RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 CXXC4Q9H2H0 198 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 SLC38A1Q9H2H9 487 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 RMND5AQ9H871 391 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 ACER3Q9NUN7 267 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 ST6GALNAC2Q9UJ37 374 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 PRDM4Q9UKN5 801 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 PRRC2AP48634 2157 aaKnown RBP11.76□□□□□ -0.53
ERBB2-220ENST00000584684 DSPPQ9NZW4 1301 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 FAM234BA2RU67 622 aa11.75□□□□□ -0.53
ERBB2-220ENST00000584684 C16orf97H3BN30 126 aa11.75□□□□□ -0.53
ERBB2-220ENST00000584684 C1QCP02747 245 aa11.75□□□□□ -0.53
ERBB2-220ENST00000584684 OPN1LWP04000 364 aa11.75□□□□□ -0.53
ERBB2-220ENST00000584684 CHRM4P08173 479 aa11.75□□□□□ -0.53
ERBB2-220ENST00000584684 H2AFXP16104 143 aaPredicted RBP11.75□□□□□ -0.53
ERBB2-220ENST00000584684 SLC7A1P30825 629 aa11.75□□□□□ -0.53
ERBB2-220ENST00000584684 POLR2JP52435 117 aaKnown RBP11.75□□□□□ -0.53
ERBB2-220ENST00000584684 SESN3P58005 492 aa11.75□□□□□ -0.53
ERBB2-220ENST00000584684 RAC3P60763 192 aa11.75□□□□□ -0.53
ERBB2-220ENST00000584684 IRX1P78414 480 aaPredicted RBP11.75□□□□□ -0.53
ERBB2-220ENST00000584684 CHRNEQ04844 493 aa11.75□□□□□ -0.53
ERBB2-220ENST00000584684 FAM27E3Q08E93 113 aa11.75□□□□□ -0.53
ERBB2-220ENST00000584684 TIGD2Q4W5G0 525 aa11.75□□□□□ -0.53
ERBB2-220ENST00000584684 GPAT3Q53EU6 434 aa11.75□□□□□ -0.53
ERBB2-220ENST00000584684 PAMR1Q6UXH9 720 aa11.75□□□□□ -0.53
ERBB2-220ENST00000584684 ZNF621Q6ZSS3 439 aa11.75□□□□□ -0.53
ERBB2-220ENST00000584684 HDXQ7Z353 690 aa11.75□□□□□ -0.53
ERBB2-220ENST00000584684 SLC43A2Q8N370 569 aa11.75□□□□□ -0.53
ERBB2-220ENST00000584684 ANKFN1Q8N957 763 aa11.75□□□□□ -0.53
ERBB2-220ENST00000584684 ZNF610Q8N9Z0 462 aa11.75□□□□□ -0.53
ERBB2-220ENST00000584684 RFWD2Q8NHY2 731 aa11.75□□□□□ -0.53
ERBB2-220ENST00000584684 NRGNQ92686 78 aa11.75□□□□□ -0.53
ERBB2-220ENST00000584684 MBD6Q96DN6 1003 aa11.75□□□□□ -0.53
ERBB2-220ENST00000584684 REXO5Q96IC2 774 aaKnown RBP11.75□□□□□ -0.53
ERBB2-220ENST00000584684 ITCHQ96J02 903 aa11.75□□□□□ -0.53
ERBB2-220ENST00000584684 FOXC2Q99958 501 aa11.75□□□□□ -0.53
ERBB2-220ENST00000584684 TCF7L2Q9NQB0 619 aa11.75□□□□□ -0.53
ERBB2-220ENST00000584684 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.75□□□□□ -0.53
ERBB2-220ENST00000584684 SLC6A13Q9NSD5 602 aa11.75□□□□□ -0.53
ERBB2-220ENST00000584684 ARGLU1Q9NWB6 273 aaPredicted RBP11.75□□□□□ -0.53
ERBB2-220ENST00000584684 TMEM45AQ9NWC5 275 aa11.75□□□□□ -0.53
ERBB2-220ENST00000584684 THUMPD1Q9NXG2 353 aaKnown RBP11.75□□□□□ -0.53
ERBB2-220ENST00000584684 KLHL13Q9P2N7 655 aa11.75□□□□□ -0.53
ERBB2-220ENST00000584684 FLNAP21333 2647 aaKnown RBP11.74□□□□□ -0.53
ERBB2-220ENST00000584684 FAAHO00519 579 aa11.74□□□□□ -0.53
ERBB2-220ENST00000584684 POLR3GO15318 223 aaPredicted RBP11.74□□□□□ -0.53
ERBB2-220ENST00000584684 BCAS1O75363 584 aaPredicted RBP11.74□□□□□ -0.53
ERBB2-220ENST00000584684 GSNP06396 782 aa11.74□□□□□ -0.53
ERBB2-220ENST00000584684 PPP3CBP16298 524 aa11.74□□□□□ -0.53
ERBB2-220ENST00000584684 HOXB9P17482 250 aaPredicted RBP11.74□□□□□ -0.53
ERBB2-220ENST00000584684 CRYGSP22914 178 aa11.74□□□□□ -0.53
ERBB2-220ENST00000584684 FKBP2P26885 142 aaKnown RBP11.74□□□□□ -0.53
ERBB2-220ENST00000584684 APOBEC1P41238 236 aaKnown RBP11.74□□□□□ -0.53
ERBB2-220ENST00000584684 IST1P53990 364 aa11.74□□□□□ -0.53
ERBB2-220ENST00000584684 KCNJ10P78508 379 aa11.74□□□□□ -0.53
ERBB2-220ENST00000584684 SYPL1Q16563 259 aa11.74□□□□□ -0.53
ERBB2-220ENST00000584684 TMEM176BQ3YBM2 270 aaPredicted RBP11.74□□□□□ -0.53
ERBB2-220ENST00000584684 COX20Q5RI15 118 aa11.74□□□□□ -0.53
ERBB2-220ENST00000584684 PPP4R4Q6NUP7 873 aa11.74□□□□□ -0.53
ERBB2-220ENST00000584684 DNAJC14Q6Y2X3 702 aaPredicted RBP11.74□□□□□ -0.53
ERBB2-220ENST00000584684 PLEKHM3Q6ZWE6 761 aa11.74□□□□□ -0.53
ERBB2-220ENST00000584684 FCRLAQ7L513 359 aa11.74□□□□□ -0.53
ERBB2-220ENST00000584684 STK32CQ86UX6 486 aa11.74□□□□□ -0.53
ERBB2-220ENST00000584684 OR9I1Q8NGQ6 314 aa11.74□□□□□ -0.53
ERBB2-220ENST00000584684 ABHD3Q8WU67 409 aa11.74□□□□□ -0.53
ERBB2-220ENST00000584684 ZG16BQ96DA0 208 aa11.74□□□□□ -0.53
ERBB2-220ENST00000584684 CCDC28BQ9BUN5 200 aa11.74□□□□□ -0.53
ERBB2-220ENST00000584684 CCDC106Q9BWC9 280 aa11.74□□□□□ -0.53
ERBB2-220ENST00000584684 OR10A4Q9H209 315 aa11.74□□□□□ -0.53
ERBB2-220ENST00000584684 PLEKHF2Q9H8W4 249 aa11.74□□□□□ -0.53
ERBB2-220ENST00000584684 MTHFD2LQ9H903 347 aaPredicted RBP11.74□□□□□ -0.53
ERBB2-220ENST00000584684 SLCO1B3Q9NPD5 702 aa11.74□□□□□ -0.53
ERBB2-220ENST00000584684 FANCFQ9NPI8 374 aa11.74□□□□□ -0.53
ERBB2-220ENST00000584684 ZNF226Q9NYT6 803 aa11.74□□□□□ -0.53
ERBB2-220ENST00000584684 CALML5Q9NZT1 146 aa11.74□□□□□ -0.53
ERBB2-220ENST00000584684 P2RX2Q9UBL9 471 aa11.74□□□□□ -0.53
ERBB2-220ENST00000584684 ITGB1BP2Q9UKP3 347 aa11.74□□□□□ -0.53
ERBB2-220ENST00000584684 SPIN1Q9Y657 262 aaPredicted RBP11.74□□□□□ -0.53
ERBB2-220ENST00000584684 CASKO14936 926 aa11.73□□□□□ -0.53
ERBB2-220ENST00000584684 CYP7B1O75881 506 aa11.73□□□□□ -0.53
ERBB2-220ENST00000584684 DBIP07108 87 aaKnown RBP11.73□□□□□ -0.53
ERBB2-220ENST00000584684 KCNJ5P48544 419 aa11.73□□□□□ -0.53
ERBB2-220ENST00000584684 IDH3AP50213 366 aa11.73□□□□□ -0.53
ERBB2-220ENST00000584684 ART1P52961 327 aa11.73□□□□□ -0.53
ERBB2-220ENST00000584684 STX1BP61266 288 aa11.73□□□□□ -0.53
ERBB2-220ENST00000584684 MERTKQ12866 999 aa11.73□□□□□ -0.53
ERBB2-220ENST00000584684 GNA13Q14344 377 aa11.73□□□□□ -0.53
ERBB2-220ENST00000584684 MAPK11Q15759 364 aa11.73□□□□□ -0.53
ERBB2-220ENST00000584684 SYT14P1Q58G82 188 aa11.73□□□□□ -0.53
ERBB2-220ENST00000584684 FBXW10Q5XX13 1052 aa11.73□□□□□ -0.53
ERBB2-220ENST00000584684 BEND4Q6ZU67 534 aa11.73□□□□□ -0.53
ERBB2-220ENST00000584684 GRINAQ7Z429 371 aa11.73□□□□□ -0.53
ERBB2-220ENST00000584684 ARFGAP2Q8N6H7 521 aa11.73□□□□□ -0.53
ERBB2-220ENST00000584684 GOLGA6L1Q8N7Z2 621 aa11.73□□□□□ -0.53
ERBB2-220ENST00000584684 PNPT1Q8TCS8 783 aaKnown RBP11.73□□□□□ -0.53
ERBB2-220ENST00000584684 ROBO4Q8WZ75 1007 aa11.73□□□□□ -0.53
ERBB2-220ENST00000584684 GTF2H4Q92759 462 aa11.73□□□□□ -0.53
ERBB2-220ENST00000584684 VPS33AQ96AX1 596 aa11.73□□□□□ -0.53
ERBB2-220ENST00000584684 WFIKKN1Q96NZ8 548 aa11.73□□□□□ -0.53
ERBB2-220ENST00000584684 ALPK1Q96QP1 1244 aa11.73□□□□□ -0.53
ERBB2-220ENST00000584684 MED18Q9BUE0 208 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms