RNA–Protein interactions for RNA: ENST00000593099.5

LIG3-216, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 4,664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-216ENST00000593099 MAN2A2P49641 1150 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 DAP3P51398 398 aaKnown RBP9.11□□□□□ -0.95
LIG3-216ENST00000593099 NUDT6P53370 316 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 PCBP4P57723 403 aaKnown RBP9.11□□□□□ -0.95
LIG3-216ENST00000593099 OR8J1Q8NGP2 316 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 FCGR1BQ92637 280 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 UNC13CQ8NB66 2214 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 TTC28Q96AY4 2481 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 FBP2O00757 339 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 EIF4E2O60573 245 aaKnown RBP9.11□□□□□ -0.95
LIG3-216ENST00000593099 CA5AP35218 305 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 OMPP47874 163 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 POLR2HP52434 150 aaKnown RBP9.11□□□□□ -0.95
LIG3-216ENST00000593099 SSPNQ14714 243 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 TRIQKQ629K1 86 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 OGFOD3Q6PK18 319 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 PLEKHG7Q6ZR37 379 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 THRSPQ92748 146 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 CSF3RQ99062 836 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 DPH1Q9BZG8 443 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 A4GALTQ9NPC4 353 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 GPR83Q9NYM4 423 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 KLHL21Q9UJP4 597 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 A0A0A6YYD5 115 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 CRYZL1O95825 349 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 MAP3K8P41279 467 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 MLLT10P55197 1068 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 KCNAB2Q13303 367 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 SELPLGQ14242 412 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 ARL9Q6T311 187 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 TMPRSS9Q7Z410 1059 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 VN1R4Q7Z5H5 301 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 PARP8Q8N3A8 854 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 OR7G2Q8NG99 324 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 C16orf52Q8NHV5 167 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 RBM24Q9BX46 236 aaKnown RBP9.11□□□□□ -0.95
LIG3-216ENST00000593099 TCF7L1Q9HCS4 588 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 PCDHGB5Q9Y5G0 923 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 PCDHGB2Q9Y5G2 931 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 SYT5O00445 386 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 HPRP00739 348 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 GPX2P18283 190 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 PRPH2P23942 346 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 TACR3P29371 465 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 RGS6P49758 472 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 AIMP2Q13155 320 aaKnown RBP9.11□□□□□ -0.95
LIG3-216ENST00000593099 ENTPD8Q5MY95 495 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 QSOX2Q6ZRP7 698 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 KCTD8Q6ZWB6 473 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 FUNDC1Q8IVP5 155 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 DNAJC22Q8N4W6 341 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 OR52E2Q8NGJ4 325 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 GPR87Q9BY21 358 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 VN1R1Q9GZP7 353 aa9.11□□□□□ -0.95
LIG3-216ENST00000593099 A0A1B0GVI7 797 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 APOC1P02654 83 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 EDNRAP25101 427 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 PRKAR1BP31321 381 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 STARP49675 285 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 DEFA6Q01524 100 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 CBLBQ13191 982 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 CCNIQ14094 377 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 NDUFAF6Q330K2 333 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 MARCH3Q86UD3 253 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 TMPRSS12Q86WS5 348 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 ERI1Q8IV48 349 aaKnown RBP9.1□□□□□ -0.95
LIG3-216ENST00000593099 OR4K13Q8NH42 304 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 BPIFA2Q96DR5 249 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 RADILQ96JH8 1075 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 NMNAT1Q9HAN9 279 aaPredicted RBP9.1□□□□□ -0.95
LIG3-216ENST00000593099 PARPBPQ9NWS1 579 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 PCDHGA1Q9Y5H4 931 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 CACNA1HO95180 2353 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 FAM166BA8MTA8 275 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 B4E171 279 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 H0YJX3 145 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 J3QLW9 94 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 H2BFMP0C1H6 154 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 ZNF12P17014 697 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 ZNF19P17023 458 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 IL12AP29459 219 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 CPOXP36551 454 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 TSPAN7P41732 249 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 TPTEP56180 551 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 GPR85P60893 370 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 MS4A2Q01362 244 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 RELAQ04206 551 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 GPR107Q5VW38 600 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 FBXO27Q8NI29 283 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 NSMAFQ92636 917 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 YTHDF1Q9BYJ9 559 aaKnown RBP9.1□□□□□ -0.95
LIG3-216ENST00000593099 QRSL1Q9H0R6 528 aaKnown RBP9.1□□□□□ -0.95
LIG3-216ENST00000593099 TMEM38AQ9H6F2 299 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 ANKRA2Q9H9E1 313 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 INIPQ9NRY2 104 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 C2orf42Q9NWW7 574 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 MED11Q9P086 117 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 SLC22A31A6NKX4 558 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 FTCDNL1E5RQL4 147 aa9.1□□□□□ -0.95
LIG3-216ENST00000593099 ZNF883P0CG24 379 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms