RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 TESK1Q15569 626 aa17.48■□□□□ 0.39
TPM4-208ENST00000588410 SYPL1Q16563 259 aa17.48■□□□□ 0.39
TPM4-208ENST00000588410 TTMPQ5BVD1 217 aa17.48■□□□□ 0.39
TPM4-208ENST00000588410 TMEM201Q5SNT2 666 aa17.48■□□□□ 0.39
TPM4-208ENST00000588410 AP1ARQ63HQ0 302 aa17.48■□□□□ 0.39
TPM4-208ENST00000588410 LRRC74BQ6ZQY2 392 aa17.48■□□□□ 0.39
TPM4-208ENST00000588410 MSANTD1Q6ZTZ1 278 aa17.48■□□□□ 0.39
TPM4-208ENST00000588410 HMGN2P46Q86SG4 172 aa17.48■□□□□ 0.39
TPM4-208ENST00000588410 ARFGAP2Q8N6H7 521 aa17.48■□□□□ 0.39
TPM4-208ENST00000588410 RNF128Q8TEB7 428 aa17.48■□□□□ 0.39
TPM4-208ENST00000588410 WFIKKN1Q96NZ8 548 aa17.48■□□□□ 0.39
TPM4-208ENST00000588410 SRXN1Q9BYN0 137 aa17.48■□□□□ 0.39
TPM4-208ENST00000588410 QRSL1Q9H0R6 528 aaKnown RBP17.48■□□□□ 0.39
TPM4-208ENST00000588410 LIME1Q9H400 295 aa17.48■□□□□ 0.39
TPM4-208ENST00000588410 CCM2LQ9NUG4 571 aaPredicted RBP17.48■□□□□ 0.39
TPM4-208ENST00000588410 ACER3Q9NUN7 267 aa17.48■□□□□ 0.39
TPM4-208ENST00000588410 POLQO75417 2590 aa17.48■□□□□ 0.39
TPM4-208ENST00000588410 CSMD2Q7Z408 3487 aa17.47■□□□□ 0.39
TPM4-208ENST00000588410 FAM234BA2RU67 622 aa17.47■□□□□ 0.39
TPM4-208ENST00000588410 PRAMEF27A3QJZ7 478 aa17.47■□□□□ 0.39
TPM4-208ENST00000588410 DNAJA2O60884 412 aa17.47■□□□□ 0.39
TPM4-208ENST00000588410 PRKD3O94806 890 aa17.47■□□□□ 0.39
TPM4-208ENST00000588410 TGDSO95455 350 aa17.47■□□□□ 0.39
TPM4-208ENST00000588410 HRGP04196 525 aa17.47■□□□□ 0.39
TPM4-208ENST00000588410 CRATP43155 626 aa17.47■□□□□ 0.39
TPM4-208ENST00000588410 MAGEA8P43361 318 aa17.47■□□□□ 0.39
TPM4-208ENST00000588410 COX20Q5RI15 118 aa17.47■□□□□ 0.39
TPM4-208ENST00000588410 C6orf10Q5SRN2 563 aa17.47■□□□□ 0.39
TPM4-208ENST00000588410 FCRLAQ7L513 359 aa17.47■□□□□ 0.39
TPM4-208ENST00000588410 ZNF524Q96C55 264 aa17.47■□□□□ 0.39
TPM4-208ENST00000588410 ZG16BQ96DA0 208 aa17.47■□□□□ 0.39
TPM4-208ENST00000588410 OR5B2Q96R09 309 aa17.47■□□□□ 0.39
TPM4-208ENST00000588410 C12orf49Q9H741 205 aa17.47■□□□□ 0.39
TPM4-208ENST00000588410 COQ10BQ9H8M1 238 aa17.47■□□□□ 0.39
TPM4-208ENST00000588410 MTHFD2LQ9H903 347 aaPredicted RBP17.47■□□□□ 0.39
TPM4-208ENST00000588410 TCF7L2Q9NQB0 619 aa17.47■□□□□ 0.39
TPM4-208ENST00000588410 PLEKHA6Q9Y2H5 1048 aa17.47■□□□□ 0.39
TPM4-208ENST00000588410 SPIN1Q9Y657 262 aaPredicted RBP17.47■□□□□ 0.39
TPM4-208ENST00000588410 ANKHD1Q8IWZ3 2542 aaKnown RBP17.46■□□□□ 0.39
TPM4-208ENST00000588410 A0A1W2PNR3 127 aa17.46■□□□□ 0.39
TPM4-208ENST00000588410 HMGB1P1B2RPK0 211 aaPredicted RBP17.46■□□□□ 0.39
TPM4-208ENST00000588410 CHRM4P08173 479 aa17.46■□□□□ 0.39
TPM4-208ENST00000588410 ZCCHC18P0CG32 403 aa17.46■□□□□ 0.39
TPM4-208ENST00000588410 AGTR1P30556 359 aa17.46■□□□□ 0.39
TPM4-208ENST00000588410 RAC3P60763 192 aa17.46■□□□□ 0.39
TPM4-208ENST00000588410 SPNS3Q6ZMD2 512 aa17.46■□□□□ 0.39
TPM4-208ENST00000588410 BEND4Q6ZU67 534 aa17.46■□□□□ 0.39
TPM4-208ENST00000588410 PLEKHM3Q6ZWE6 761 aa17.46■□□□□ 0.39
TPM4-208ENST00000588410 CMIPQ8IY22 773 aa17.46■□□□□ 0.39
TPM4-208ENST00000588410 SLC43A2Q8N370 569 aa17.46■□□□□ 0.39
TPM4-208ENST00000588410 FAM71CQ8NEG0 241 aa17.46■□□□□ 0.39
TPM4-208ENST00000588410 OR9I1Q8NGQ6 314 aa17.46■□□□□ 0.39
TPM4-208ENST00000588410 ABHD3Q8WU67 409 aa17.46■□□□□ 0.39
TPM4-208ENST00000588410 SLC25A43Q8WUT9 341 aaPredicted RBP17.46■□□□□ 0.39
TPM4-208ENST00000588410 PMM1Q92871 262 aa17.46■□□□□ 0.39
TPM4-208ENST00000588410 VPS33AQ96AX1 596 aa17.46■□□□□ 0.39
TPM4-208ENST00000588410 DOCK7Q96N67 2140 aa17.46■□□□□ 0.39
TPM4-208ENST00000588410 SLC38A1Q9H2H9 487 aa17.46■□□□□ 0.39
TPM4-208ENST00000588410 SLCO1B3Q9NPD5 702 aa17.46■□□□□ 0.39
TPM4-208ENST00000588410 EXOSC3Q9NQT5 275 aaKnown RBP17.46■□□□□ 0.39
TPM4-208ENST00000588410 INTS9Q9NV88 658 aaKnown RBP17.46■□□□□ 0.39
TPM4-208ENST00000588410 P2RX2Q9UBL9 471 aa17.46■□□□□ 0.39
TPM4-208ENST00000588410 OTOGQ6ZRI0 2925 aa17.46■□□□□ 0.39
TPM4-208ENST00000588410 TMEM247A6NEH6 219 aa17.45■□□□□ 0.38
TPM4-208ENST00000588410 AGAP5A6NIR3 686 aa17.45■□□□□ 0.38
TPM4-208ENST00000588410 TFPIP10646 304 aa17.45■□□□□ 0.38
TPM4-208ENST00000588410 IL7RP16871 459 aa17.45■□□□□ 0.38
TPM4-208ENST00000588410 ENPP1P22413 925 aa17.45■□□□□ 0.38
TPM4-208ENST00000588410 CCKARP32238 428 aa17.45■□□□□ 0.38
TPM4-208ENST00000588410 APOBEC1P41238 236 aaKnown RBP17.45■□□□□ 0.38
TPM4-208ENST00000588410 IDH3AP50213 366 aa17.45■□□□□ 0.38
TPM4-208ENST00000588410 KEAP1Q14145 624 aa17.45■□□□□ 0.38
TPM4-208ENST00000588410 ANKRD34AQ69YU3 496 aa17.45■□□□□ 0.38
TPM4-208ENST00000588410 PAMR1Q6UXH9 720 aa17.45■□□□□ 0.38
TPM4-208ENST00000588410 ZNF550Q7Z398 422 aa17.45■□□□□ 0.38
TPM4-208ENST00000588410 PEX5LQ8IYB4 626 aa17.45■□□□□ 0.38
TPM4-208ENST00000588410 WDR60Q8WVS4 1066 aa17.45■□□□□ 0.38
TPM4-208ENST00000588410 ZC3HAV1LQ96H79 300 aaKnown RBP17.45■□□□□ 0.38
TPM4-208ENST00000588410 TACO1Q9BSH4 297 aaKnown RBP17.45■□□□□ 0.38
TPM4-208ENST00000588410 VIPAS39Q9H9C1 493 aa17.45■□□□□ 0.38
TPM4-208ENST00000588410 TPT1P8Q9HAU6 139 aa17.45■□□□□ 0.38
TPM4-208ENST00000588410 CACYBPQ9HB71 228 aaKnown RBP17.45■□□□□ 0.38
TPM4-208ENST00000588410 GP6Q9HCN6 339 aa17.45■□□□□ 0.38
TPM4-208ENST00000588410 CALML5Q9NZT1 146 aa17.45■□□□□ 0.38
TPM4-208ENST00000588410 C6orf203Q9P0P8 240 aaPredicted RBP17.45■□□□□ 0.38
TPM4-208ENST00000588410 KLHL13Q9P2N7 655 aa17.45■□□□□ 0.38
TPM4-208ENST00000588410 TACC2O95359 2948 aa17.44■□□□□ 0.38
TPM4-208ENST00000588410 IGHV3-15A0A0B4J1V0 119 aa17.44■□□□□ 0.38
TPM4-208ENST00000588410 CLDN24A6NM45 220 aa17.44■□□□□ 0.38
TPM4-208ENST00000588410 BCAS1O75363 584 aaPredicted RBP17.44■□□□□ 0.38
TPM4-208ENST00000588410 RAF1P04049 648 aa17.44■□□□□ 0.38
TPM4-208ENST00000588410 DBIP07108 87 aaKnown RBP17.44■□□□□ 0.38
TPM4-208ENST00000588410 UQCRBP14927 111 aa17.44■□□□□ 0.38
TPM4-208ENST00000588410 PPP3CBP16298 524 aa17.44■□□□□ 0.38
TPM4-208ENST00000588410 AQP5P55064 265 aa17.44■□□□□ 0.38
TPM4-208ENST00000588410 DSTNP60981 165 aa17.44■□□□□ 0.38
TPM4-208ENST00000588410 CSNK2A1P68400 391 aaPredicted RBP17.44■□□□□ 0.38
TPM4-208ENST00000588410 SYT14P1Q58G82 188 aa17.44■□□□□ 0.38
TPM4-208ENST00000588410 GRINAQ7Z429 371 aa17.44■□□□□ 0.38
TPM4-208ENST00000588410 TUSC5Q8IXB3 177 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms