RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 PTCHD1Q96NR3 888 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 SYNDIG1Q9H7V2 258 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 SLC28A3Q9HAS3 691 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 EVA1BQ9NVM1 165 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 A0A0G2JK05 382 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 A0A1W2PQF6 199 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 ADAM11O75078 769 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 SLC2A5P22732 501 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 SLC6A1P30531 599 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 LSSP48449 732 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 KIAA1024LP59773 190 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 RPL13AP3Q6NVV1 102 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 OAFQ86UD1 273 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 GPR135Q8IZ08 494 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 DNAJC5GQ8N7S2 189 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 OR5J2Q8NH18 312 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 OR4C6Q8NH72 309 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 SMPDL3BQ92485 455 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 RFT1Q96AA3 541 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 PGLYRP3Q96LB9 341 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 ZFYVE21Q9BQ24 234 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 IL21RQ9HBE5 538 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 ING3Q9NXR8 418 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 PCOLCE2Q9UKZ9 415 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 A0A087WV62 115 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 A6NCN8 305 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 CYR61O00622 381 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 EEF1E1O43324 174 aaKnown RBP18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 BRINP1O60477 761 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 C1QBP02746 253 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 ZNF10P21506 573 aaPredicted RBP18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 MGAT2Q10469 447 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 LIX1LQ8IVB5 337 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 GPALPP1Q8IXQ4 340 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 CREB3L1Q96BA8 519 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 WDR92Q96MX6 357 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 TNFRSF13CQ96RJ3 184 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 ABHD1Q96SE0 405 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 STACQ99469 402 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 ERVMER34-1Q9H9K5 563 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 LYRM4Q9HD34 91 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 INPP5EQ9NRR6 644 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 FLRT3Q9NZU0 649 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 TMEM5Q9Y2B1 443 aa18.69■□□□□ 0.58
SHKBP1-225ENST00000600733 SLC9B1P1A6NJY1 282 aa18.68■□□□□ 0.58
SHKBP1-225ENST00000600733 MAGEB4O15481 346 aaPredicted RBP18.68■□□□□ 0.58
SHKBP1-225ENST00000600733 AKR7A2O43488 359 aa18.68■□□□□ 0.58
SHKBP1-225ENST00000600733 FMO6PO60774 539 aa18.68■□□□□ 0.58
SHKBP1-225ENST00000600733 PTP4A3O75365 173 aa18.68■□□□□ 0.58
SHKBP1-225ENST00000600733 GPR75O95800 540 aa18.68■□□□□ 0.58
SHKBP1-225ENST00000600733 NGFRP08138 427 aa18.68■□□□□ 0.58
SHKBP1-225ENST00000600733 PRKCAP17252 672 aa18.68■□□□□ 0.58
SHKBP1-225ENST00000600733 PYCR1P32322 319 aa18.68■□□□□ 0.58
SHKBP1-225ENST00000600733 PITPNBP48739 271 aa18.68■□□□□ 0.58
SHKBP1-225ENST00000600733 HCCSP53701 268 aa18.68■□□□□ 0.58
SHKBP1-225ENST00000600733 ATP12AP54707 1039 aa18.68■□□□□ 0.58
SHKBP1-225ENST00000600733 SNRPD2P62316 118 aaKnown RBP18.68■□□□□ 0.58
SHKBP1-225ENST00000600733 POU6F2P78424 691 aaPredicted RBP18.68■□□□□ 0.58
SHKBP1-225ENST00000600733 TMEM31Q5JXX7 168 aa18.68■□□□□ 0.58
SHKBP1-225ENST00000600733 FAAH2Q6GMR7 532 aa18.68■□□□□ 0.58
SHKBP1-225ENST00000600733 TRMT10AQ8TBZ6 339 aaKnown RBP18.68■□□□□ 0.58
SHKBP1-225ENST00000600733 RERGQ96A58 199 aaPredicted RBP18.68■□□□□ 0.58
SHKBP1-225ENST00000600733 KCTD12Q96CX2 325 aaKnown RBP18.68■□□□□ 0.58
SHKBP1-225ENST00000600733 BMFQ96LC9 184 aa18.68■□□□□ 0.58
SHKBP1-225ENST00000600733 ABCG5Q9H222 651 aa18.68■□□□□ 0.58
SHKBP1-225ENST00000600733 STARD5Q9NSY2 213 aa18.68■□□□□ 0.58
SHKBP1-225ENST00000600733 CLEC4AQ9UMR7 237 aa18.68■□□□□ 0.58
SHKBP1-225ENST00000600733 A0A1W2PPK0 400 aa18.67■□□□□ 0.58
SHKBP1-225ENST00000600733 HOXB2P14652 356 aa18.67■□□□□ 0.58
SHKBP1-225ENST00000600733 ZNF3P17036 446 aa18.67■□□□□ 0.58
SHKBP1-225ENST00000600733 NPR2P20594 1047 aa18.67■□□□□ 0.58
SHKBP1-225ENST00000600733 RBMS1P29558 406 aaKnown RBP18.67■□□□□ 0.58
SHKBP1-225ENST00000600733 ACSL1P33121 698 aa18.67■□□□□ 0.58
SHKBP1-225ENST00000600733 TNFRSF4P43489 277 aa18.67■□□□□ 0.58
SHKBP1-225ENST00000600733 SRP9P49458 86 aaKnown RBP18.67■□□□□ 0.58
SHKBP1-225ENST00000600733 DGAT2L6Q6ZPD8 337 aa18.67■□□□□ 0.58
SHKBP1-225ENST00000600733 SFTPA2Q8IWL1 248 aa18.67■□□□□ 0.58
SHKBP1-225ENST00000600733 SLC44A3Q8N4M1 653 aa18.67■□□□□ 0.58
SHKBP1-225ENST00000600733 TMEM27Q9HBJ8 222 aa18.67■□□□□ 0.58
SHKBP1-225ENST00000600733 A0A0B4J2E0 115 aa18.67■□□□□ 0.58
SHKBP1-225ENST00000600733 A0A1B0GX12 115 aa18.67■□□□□ 0.58
SHKBP1-225ENST00000600733 A0A1W2PRG6 482 aa18.67■□□□□ 0.58
SHKBP1-225ENST00000600733 SC5DO75845 299 aa18.67■□□□□ 0.58
SHKBP1-225ENST00000600733 MAP3K8P41279 467 aa18.67■□□□□ 0.58
SHKBP1-225ENST00000600733 ACSM3Q53FZ2 586 aa18.67■□□□□ 0.58
SHKBP1-225ENST00000600733 PLA1AQ53H76 456 aa18.67■□□□□ 0.58
SHKBP1-225ENST00000600733 KRT74Q7RTS7 529 aa18.67■□□□□ 0.58
SHKBP1-225ENST00000600733 PXKQ7Z7A4 578 aa18.67■□□□□ 0.58
SHKBP1-225ENST00000600733 SYT9Q86SS6 491 aa18.67■□□□□ 0.58
SHKBP1-225ENST00000600733 CADM2Q8N3J6 435 aa18.67■□□□□ 0.58
SHKBP1-225ENST00000600733 ARL14Q8N4G2 192 aa18.67■□□□□ 0.58
SHKBP1-225ENST00000600733 GRPEL2Q8TAA5 225 aa18.67■□□□□ 0.58
SHKBP1-225ENST00000600733 GHSRQ92847 366 aa18.67■□□□□ 0.58
SHKBP1-225ENST00000600733 NIPAL2Q9H841 368 aa18.67■□□□□ 0.58
SHKBP1-225ENST00000600733 EYSQ5T1H1 3165 aa18.66■□□□□ 0.58
SHKBP1-225ENST00000600733 A0A1B0GWA3 101 aa18.66■□□□□ 0.58
SHKBP1-225ENST00000600733 ZNF780AO75290 641 aaPredicted RBP18.66■□□□□ 0.58
SHKBP1-225ENST00000600733 EMDP50402 254 aa18.66■□□□□ 0.58
SHKBP1-225ENST00000600733 TNK1Q13470 666 aa18.66■□□□□ 0.58
SHKBP1-225ENST00000600733 ZNF613Q6PF04 617 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms