 SCAPQ12770 1279 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF648Q5T619 568 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 TMCO2Q7Z6W1 182 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 TCTEX1D1Q8N7M0 179 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 OR6K3Q8NGY3 331 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 RNF128Q8TEB7 428 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 FAM193BQ96PV7 902 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 FDXACB1Q9BRP7 624 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 DDA1Q9BW61 102 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 NDUFB11Q9NX14 153 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 PEX10O60683 326 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 RBMXL2O75526 392 aaKnown RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 LRG1P02750 347 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 GALP22466 123 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 HOXC13P31276 330 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 NAA10P41227 235 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 SLC16A12Q6ZSM3 486 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 KIAA0907Q7Z7F0 614 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 ZNF679Q8IYX0 411 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 CDKN2AIPNLQ96HQ2 116 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 FAM210BQ96KR6 192 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 MS4A10Q96PG2 267 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 CD180Q99467 661 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 NMNAT2Q9BZQ4 307 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 SLC2A6Q9UGQ3 507 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 FKBPLQ9UIM3 349 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 IKZF2Q9UKS7 526 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 GBF1Q92538 1859 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 SIX3O95343 332 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 PLGP00747 810 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 GCGP01275 180 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 BCKDHBP21953 392 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 CASRP41180 1078 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 PIGPP57054 158 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 DPYSL2Q16555 572 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 SLC5A12Q1EHB4 618 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 DMRTA1Q5VZB9 504 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 MTMR14Q8NCE2 650 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 GTF3AQ92664 365 aaKnown RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 MCHR2Q969V1 340 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 TMPRSS13Q9BYE2 586 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 CEP250Q9BV73 2442 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 NME2P22392 152 aa4.66□□□□□ -1.66
VPS13D-213ENST00000613099 FKBP2P26885 142 aaKnown RBP4.66□□□□□ -1.66
VPS13D-213ENST00000613099 TP53I13Q8NBR0 393 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms