RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 RFWD2Q8NHY2 731 aa15.7■□□□□ 0.1
SHKBP1-203ENST00000594298 VPS33AQ96AX1 596 aa15.7■□□□□ 0.1
SHKBP1-203ENST00000594298 ZC3HAV1LQ96H79 300 aaKnown RBP15.7■□□□□ 0.1
SHKBP1-203ENST00000594298 KLHL4Q9C0H6 718 aa15.7■□□□□ 0.1
SHKBP1-203ENST00000594298 NMUR2Q9GZQ4 415 aa15.7■□□□□ 0.1
SHKBP1-203ENST00000594298 SERHL2Q9H4I8 314 aa15.7■□□□□ 0.1
SHKBP1-203ENST00000594298 CCDC134Q9H6E4 229 aa15.7■□□□□ 0.1
SHKBP1-203ENST00000594298 PAQR5Q9NXK6 330 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-203ENST00000594298 CCDC167Q9P0B6 97 aa15.7■□□□□ 0.1
SHKBP1-203ENST00000594298 EMC9Q9Y3B6 208 aa15.7■□□□□ 0.1
SHKBP1-203ENST00000594298 DTNAQ9Y4J8 743 aa15.7■□□□□ 0.1
SHKBP1-203ENST00000594298 A0A087WZY1 265 aa15.69■□□□□ 0.1
SHKBP1-203ENST00000594298 TRIM64A6NGJ6 449 aa15.69■□□□□ 0.1
SHKBP1-203ENST00000594298 TRIM64BA6NI03 449 aa15.69■□□□□ 0.1
SHKBP1-203ENST00000594298 GTPBP1O00178 669 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-203ENST00000594298 SS18L1O75177 396 aaPredicted RBP15.69■□□□□ 0.1
SHKBP1-203ENST00000594298 THBDP07204 575 aa15.69■□□□□ 0.1
SHKBP1-203ENST00000594298 CASP9P55211 416 aa15.69■□□□□ 0.1
SHKBP1-203ENST00000594298 AGKQ53H12 422 aa15.69■□□□□ 0.1
SHKBP1-203ENST00000594298 KLHL26Q53HC5 615 aa15.69■□□□□ 0.1
SHKBP1-203ENST00000594298 BEX5Q5H9J7 111 aa15.69■□□□□ 0.1
SHKBP1-203ENST00000594298 ANKRD34AQ69YU3 496 aa15.69■□□□□ 0.1
SHKBP1-203ENST00000594298 PLEKHM3Q6ZWE6 761 aa15.69■□□□□ 0.1
SHKBP1-203ENST00000594298 PHOSPHO1Q8TCT1 267 aa15.69■□□□□ 0.1
SHKBP1-203ENST00000594298 ZFP90Q8TF47 636 aa15.69■□□□□ 0.1
SHKBP1-203ENST00000594298 GTF2H4Q92759 462 aa15.69■□□□□ 0.1
SHKBP1-203ENST00000594298 ROPN1LQ96C74 230 aa15.69■□□□□ 0.1
SHKBP1-203ENST00000594298 SPDL1Q96EA4 605 aa15.69■□□□□ 0.1
SHKBP1-203ENST00000594298 GMPPAQ96IJ6 420 aaPredicted RBP15.69■□□□□ 0.1
SHKBP1-203ENST00000594298 RAD21L1Q9H4I0 556 aa15.69■□□□□ 0.1
SHKBP1-203ENST00000594298 FGFR1OP2Q9NVK5 253 aa15.69■□□□□ 0.1
SHKBP1-203ENST00000594298 THUMPD1Q9NXG2 353 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-203ENST00000594298 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.68■□□□□ 0.1
SHKBP1-203ENST00000594298 NR5A2O00482 541 aa15.68■□□□□ 0.1
SHKBP1-203ENST00000594298 SMAD7O15105 426 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-203ENST00000594298 KLF4O43474 513 aa15.68■□□□□ 0.1
SHKBP1-203ENST00000594298 EIF1AXP47813 144 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-203ENST00000594298 SLC6A8P48029 635 aa15.68■□□□□ 0.1
SHKBP1-203ENST00000594298 ARFIP2P53365 341 aa15.68■□□□□ 0.1
SHKBP1-203ENST00000594298 NR1H2P55055 460 aa15.68■□□□□ 0.1
SHKBP1-203ENST00000594298 GPR68Q15743 365 aa15.68■□□□□ 0.1
SHKBP1-203ENST00000594298 GPAT3Q53EU6 434 aa15.68■□□□□ 0.1
SHKBP1-203ENST00000594298 STAC2Q6ZMT1 411 aa15.68■□□□□ 0.1
SHKBP1-203ENST00000594298 FUNDC1Q8IVP5 155 aa15.68■□□□□ 0.1
SHKBP1-203ENST00000594298 ZNF614Q8N883 585 aa15.68■□□□□ 0.1
SHKBP1-203ENST00000594298 GATSQ8NAP1 163 aa15.68■□□□□ 0.1
SHKBP1-203ENST00000594298 B4GALNT2Q8NHY0 566 aa15.68■□□□□ 0.1
SHKBP1-203ENST00000594298 PMM1Q92871 262 aa15.68■□□□□ 0.1
SHKBP1-203ENST00000594298 RAB8BQ92930 207 aa15.68■□□□□ 0.1
SHKBP1-203ENST00000594298 ADGRG7Q96K78 797 aa15.68■□□□□ 0.1
SHKBP1-203ENST00000594298 TRNT1Q96Q11 434 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-203ENST00000594298 TMEM120AQ9BXJ8 343 aa15.68■□□□□ 0.1
SHKBP1-203ENST00000594298 ZNF350Q9GZX5 532 aa15.68■□□□□ 0.1
SHKBP1-203ENST00000594298 OR10A4Q9H209 315 aa15.68■□□□□ 0.1
SHKBP1-203ENST00000594298 TPT1P8Q9HAU6 139 aa15.68■□□□□ 0.1
SHKBP1-203ENST00000594298 GLRX2Q9NS18 164 aa15.68■□□□□ 0.1
SHKBP1-203ENST00000594298 ZNF701Q9NV72 531 aaPredicted RBP15.68■□□□□ 0.1
SHKBP1-203ENST00000594298 WDR45Q9Y484 360 aa15.68■□□□□ 0.1
SHKBP1-203ENST00000594298 RAI1Q7Z5J4 1906 aaPredicted RBP15.68■□□□□ 0.1
SHKBP1-203ENST00000594298 A0A096LPI6 279 aa15.67■□□□□ 0.1
SHKBP1-203ENST00000594298 C7orf72A4D263 438 aa15.67■□□□□ 0.1
SHKBP1-203ENST00000594298 TMEM247A6NEH6 219 aa15.67■□□□□ 0.1
SHKBP1-203ENST00000594298 NPIPB9F8W1W9 429 aa15.67■□□□□ 0.1
SHKBP1-203ENST00000594298 HMGN4O00479 90 aa15.67■□□□□ 0.1
SHKBP1-203ENST00000594298 EIF1AYO14602 144 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-203ENST00000594298 ADAMDEC1O15204 470 aa15.67■□□□□ 0.1
SHKBP1-203ENST00000594298 EIF4E2O60573 245 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-203ENST00000594298 CNOT4O95628 575 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-203ENST00000594298 PCSK6P29122 969 aa15.67■□□□□ 0.1
SHKBP1-203ENST00000594298 CRATP43155 626 aa15.67■□□□□ 0.1
SHKBP1-203ENST00000594298 ZNF41P51814 821 aaPredicted RBP15.67■□□□□ 0.1
SHKBP1-203ENST00000594298 ZNF141Q15928 474 aa15.67■□□□□ 0.1
SHKBP1-203ENST00000594298 EXOC3L2Q2M3D2 409 aa15.67■□□□□ 0.1
SHKBP1-203ENST00000594298 CTU2Q2VPK5 515 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-203ENST00000594298 AP1ARQ63HQ0 302 aa15.67■□□□□ 0.1
SHKBP1-203ENST00000594298 DNAJC14Q6Y2X3 702 aaPredicted RBP15.67■□□□□ 0.1
SHKBP1-203ENST00000594298 ZNF704Q6ZNC4 412 aaPredicted RBP15.67■□□□□ 0.1
SHKBP1-203ENST00000594298 GTPBP8Q8N3Z3 284 aaPredicted RBP15.67■□□□□ 0.1
SHKBP1-203ENST00000594298 OR10D3Q8NH80 312 aa15.67■□□□□ 0.1
SHKBP1-203ENST00000594298 TMEM204Q9BSN7 226 aa15.67■□□□□ 0.1
SHKBP1-203ENST00000594298 PRRG4Q9BZD6 226 aa15.67■□□□□ 0.1
SHKBP1-203ENST00000594298 FANCFQ9NPI8 374 aa15.67■□□□□ 0.1
SHKBP1-203ENST00000594298 MKLN1Q9UL63 735 aa15.67■□□□□ 0.1
SHKBP1-203ENST00000594298 VDAC3Q9Y277 283 aa15.67■□□□□ 0.1
SHKBP1-203ENST00000594298 NPIPA5A0A0B4J1W7 369 aa15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 A0A1W2PP18 115 aa15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 SERINC4A6NH21 518 aa15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 KIAA1324LA8MWY0 1029 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 SHISA8B8ZZ34 492 aa15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 NPIPA7E9PJI5 369 aa15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 FCMRO60667 390 aa15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 PLGP00747 810 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 NPIPA8P0DM63 369 aa15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 NR2F1P10589 423 aa15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 PPIBP23284 216 aaKnown RBP15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 PSMA4P25789 261 aaKnown RBP15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 P2RX1P51575 399 aa15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 SUMO3P55854 103 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 CTBP2P56545 445 aa15.66■□□□□ 0.1
SHKBP1-203ENST00000594298 GNA13Q14344 377 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms