RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 ZIM3Q96PE6 472 aa12.42□□□□□ -0.42
ATG4D-206ENST00000586863 SDF2Q99470 211 aa12.42□□□□□ -0.42
ATG4D-206ENST00000586863 MDFIQ99750 246 aa12.42□□□□□ -0.42
ATG4D-206ENST00000586863 DUSP26Q9BV47 211 aa12.42□□□□□ -0.42
ATG4D-206ENST00000586863 POTEKPQ9BYX7 375 aa12.42□□□□□ -0.42
ATG4D-206ENST00000586863 QRSL1Q9H0R6 528 aaKnown RBP12.42□□□□□ -0.42
ATG4D-206ENST00000586863 BCO1Q9HAY6 547 aa12.42□□□□□ -0.42
ATG4D-206ENST00000586863 PRSS50Q9UI38 385 aa12.42□□□□□ -0.42
ATG4D-206ENST00000586863 KCNE5Q9UJ90 142 aa12.42□□□□□ -0.42
ATG4D-206ENST00000586863 SERINC4A6NH21 518 aa12.41□□□□□ -0.42
ATG4D-206ENST00000586863 C9JVG2 144 aa12.41□□□□□ -0.42
ATG4D-206ENST00000586863 OVOL3O00110 214 aa12.41□□□□□ -0.42
ATG4D-206ENST00000586863 SMAD9O15198 467 aaKnown RBP12.41□□□□□ -0.42
ATG4D-206ENST00000586863 EIF4E2O60573 245 aaKnown RBP12.41□□□□□ -0.42
ATG4D-206ENST00000586863 H2AFXP16104 143 aaPredicted RBP12.41□□□□□ -0.42
ATG4D-206ENST00000586863 SERPINB5P36952 375 aa12.41□□□□□ -0.42
ATG4D-206ENST00000586863 CDKN1AP38936 164 aa12.41□□□□□ -0.42
ATG4D-206ENST00000586863 OR3A2P47893 321 aa12.41□□□□□ -0.42
ATG4D-206ENST00000586863 C21orf58P58505 322 aa12.41□□□□□ -0.42
ATG4D-206ENST00000586863 RAC3P60763 192 aa12.41□□□□□ -0.42
ATG4D-206ENST00000586863 BSPH1Q075Z2 132 aa12.41□□□□□ -0.42
ATG4D-206ENST00000586863 ITGADQ13349 1161 aa12.41□□□□□ -0.42
ATG4D-206ENST00000586863 CBFBQ13951 182 aa12.41□□□□□ -0.42
ATG4D-206ENST00000586863 P2RY6Q15077 328 aa12.41□□□□□ -0.42
ATG4D-206ENST00000586863 GPR68Q15743 365 aa12.41□□□□□ -0.42
ATG4D-206ENST00000586863 TIGD2Q4W5G0 525 aa12.41□□□□□ -0.42
ATG4D-206ENST00000586863 BEND6Q5SZJ8 279 aaPredicted RBP12.41□□□□□ -0.42
ATG4D-206ENST00000586863 BHLHA15Q7RTS1 189 aaPredicted RBP12.41□□□□□ -0.42
ATG4D-206ENST00000586863 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.41□□□□□ -0.42
ATG4D-206ENST00000586863 CLECL1Q8IZS7 167 aa12.41□□□□□ -0.42
ATG4D-206ENST00000586863 SLC43A2Q8N370 569 aa12.41□□□□□ -0.42
ATG4D-206ENST00000586863 MAPK1IP1LQ8NDC0 245 aa12.41□□□□□ -0.42
ATG4D-206ENST00000586863 TOR1AIP2Q8NFQ8 470 aa12.41□□□□□ -0.42
ATG4D-206ENST00000586863 HSD17B8Q92506 261 aa12.41□□□□□ -0.42
ATG4D-206ENST00000586863 FBXW5Q969U6 566 aa12.41□□□□□ -0.42
ATG4D-206ENST00000586863 ZNF775Q96BV0 537 aaPredicted RBP12.41□□□□□ -0.42
ATG4D-206ENST00000586863 TUBGCP3Q96CW5 907 aa12.41□□□□□ -0.42
ATG4D-206ENST00000586863 ZNF300Q96RE9 604 aaPredicted RBP12.41□□□□□ -0.42
ATG4D-206ENST00000586863 PRPF18Q99633 342 aaKnown RBP12.41□□□□□ -0.42
ATG4D-206ENST00000586863 NMUR2Q9GZQ4 415 aa12.41□□□□□ -0.42
ATG4D-206ENST00000586863 ESRP2Q9H6T0 727 aaKnown RBP12.41□□□□□ -0.42
ATG4D-206ENST00000586863 KLHL9Q9P2J3 617 aa12.41□□□□□ -0.42
ATG4D-206ENST00000586863 ADAM21Q9UKJ8 722 aa12.41□□□□□ -0.42
ATG4D-206ENST00000586863 MAGED1Q9Y5V3 778 aaPredicted RBP12.41□□□□□ -0.42
ATG4D-206ENST00000586863 SVEP1Q4LDE5 3571 aa12.4□□□□□ -0.42
ATG4D-206ENST00000586863 RNF103-CHMP3A0A140T963 221 aa12.4□□□□□ -0.42
ATG4D-206ENST00000586863 DPRXA6NFQ7 191 aa12.4□□□□□ -0.42
ATG4D-206ENST00000586863 FCMRO60667 390 aa12.4□□□□□ -0.42
ATG4D-206ENST00000586863 CYTIPO60759 359 aa12.4□□□□□ -0.42
ATG4D-206ENST00000586863 DNAJA2O60884 412 aa12.4□□□□□ -0.42
ATG4D-206ENST00000586863 CYP7B1O75881 506 aa12.4□□□□□ -0.42
ATG4D-206ENST00000586863 LYZL6O75951 148 aa12.4□□□□□ -0.42
ATG4D-206ENST00000586863 BPGMP07738 259 aa12.4□□□□□ -0.42
ATG4D-206ENST00000586863 MATN1P21941 496 aa12.4□□□□□ -0.42
ATG4D-206ENST00000586863 CASP9P55211 416 aa12.4□□□□□ -0.42
ATG4D-206ENST00000586863 RASGEF1BQ0VAM2 473 aa12.4□□□□□ -0.42
ATG4D-206ENST00000586863 VEZF1Q14119 521 aa12.4□□□□□ -0.42
ATG4D-206ENST00000586863 ZNF141Q15928 474 aa12.4□□□□□ -0.42
ATG4D-206ENST00000586863 CLEC12BQ2HXU8 276 aa12.4□□□□□ -0.42
ATG4D-206ENST00000586863 PGS1Q32NB8 556 aa12.4□□□□□ -0.42
ATG4D-206ENST00000586863 ZNF672Q499Z4 452 aaPredicted RBP12.4□□□□□ -0.42
ATG4D-206ENST00000586863 OR4F3Q6IEY1 312 aa12.4□□□□□ -0.42
ATG4D-206ENST00000586863 C3orf33Q6P1S2 294 aa12.4□□□□□ -0.42
ATG4D-206ENST00000586863 Q6ZT83 130 aa12.4□□□□□ -0.42
ATG4D-206ENST00000586863 C6orf120Q7Z4R8 191 aa12.4□□□□□ -0.42
ATG4D-206ENST00000586863 LSRQ86X29 649 aaPredicted RBP12.4□□□□□ -0.42
ATG4D-206ENST00000586863 PIWIL2Q8TC59 973 aaKnown RBP12.4□□□□□ -0.42
ATG4D-206ENST00000586863 SMAP2Q8WU79 429 aaPredicted RBP12.4□□□□□ -0.42
ATG4D-206ENST00000586863 ZNF75CPQ92670 426 aaPredicted RBP12.4□□□□□ -0.42
ATG4D-206ENST00000586863 SLC35G5Q96KT7 338 aa12.4□□□□□ -0.42
ATG4D-206ENST00000586863 OR5B2Q96R09 309 aa12.4□□□□□ -0.42
ATG4D-206ENST00000586863 THUMPD3Q9BV44 507 aaKnown RBP12.4□□□□□ -0.42
ATG4D-206ENST00000586863 ZNF350Q9GZX5 532 aa12.4□□□□□ -0.42
ATG4D-206ENST00000586863 LAT2Q9GZY6 243 aa12.4□□□□□ -0.42
ATG4D-206ENST00000586863 NGBQ9NPG2 151 aa12.4□□□□□ -0.42
ATG4D-206ENST00000586863 RNF223E7ERA6 249 aa12.39□□□□□ -0.43
ATG4D-206ENST00000586863 BCAS1O75363 584 aaPredicted RBP12.39□□□□□ -0.43
ATG4D-206ENST00000586863 UGT2B17O75795 530 aa12.39□□□□□ -0.43
ATG4D-206ENST00000586863 FESP07332 822 aa12.39□□□□□ -0.43
ATG4D-206ENST00000586863 UBTFL6P0CB48 400 aaPredicted RBP12.39□□□□□ -0.43
ATG4D-206ENST00000586863 ETV4P43268 484 aa12.39□□□□□ -0.43
ATG4D-206ENST00000586863 CLDN8P56748 225 aa12.39□□□□□ -0.43
ATG4D-206ENST00000586863 SESN3P58005 492 aa12.39□□□□□ -0.43
ATG4D-206ENST00000586863 EMX2Q04743 252 aa12.39□□□□□ -0.43
ATG4D-206ENST00000586863 FAPQ12884 760 aa12.39□□□□□ -0.43
ATG4D-206ENST00000586863 STK11Q15831 433 aa12.39□□□□□ -0.43
ATG4D-206ENST00000586863 PDCD2Q16342 344 aaPredicted RBP12.39□□□□□ -0.43
ATG4D-206ENST00000586863 MAPK14Q16539 360 aa12.39□□□□□ -0.43
ATG4D-206ENST00000586863 PGGHGQ32M88 737 aa12.39□□□□□ -0.43
ATG4D-206ENST00000586863 BHLHB9Q6PI77 547 aa12.39□□□□□ -0.43
ATG4D-206ENST00000586863 ST8SIA1Q92185 356 aa12.39□□□□□ -0.43
ATG4D-206ENST00000586863 PKNOX2Q96KN3 472 aa12.39□□□□□ -0.43
ATG4D-206ENST00000586863 PPP1R36Q96LQ0 422 aa12.39□□□□□ -0.43
ATG4D-206ENST00000586863 TRIM2Q9C040 744 aa12.39□□□□□ -0.43
ATG4D-206ENST00000586863 ASIC5Q9NY37 505 aa12.39□□□□□ -0.43
ATG4D-206ENST00000586863 NOP53Q9NZM5 478 aaKnown RBP12.39□□□□□ -0.43
ATG4D-206ENST00000586863 NPAP1Q9NZP6 1156 aa12.39□□□□□ -0.43
ATG4D-206ENST00000586863 MKLN1Q9UL63 735 aa12.39□□□□□ -0.43
ATG4D-206ENST00000586863 LIPT1Q9Y234 373 aa12.39□□□□□ -0.43
ATG4D-206ENST00000586863 A0A1W2PP18 115 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms