RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	RNF130	Q86XS8	419 aa		11.26	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	MIER2	Q8N344	545 aa		11.26	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ZNF610	Q8N9Z0	462 aa		11.26	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	RAB8B	Q92930	207 aa		11.26	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ZBTB9	Q96C00	473 aa		11.26	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ITCH	Q96J02	903 aa		11.26	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	THUMPD3	Q9BV44	507 aa	Known RBP	11.26	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	OPN3	Q9H1Y3	402 aa	Predicted RBP	11.26	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CXXC4	Q9H2H0	198 aa		11.26	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CALML5	Q9NZT1	146 aa		11.26	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	AKAP6	Q13023	2319 aa		11.26	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	HEATR5A	Q86XA9	2040 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	FAM234B	A2RU67	622 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	FAAH	O00519	579 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	DNPH1	O43598	174 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	DIAPH2	O60879	1101 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	PRKD3	O94806	890 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	H6PD	O95479	791 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	HRG	P04196	525 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	UBTFL6	P0CB48	400 aa	Predicted RBP	11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	UQCRB	P14927	111 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	DNASE1	P24855	282 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	SFTPD	P35247	375 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	HTR3A	P46098	478 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	KCNJ5	P48544	419 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CCR4	P51679	360 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	POLR2J	P52435	117 aa	Known RBP	11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	SESN3	P58005	492 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	STX1B	P61266	288 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CSNK2A1	P68400	391 aa	Predicted RBP	11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	TOMM34	Q15785	309 aa	Predicted RBP	11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	MAPK14	Q16539	360 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	TMEM176B	Q3YBM2	270 aa	Predicted RBP	11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	TIGD2	Q4W5G0	525 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	TMEM201	Q5SNT2	666 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ZNF440	Q8IYI8	595 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ARFGAP2	Q8N6H7	521 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	RFWD2	Q8NHY2	731 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	OR52B2	Q96RD2	323 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	KLHDC3	Q9BQ90	382 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	INPP5K	Q9BT40	448 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	MED18	Q9BUE0	208 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CCDC28B	Q9BUN5	200 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	HDHD5	Q9BXW7	423 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	SLC38A1	Q9H2H9	487 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	RAD21L1	Q9H4I0	556 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	TMEM185B	Q9H7F4	350 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	TCF7L2	Q9NQB0	619 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	KLHL9	Q9P2J3	617 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	KLHL13	Q9P2N7	655 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	P2RX2	Q9UBL9	471 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ITGB1BP2	Q9UKP3	347 aa		11.25	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	POLR3G	O15318	223 aa	Predicted RBP	11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CYP7B1	O75881	506 aa		11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ANP32D	O95626	131 aa		11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	RAF1	P04049	648 aa		11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	DBI	P07108	87 aa	Known RBP	11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	YES1	P07947	543 aa		11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	NR2F1	P10589	423 aa		11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	PSMB1	P20618	241 aa	Known RBP	11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	RPS4Y1	P22090	263 aa	Known RBP	11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CRYGS	P22914	178 aa		11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	AGTR1	P30556	359 aa		11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CDKN2C	P42773	168 aa		11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ART1	P52961	327 aa		11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	IST1	P53990	364 aa		11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CHRNE	Q04844	493 aa		11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	MERTK	Q12866	999 aa		11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	NDUFAF6	Q330K2	333 aa		11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	PRAMEF8	Q5VWM4	474 aa		11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	PRAMEF7	Q5VXH5	474 aa		11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	PPP4R4	Q6NUP7	873 aa		11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	PAMR1	Q6UXH9	720 aa		11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	PLEKHM3	Q6ZWE6	761 aa		11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	FCRLA	Q7L513	359 aa		11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	GRINA	Q7Z429	371 aa		11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	PEX5L	Q8IYB4	626 aa		11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	DYDC1	Q8WWB3	177 aa		11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ALPK1	Q96QP1	1244 aa		11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	COQ10B	Q9H8M1	238 aa		11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	PLEKHF2	Q9H8W4	249 aa		11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	BCO1	Q9HAY6	547 aa		11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	GPR52	Q9Y2T5	361 aa		11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	AKAP9	Q99996	3911 aa		11.24	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CENPVL1	A0A0U1RR11	272 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	PRAMEF27	A3QJZ7	478 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	TMEM247	A6NEH6	219 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CNOT4	O95628	575 aa	Known RBP	11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	OPN1LW	P04000	364 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	IL7R	P16871	459 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ENPP1	P22413	925 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	SHC1	P29353	583 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	MVD	P53602	400 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CRISP3	P54108	245 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CASP9	P55211	416 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	FADD	Q13158	208 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	P2RY6	Q15077	328 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	PDK3	Q15120	406 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	SYPL1	Q16563	259 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	SYT14P1	Q58G82	188 aa		11.23	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms