RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 TMEM234Q8WY98 164 aa17.45■□□□□ 0.38
SREBF1-220ENST00000581707 ROBO4Q8WZ75 1007 aa17.45■□□□□ 0.38
SREBF1-220ENST00000581707 NRGNQ92686 78 aa17.45■□□□□ 0.38
SREBF1-220ENST00000581707 VPS33AQ96AX1 596 aa17.45■□□□□ 0.38
SREBF1-220ENST00000581707 REXO5Q96IC2 774 aaKnown RBP17.45■□□□□ 0.38
SREBF1-220ENST00000581707 QRSL1Q9H0R6 528 aaKnown RBP17.45■□□□□ 0.38
SREBF1-220ENST00000581707 SLC38A1Q9H2H9 487 aa17.45■□□□□ 0.38
SREBF1-220ENST00000581707 MTHFD2LQ9H903 347 aaPredicted RBP17.45■□□□□ 0.38
SREBF1-220ENST00000581707 ACER3Q9NUN7 267 aa17.45■□□□□ 0.38
SREBF1-220ENST00000581707 ELOVL5Q9NYP7 299 aa17.45■□□□□ 0.38
SREBF1-220ENST00000581707 SS18L1O75177 396 aaPredicted RBP17.44■□□□□ 0.38
SREBF1-220ENST00000581707 BCAS1O75363 584 aaPredicted RBP17.44■□□□□ 0.38
SREBF1-220ENST00000581707 PABPC4LP0CB38 370 aaKnown RBP17.44■□□□□ 0.38
SREBF1-220ENST00000581707 POU2F1P14859 743 aa17.44■□□□□ 0.38
SREBF1-220ENST00000581707 KCNJ5P48544 419 aa17.44■□□□□ 0.38
SREBF1-220ENST00000581707 AQP5P55064 265 aa17.44■□□□□ 0.38
SREBF1-220ENST00000581707 FBXW10Q5XX13 1052 aa17.44■□□□□ 0.38
SREBF1-220ENST00000581707 OR6K3Q8NGY3 331 aa17.44■□□□□ 0.38
SREBF1-220ENST00000581707 CPNE4Q96A23 557 aaPredicted RBP17.44■□□□□ 0.38
SREBF1-220ENST00000581707 EBF4Q9BQW3 602 aa17.44■□□□□ 0.38
SREBF1-220ENST00000581707 CCDC28BQ9BUN5 200 aa17.44■□□□□ 0.38
SREBF1-220ENST00000581707 SRXN1Q9BYN0 137 aa17.44■□□□□ 0.38
SREBF1-220ENST00000581707 PLSCR4Q9NRQ2 329 aa17.44■□□□□ 0.38
SREBF1-220ENST00000581707 AGAP5A6NIR3 686 aa17.43■□□□□ 0.38
SREBF1-220ENST00000581707 CLDN24A6NM45 220 aa17.43■□□□□ 0.38
SREBF1-220ENST00000581707 CASKO14936 926 aa17.43■□□□□ 0.38
SREBF1-220ENST00000581707 SLC7A1P30825 629 aa17.43■□□□□ 0.38
SREBF1-220ENST00000581707 DNAJA1P31689 397 aaKnown RBP17.43■□□□□ 0.38
SREBF1-220ENST00000581707 RYKP34925 604 aa17.43■□□□□ 0.38
SREBF1-220ENST00000581707 CRATP43155 626 aa17.43■□□□□ 0.38
SREBF1-220ENST00000581707 MRPL19P49406 292 aaKnown RBP17.43■□□□□ 0.38
SREBF1-220ENST00000581707 MERTKQ12866 999 aa17.43■□□□□ 0.38
SREBF1-220ENST00000581707 ZNF239Q16600 458 aaKnown RBP17.43■□□□□ 0.38
SREBF1-220ENST00000581707 C6orf10Q5SRN2 563 aa17.43■□□□□ 0.38
SREBF1-220ENST00000581707 CDC20BQ86Y33 519 aa17.43■□□□□ 0.38
SREBF1-220ENST00000581707 ARFGAP2Q8N6H7 521 aa17.43■□□□□ 0.38
SREBF1-220ENST00000581707 ZNF563Q8TA94 476 aa17.43■□□□□ 0.38
SREBF1-220ENST00000581707 TPT1P8Q9HAU6 139 aa17.43■□□□□ 0.38
SREBF1-220ENST00000581707 SERINC1Q9NRX5 453 aa17.43■□□□□ 0.38
SREBF1-220ENST00000581707 GOSR1O95249 250 aa17.42■□□□□ 0.38
SREBF1-220ENST00000581707 ETFAP13804 333 aa17.42■□□□□ 0.38
SREBF1-220ENST00000581707 NID1P14543 1247 aa17.42■□□□□ 0.38
SREBF1-220ENST00000581707 UGT2B10P36537 528 aa17.42■□□□□ 0.38
SREBF1-220ENST00000581707 MVDP53602 400 aa17.42■□□□□ 0.38
SREBF1-220ENST00000581707 RNPS1Q15287 305 aaKnown RBP17.42■□□□□ 0.38
SREBF1-220ENST00000581707 EXOC3L2Q2M3D2 409 aa17.42■□□□□ 0.38
SREBF1-220ENST00000581707 GTDC1Q4AE62 458 aa17.42■□□□□ 0.38
SREBF1-220ENST00000581707 C3orf33Q6P1S2 294 aa17.42■□□□□ 0.38
SREBF1-220ENST00000581707 PLEKHM3Q6ZWE6 761 aa17.42■□□□□ 0.38
SREBF1-220ENST00000581707 CMIPQ8IY22 773 aa17.42■□□□□ 0.38
SREBF1-220ENST00000581707 RNF128Q8TEB7 428 aa17.42■□□□□ 0.38
SREBF1-220ENST00000581707 CKAP2Q8WWK9 683 aa17.42■□□□□ 0.38
SREBF1-220ENST00000581707 GTF2H4Q92759 462 aa17.42■□□□□ 0.38
SREBF1-220ENST00000581707 PMM1Q92871 262 aa17.42■□□□□ 0.38
SREBF1-220ENST00000581707 MAGEB18Q96M61 343 aa17.42■□□□□ 0.38
SREBF1-220ENST00000581707 WFIKKN1Q96NZ8 548 aa17.42■□□□□ 0.38
SREBF1-220ENST00000581707 COQ10BQ9H8M1 238 aa17.42■□□□□ 0.38
SREBF1-220ENST00000581707 EXOSC3Q9NQT5 275 aaKnown RBP17.42■□□□□ 0.38
SREBF1-220ENST00000581707 P2RX2Q9UBL9 471 aa17.42■□□□□ 0.38
SREBF1-220ENST00000581707 TESMINQ9Y4I5 508 aa17.42■□□□□ 0.38
SREBF1-220ENST00000581707 CELSR1Q9NYQ6 3014 aa17.42■□□□□ 0.38
SREBF1-220ENST00000581707 A0A1W2PNR3 127 aa17.41■□□□□ 0.38
SREBF1-220ENST00000581707 C16orf97H3BN30 126 aa17.41■□□□□ 0.38
SREBF1-220ENST00000581707 IL7RP16871 459 aa17.41■□□□□ 0.38
SREBF1-220ENST00000581707 AGTR1P30556 359 aa17.41■□□□□ 0.38
SREBF1-220ENST00000581707 APOBEC1P41238 236 aaKnown RBP17.41■□□□□ 0.38
SREBF1-220ENST00000581707 RAC3P60763 192 aa17.41■□□□□ 0.38
SREBF1-220ENST00000581707 PLAURQ03405 335 aa17.41■□□□□ 0.38
SREBF1-220ENST00000581707 GNA13Q14344 377 aa17.41■□□□□ 0.38
SREBF1-220ENST00000581707 SLC2A7Q6PXP3 512 aa17.41■□□□□ 0.38
SREBF1-220ENST00000581707 FCRLAQ7L513 359 aa17.41■□□□□ 0.38
SREBF1-220ENST00000581707 PEX5LQ8IYB4 626 aa17.41■□□□□ 0.38
SREBF1-220ENST00000581707 ABHD3Q8WU67 409 aa17.41■□□□□ 0.38
SREBF1-220ENST00000581707 WDR60Q8WVS4 1066 aa17.41■□□□□ 0.38
SREBF1-220ENST00000581707 CNOT9Q92600 299 aaKnown RBP17.41■□□□□ 0.38
SREBF1-220ENST00000581707 AURKBQ96GD4 344 aaPredicted RBP17.41■□□□□ 0.38
SREBF1-220ENST00000581707 OR5B2Q96R09 309 aa17.41■□□□□ 0.38
SREBF1-220ENST00000581707 PAIP1Q9H074 479 aaKnown RBP17.41■□□□□ 0.38
SREBF1-220ENST00000581707 CALML5Q9NZT1 146 aa17.41■□□□□ 0.38
SREBF1-220ENST00000581707 PCDHB14Q9Y5E9 798 aa17.41■□□□□ 0.38
SREBF1-220ENST00000581707 AKAP9Q99996 3911 aa17.41■□□□□ 0.38
SREBF1-220ENST00000581707 TEP1Q99973 2627 aaKnown RBP17.4■□□□□ 0.38
SREBF1-220ENST00000581707 SASH3O75995 380 aa17.4■□□□□ 0.38
SREBF1-220ENST00000581707 PRKD3O94806 890 aa17.4■□□□□ 0.38
SREBF1-220ENST00000581707 DBIP07108 87 aaKnown RBP17.4■□□□□ 0.38
SREBF1-220ENST00000581707 RPS4Y1P22090 263 aaKnown RBP17.4■□□□□ 0.38
SREBF1-220ENST00000581707 DSTNP60981 165 aa17.4■□□□□ 0.38
SREBF1-220ENST00000581707 MAPK11Q15759 364 aa17.4■□□□□ 0.38
SREBF1-220ENST00000581707 BLOC1S3Q6QNY0 202 aa17.4■□□□□ 0.38
SREBF1-220ENST00000581707 FUNDC1Q8IVP5 155 aa17.4■□□□□ 0.38
SREBF1-220ENST00000581707 SLC43A2Q8N370 569 aa17.4■□□□□ 0.38
SREBF1-220ENST00000581707 SLC25A43Q8WUT9 341 aaPredicted RBP17.4■□□□□ 0.38
SREBF1-220ENST00000581707 MED18Q9BUE0 208 aa17.4■□□□□ 0.38
SREBF1-220ENST00000581707 CCDC106Q9BWC9 280 aa17.4■□□□□ 0.38
SREBF1-220ENST00000581707 KLHL4Q9C0H6 718 aa17.4■□□□□ 0.38
SREBF1-220ENST00000581707 LIME1Q9H400 295 aa17.4■□□□□ 0.38
SREBF1-220ENST00000581707 CTPS2Q9NRF8 586 aa17.4■□□□□ 0.38
SREBF1-220ENST00000581707 THUMPD1Q9NXG2 353 aaKnown RBP17.4■□□□□ 0.38
SREBF1-220ENST00000581707 KLHL28Q9NXS3 571 aa17.4■□□□□ 0.38
SREBF1-220ENST00000581707 EDARQ9UNE0 448 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms