RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 RNASET2O00584 256 aaKnown RBP9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 KLF4O43474 513 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 MGRN1O60291 552 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 KCNH1O95259 989 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 SYNGR4O95473 234 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 IL3P08700 152 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 ZCCHC18P0CG32 403 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 HOXB9P17482 250 aaPredicted RBP9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 DDCP20711 480 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 IL11P20809 199 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 LOXP28300 417 aaPredicted RBP9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 HPCAL1P37235 193 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 SUCLG1P53597 346 aaKnown RBP9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 DUSP2Q05923 314 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 C17orf67Q0P5P2 114 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 C2orf80Q0P641 193 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 ZNF155Q12901 538 aaPredicted RBP9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 TNK1Q13470 666 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 VEZF1Q14119 521 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 CLEC12BQ2HXU8 276 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 PDSS1Q5T2R2 415 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 FAM180BQ6P0A1 224 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 SLC2A7Q6PXP3 512 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 NPSR1Q6W5P4 371 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 NET1Q7Z628 596 aaPredicted RBP9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 WFDC8Q8IUA0 241 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 SLC15A3Q8IY34 581 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 VPS37AQ8NEZ2 397 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 OR7A2PQ8NGA2 310 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 OR8J3Q8NGG0 315 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 CLHC1Q8NHS4 586 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 DUSP19Q8WTR2 217 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 IGFBPL1Q8WX77 278 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 GTPBP3Q969Y2 492 aaKnown RBP9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 C1GALT1C1Q96EU7 318 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 PLPPR2Q96GM1 343 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 ITCHQ96J02 903 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 CCDC115Q96NT0 180 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 SH3GL1Q99961 368 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 HDHD5Q9BXW7 423 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 TBL1XR1Q9BZK7 514 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 SLC7A8Q9UHI5 535 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 MED12LQ86YW9 2145 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 COL6A5A8TX70 2615 aa9.62□□□□□ -0.87
CSNK1D-226ENST00000585026 DSCAMO60469 2012 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 ATRQ13535 2644 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 A0A087WV62 115 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 A0A087WZY1 265 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 RNF212BA8MTL3 300 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 H0YC42 278 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 H0YHG0 523 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 AKAP10O43572 662 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 TLX2O43763 284 aaPredicted RBP9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 FADS1O60427 444 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 DNAJA2O60884 412 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 PABPC4LP0CB38 370 aaKnown RBP9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 LAMP1P11279 417 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 HSD17B1P14061 328 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 FRKP42685 505 aaPredicted RBP9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 EIF1AXP47813 144 aaKnown RBP9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 TPD52P55327 224 aaPredicted RBP9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 CLDN20P56880 219 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 NFYCQ13952 458 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 CEACAM7Q14002 265 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 MLC1Q15049 377 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 GUSBP1Q15486 140 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 FXNQ16595 210 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 PGS1Q32NB8 556 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 RUNDC3AQ59EK9 446 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 SAMD4BQ5PRF9 694 aaKnown RBP9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 NANOGP8Q6NSW7 305 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 HMBOX1Q6NT76 420 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 STAC2Q6ZMT1 411 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 STEAP2Q8NFT2 490 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 NANOS1Q8WY41 292 aaKnown RBP9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 TMEM158Q8WZ71 300 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 ANKRD27Q96NW4 1050 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 CGREF1Q99674 301 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 USB1Q9BQ65 265 aaKnown RBP9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 DUSP26Q9BV47 211 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 ACTR6Q9GZN1 396 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 PAIP1Q9H074 479 aaKnown RBP9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 RASSF4Q9H2L5 321 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 ANKRA2Q9H9E1 313 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 NANOGQ9H9S0 305 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 SLAMF8Q9P0V8 285 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 LAMP3Q9UQV4 416 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 ROS1P08922 2347 aa9.61□□□□□ -0.87
CSNK1D-226ENST00000585026 USF3Q68DE3 2245 aa9.6□□□□□ -0.87
CSNK1D-226ENST00000585026 EIF1AYO14602 144 aaKnown RBP9.6□□□□□ -0.87
CSNK1D-226ENST00000585026 SS18L1O75177 396 aaPredicted RBP9.6□□□□□ -0.87
CSNK1D-226ENST00000585026 AQP8O94778 261 aa9.6□□□□□ -0.87
CSNK1D-226ENST00000585026 IL33O95760 270 aa9.6□□□□□ -0.87
CSNK1D-226ENST00000585026 THBDP07204 575 aa9.6□□□□□ -0.87
CSNK1D-226ENST00000585026 ZNF17P17021 662 aa9.6□□□□□ -0.87
CSNK1D-226ENST00000585026 ME2P23368 584 aa9.6□□□□□ -0.87
CSNK1D-226ENST00000585026 NTSP30990 170 aa9.6□□□□□ -0.87
CSNK1D-226ENST00000585026 ACTR3P61158 418 aa9.6□□□□□ -0.87
CSNK1D-226ENST00000585026 PSG6Q00889 435 aa9.6□□□□□ -0.87
CSNK1D-226ENST00000585026 TRAP1Q12931 704 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms