RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 CDK5Q00535 292 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 COMMD6Q7Z4G1 85 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 ZNF546Q86UE3 836 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 DCUN1D3Q8IWE4 304 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 TMEM86AQ8N2M4 240 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 MUC20Q8N307 709 aaPredicted RBP14.1□□□□□ -0.15
CIRBP-228ENST00000590347 RFLNBQ8N5W9 214 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 ZNF740Q8NDX6 193 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 OR8S1Q8NH09 359 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 RGMAQ96B86 450 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 C14orf79Q96F83 325 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 NAA11Q9BSU3 229 aaPredicted RBP14.1□□□□□ -0.15
CIRBP-228ENST00000590347 SLC6A16Q9GZN6 736 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 OR51M1Q9H341 326 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 BACE2Q9Y5Z0 518 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 OR2AG2A6NM03 316 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 SERPIND1P05546 499 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 IL3P08700 152 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 GCGRP47871 477 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 KLHL26Q53HC5 615 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 CLLU1OSQ5K130 101 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 GLB1LQ6UWU2 654 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 NUBPLQ8TB37 319 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 DVL3Q92997 716 aaPredicted RBP14.1□□□□□ -0.15
CIRBP-228ENST00000590347 ZNF649Q9BS31 505 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 SYNPO2LQ9H987 977 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 ZFYVE1Q9HBF4 777 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 BARX1Q9HBU1 254 aaPredicted RBP14.1□□□□□ -0.15
CIRBP-228ENST00000590347 MAN2C1Q9NTJ4 1040 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 GPN3Q9UHW5 284 aaPredicted RBP14.1□□□□□ -0.15
CIRBP-228ENST00000590347 A0A087WUU8 490 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 DAPL1A0PJW8 107 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 TMEM202A6NGA9 273 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 A8MVJ9 347 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 F5H5T6 163 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 IFNA4P05014 189 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 GP1BAP07359 652 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 APEHP13798 732 aaKnown RBP14.1□□□□□ -0.15
CIRBP-228ENST00000590347 DAOP14920 347 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 OR2B8PP59922 312 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 RNF219Q5W0B1 726 aaPredicted RBP14.1□□□□□ -0.15
CIRBP-228ENST00000590347 B3GNTL1Q67FW5 361 aaPredicted RBP14.1□□□□□ -0.15
CIRBP-228ENST00000590347 LIN54Q6MZP7 749 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 THOC6Q86W42 341 aaKnown RBP14.1□□□□□ -0.15
CIRBP-228ENST00000590347 ZNF565Q8N9K5 539 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 CYB561A3Q8NBI2 242 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 ARL5BQ96KC2 179 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 TEFMQ96QE5 360 aaKnown RBP14.1□□□□□ -0.15
CIRBP-228ENST00000590347 REEP4Q9H6H4 257 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 MIEF1Q9NQG6 463 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 MARK1Q9P0L2 795 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 FBXL4Q9UKA2 621 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 SH2B3Q9UQQ2 575 aa14.1□□□□□ -0.15
CIRBP-228ENST00000590347 C5orf42Q9H799 3197 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 A0A087WV48 116 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 TMEM272A0A1B0GTI8 110 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 A0A1B0GUH1 482 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 SNAPINO95295 136 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 TMIGD3P0DMS9 266 aaPredicted RBP14.09□□□□□ -0.15
CIRBP-228ENST00000590347 ST6GAL1P15907 406 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 TIA1P31483 386 aaKnown RBP eCLIP14.09□□□□□ -0.158e-8■■□□□ 14.4
CIRBP-228ENST00000590347 TM4SF4P48230 202 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 C4orf46Q504U0 113 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 FIGNL1Q6PIW4 674 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 UNQ6494/PRO21346Q6UXR6 183 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 IL17RCQ8NAC3 791 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 OR51L1Q8NGJ5 315 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 GOT1L1Q8NHS2 421 aaPredicted RBP14.09□□□□□ -0.15
CIRBP-228ENST00000590347 UBTD2Q8WUN7 234 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 APOBEC4Q8WW27 367 aaKnown RBP14.09□□□□□ -0.15
CIRBP-228ENST00000590347 FBXO32Q969P5 355 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 MRPS30Q9NP92 439 aaKnown RBP14.09□□□□□ -0.15
CIRBP-228ENST00000590347 DZANK1Q9NVP4 752 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 OR6C65A6NJZ3 312 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 RNASET2O00584 256 aaKnown RBP14.09□□□□□ -0.15
CIRBP-228ENST00000590347 CLN5O75503 358 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 PAK4O96013 591 aaPredicted RBP14.09□□□□□ -0.15
CIRBP-228ENST00000590347 STATHP02808 62 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 H2AFB1P0C5Y9 115 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 SMIM6P0DI80 62 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 CD9P21926 228 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 ACRV1P26436 265 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 MPGP29372 298 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 TAF10Q12962 218 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 CSRP2Q16527 193 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 CCDC157Q569K6 752 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 FCRLAQ7L513 359 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 TMCO2Q7Z6W1 182 aaPredicted RBP14.09□□□□□ -0.15
CIRBP-228ENST00000590347 TMED4Q7Z7H5 227 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 THEM5Q8N1Q8 247 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 SMPDL3BQ92485 455 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 C4orf36Q96KX1 117 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 NRTNQ99748 197 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 ACBD6Q9BR61 282 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 TRMT61BQ9BVS5 477 aaKnown RBP14.09□□□□□ -0.15
CIRBP-228ENST00000590347 ZNF334Q9HCZ1 680 aaPredicted RBP14.09□□□□□ -0.15
CIRBP-228ENST00000590347 ZFP57Q9NU63 452 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 ATG4BQ9Y4P1 393 aa14.09□□□□□ -0.15
CIRBP-228ENST00000590347 SYT5O00445 386 aa14.08□□□□□ -0.15
CIRBP-228ENST00000590347 EPXP11678 715 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms