RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 WFIKKN1Q96NZ8 548 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 SIX6O95475 246 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 MZT1Q08AG7 82 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 GRINAQ7Z429 371 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 KIAA0907Q7Z7F0 614 aaPredicted RBP8.26□□□□□ -1.09
TTC28-208ENST00000612946 RNF113BQ8IZP6 322 aaKnown RBP8.26□□□□□ -1.09
TTC28-208ENST00000612946 C1orf127Q8N9H9 656 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 OR1S2Q8NGQ3 325 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 C16orf78Q8WTQ4 265 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 SOCS4Q8WXH5 440 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 FBXO10Q9UK96 956 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 LAMB2P55268 1798 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 TMEM218A2RU14 115 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 GJE1A6NN92 205 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 B4DXG7 233 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 CTDSP2O14595 271 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 B4GAT1O43505 415 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 HPNP05981 417 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 ACSM4P0C7M7 580 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 TGM1P22735 817 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 MRPL49Q13405 166 aaKnown RBP8.26□□□□□ -1.09
TTC28-208ENST00000612946 CLIP3Q96DZ5 547 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 C1orf74Q96LT6 269 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 LDAHQ9H6V9 325 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 ACSS2Q9NR19 701 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 CENPMQ9NSP4 180 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 PCDHAC2Q9Y5I4 1007 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 ZNFX1Q9P2E3 1918 aaKnown RBP8.26□□□□□ -1.09
TTC28-208ENST00000612946 A0A087X0M5 115 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 A0A1B0GX30 115 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 CR2P20023 1033 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 CLRN1P58418 232 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 ADARB1P78563 741 aaKnown RBP8.26□□□□□ -1.09
TTC28-208ENST00000612946 EXOSC6Q5RKV6 272 aaKnown RBP8.26□□□□□ -1.09
TTC28-208ENST00000612946 FOXB2Q5VYV0 432 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 ABHD15Q6UXT9 468 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 PQLC3Q8N755 202 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 WFIKKN2Q8TEU8 576 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 EXTL1Q92935 676 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 CXorf58Q96LI9 332 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 GALPQ9UBC7 116 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 A0A1W2PPV4 95 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 GPR25O00155 361 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 LTBQ06643 244 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 ILKQ13418 452 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 BTG3Q14201 252 aaPredicted RBP8.26□□□□□ -1.09
TTC28-208ENST00000612946 GLYR1Q49A26 553 aaPredicted RBP8.26□□□□□ -1.09
TTC28-208ENST00000612946 COX19Q49B96 90 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 CES4AQ5XG92 561 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 OR2T2Q6IF00 324 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 KRTCAP2Q8N6L1 136 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 OR6F1Q8NGZ6 308 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 SLC35B4Q969S0 331 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 FGGYQ96C11 551 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 TRMT2BQ96GJ1 504 aaKnown RBP8.26□□□□□ -1.09
TTC28-208ENST00000612946 BET1LQ9NYM9 111 aa8.26□□□□□ -1.09
TTC28-208ENST00000612946 KITLGP21583 273 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 GJA5P36382 358 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 SUOXP51687 545 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 TRA2BP62995 288 aaKnown RBP8.25□□□□□ -1.09
TTC28-208ENST00000612946 ACSM3Q53FZ2 586 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 PRAMEF8Q5VWM4 474 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 PRAMEF7Q5VXH5 474 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 CGB2Q6NT52 195 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 NRMQ8IXM6 262 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 OR6N2Q8NGY6 317 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 ANKRD9Q96BM1 317 aaPredicted RBP8.25□□□□□ -1.09
TTC28-208ENST00000612946 FYTTD1Q96QD9 318 aaKnown RBP8.25□□□□□ -1.09
TTC28-208ENST00000612946 HMSDA8MTL9 139 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 A8MU76 341 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 ANKRD66B4E2M5 251 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 SMAD9O15198 467 aaKnown RBP8.25□□□□□ -1.09
TTC28-208ENST00000612946 SURF4O15260 269 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 NDUFB2O95178 105 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 PTBP3O95758 552 aaKnown RBP8.25□□□□□ -1.09
TTC28-208ENST00000612946 MAS1P04201 325 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 IVDP26440 423 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 MEP1BQ16820 701 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 OR9K2Q8NGE7 335 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 OR5AK3PQ8NH89 298 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 GJD4Q96KN9 370 aaPredicted RBP8.25□□□□□ -1.09
TTC28-208ENST00000612946 MS4A4EQ96PG1 132 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 GABARAPL3Q9BY60 117 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 PRRG4Q9BZD6 226 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 RALGAPA1Q6GYQ0 2036 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 CD300LBA8K4G0 201 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 FTCDNL1E5RQL4 147 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 RRASP10301 218 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 CRABP1P29762 137 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 MALLQ13021 153 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 AGTRAPQ6RW13 159 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.25□□□□□ -1.09
TTC28-208ENST00000612946 OR5D14Q8NGL3 314 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 P2RX7Q99572 595 aaKnown RBP8.25□□□□□ -1.09
TTC28-208ENST00000612946 ENKD1Q9H0I2 346 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 ZNF395Q9H8N7 513 aaPredicted RBP8.25□□□□□ -1.09
TTC28-208ENST00000612946 RNF11Q9Y3C5 154 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 LOC730098B7Z3J9 87 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 DVL2O14641 736 aa8.25□□□□□ -1.09
TTC28-208ENST00000612946 ZNF133P52736 654 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms