RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 RUNX1T1Q06455 604 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 RASGEF1BQ0VAM2 473 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 CBFBQ13951 182 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 QPRTQ15274 297 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 ZNF141Q15928 474 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 NDUFAF6Q330K2 333 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 SPDYE7PQ495Y7 208 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 TIGD2Q4W5G0 525 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 ATP6AP1LQ52LC2 224 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 TIMM23BQ5SRD1 257 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 IL23RQ5VWK5 629 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 AP1ARQ63HQ0 302 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 BHLHB9Q6PI77 547 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 DTX2Q86UW9 622 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 GSPT2Q8IYD1 628 aaKnown RBP9.38□□□□□ -0.91
RFFL-209ENST00000581265 ZNF619Q8N2I2 560 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 KRTCAP2Q8N6L1 136 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 MAPK1IP1LQ8NDC0 245 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 EPS8L3Q8TE67 593 aaKnown RBP9.38□□□□□ -0.91
RFFL-209ENST00000581265 ST8SIA1Q92185 356 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 MUCL1Q96DR8 90 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 RADILQ96JH8 1075 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 C3orf30Q96M34 536 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 OR7D2Q96RA2 312 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 TRAF4Q9BUZ4 470 aaPredicted RBP9.38□□□□□ -0.91
RFFL-209ENST00000581265 BHLHE41Q9C0J9 482 aaPredicted RBP9.38□□□□□ -0.91
RFFL-209ENST00000581265 LAT2Q9GZY6 243 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 YAE1D1Q9NRH1 226 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 CISD1Q9NZ45 108 aaKnown RBP9.38□□□□□ -0.91
RFFL-209ENST00000581265 GIMAP2Q9UG22 337 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 PRSS50Q9UI38 385 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 KCNE5Q9UJ90 142 aa9.38□□□□□ -0.91
RFFL-209ENST00000581265 MXRA5Q9NR99 2828 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 IGHV3-15A0A0B4J1V0 119 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 GOLGA8QA0A0J9YX86 632 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 GOLGA8OA6NCC3 632 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 SHISA9B4DS77 424 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 C9JVG2 144 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 GOLGA8NF8WBI6 632 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 SMAD9O15198 467 aaKnown RBP9.37□□□□□ -0.91
RFFL-209ENST00000581265 FCMRO60667 390 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 RAMP1O60894 148 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 NDUFS7O75251 213 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 LYZL6O75951 148 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 H6PDO95479 791 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 IGHV4-39P01824 125 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 UBL4AP11441 157 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 COX5AP20674 150 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 EDNRAP25101 427 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 SERPINB5P36952 375 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 SESN3P58005 492 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 C21orf58P58505 322 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 HBA1P69905 142 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 FAPQ12884 760 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 SKP2Q13309 424 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 PDK3Q15120 406 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 PPA1Q15181 289 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 CHRFAM7AQ494W8 412 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 PDZK1Q5T2W1 519 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 C3orf33Q6P1S2 294 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 TMPPEQ6ZT21 453 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 GALNT5Q7Z7M9 940 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 HIPK1Q86Z02 1210 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 ZNF614Q8N883 585 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 KBTBD8Q8NFY9 601 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 RFWD2Q8NHY2 731 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 ZNF775Q96BV0 537 aaPredicted RBP9.37□□□□□ -0.91
RFFL-209ENST00000581265 APOPT1Q96IL0 206 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 OR5B2Q96R09 309 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 THUMPD3Q9BV44 507 aaKnown RBP9.37□□□□□ -0.91
RFFL-209ENST00000581265 DUSP26Q9BV47 211 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 BARX1Q9HBU1 254 aaPredicted RBP9.37□□□□□ -0.91
RFFL-209ENST00000581265 SERINC1Q9NRX5 453 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 FAIMQ9NVQ4 179 aa9.37□□□□□ -0.91
RFFL-209ENST00000581265 IGKV3D-15A0A087WSY6 115 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 OR5H1A6NKK0 313 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 SULT2B1O00204 365 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 CFLARO15519 480 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 CD5LO43866 347 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 ADAM11O75078 769 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 STX11O75558 287 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 UGT2B17O75795 530 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 AK1P00568 194 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 GUSBP08236 651 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 GGT1P19440 569 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 MATN1P21941 496 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 IGHV1-2P23083 117 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 ARRB2P32121 409 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 DIO1P49895 249 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 CLDN8P56748 225 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 CSNK2A1P68400 391 aaPredicted RBP9.36□□□□□ -0.91
RFFL-209ENST00000581265 GPR68Q15743 365 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 ARHGAP11BQ3KRB8 267 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 C6orf120Q7Z4R8 191 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 MTDHQ86UE4 582 aaKnown RBP9.36□□□□□ -0.91
RFFL-209ENST00000581265 ZNF100Q8IYN0 542 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 ZNF433Q8N7K0 673 aaPredicted RBP9.36□□□□□ -0.91
RFFL-209ENST00000581265 FNDC5Q8NAU1 212 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 OR5D16Q8NGK9 328 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 OR5AK3PQ8NH89 298 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms