RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 NPIPA5E9PKD4 350 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 J3KTA2 159 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 DLGAP1O14490 977 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 SLC16A6O15403 523 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 OR10H3O60404 316 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 NME6O75414 186 aaPredicted RBP9.3□□□□□ -0.92
SS18-207ENST00000577636 KCNK2O95069 426 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 ADAP00813 363 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 PIGAP37287 484 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 MAP3K8P41279 467 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 PPICP45877 212 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 DAPP51397 102 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 TOP3AQ13472 1001 aaPredicted RBP9.3□□□□□ -0.92
SS18-207ENST00000577636 DGCR6Q14129 220 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 TRAM2Q15035 370 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 ZNF766Q5HY98 468 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 RNF220Q5VTB9 566 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 FCRLBQ6BAA4 426 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 SPNS3Q6ZMD2 512 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 C3P1Q6ZMU1 363 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 MEX3BQ6ZN04 569 aaKnown RBP9.3□□□□□ -0.92
SS18-207ENST00000577636 ZNF836Q6ZNA1 936 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 OLIG3Q7RTU3 272 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 HMGN2P46Q86SG4 172 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 SLC5A8Q8N695 610 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 ZNF614Q8N883 585 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 SIMC1Q8NDZ2 872 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 PLPP5Q8NEB5 264 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 OR4C15Q8NGM1 316 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 C16orf52Q8NHV5 167 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 SLC2A12Q8TD20 617 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 PTPMT1Q8WUK0 201 aaPredicted RBP9.3□□□□□ -0.92
SS18-207ENST00000577636 HOXB13Q92826 284 aaPredicted RBP9.3□□□□□ -0.92
SS18-207ENST00000577636 TSLPQ969D9 159 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 POM121Q96HA1 1249 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 MUS81Q96NY9 551 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 FEVQ99581 238 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 MRPS26Q9BYN8 205 aaKnown RBP9.3□□□□□ -0.92
SS18-207ENST00000577636 VN1R1Q9GZP7 353 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.3□□□□□ -0.92
SS18-207ENST00000577636 ANKRD10Q9NXR5 420 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 SELENONQ9NZV5 590 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 RHCGQ9UBD6 479 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 TMEFF2Q9UIK5 374 aaPredicted RBP9.3□□□□□ -0.92
SS18-207ENST00000577636 CBLCQ9ULV8 474 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 NPIPA1Q9UND3 350 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 HSPE1-MOB4S4R3N1 261 aa9.3□□□□□ -0.92
SS18-207ENST00000577636 IGLV3-12A0A075B6K2 115 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 IGHV3-20A0A0C4DH32 117 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 C2orf92A0A1B0GVN3 265 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 GXYLT2A0PJZ3 443 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 OR2W5A6NFC9 320 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 PRAMEF25A6NGN4 478 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 H3BNH8 94 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 OR5F1O95221 314 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 CLPTM1O96005 669 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 CYP4B1P13584 511 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 ICAM2P13598 275 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 AGAP20933 346 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 GSTM3P21266 225 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 DRD5P21918 477 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 LCN1P31025 176 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 SOX18P35713 384 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 SLC37A1P57057 533 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 NUP107P57740 925 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 ESRRGP62508 458 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 EEF1A1P68104 462 aaKnown RBP9.29□□□□□ -0.92
SS18-207ENST00000577636 PSG6Q00889 435 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 IL5RAQ01344 420 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 ALDH6A1Q02252 535 aaKnown RBP9.29□□□□□ -0.92
SS18-207ENST00000577636 FOXD4Q12950 439 aaPredicted RBP9.29□□□□□ -0.92
SS18-207ENST00000577636 NPRL3Q12980 569 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 PIN1Q13526 163 aaPredicted RBP9.29□□□□□ -0.92
SS18-207ENST00000577636 KCTD21Q4G0X4 260 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 RBM48Q5RL73 367 aaKnown RBP9.29□□□□□ -0.92
SS18-207ENST00000577636 USP51Q70EK9 711 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 ZNF550Q7Z398 422 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 TSEN54Q7Z6J9 526 aaKnown RBP9.29□□□□□ -0.92
SS18-207ENST00000577636 RBM45Q8IUH3 476 aaKnown RBP9.29□□□□□ -0.92
SS18-207ENST00000577636 CMIPQ8IY22 773 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 DEPDC4Q8N2C3 294 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 ZNF615Q8N8J6 731 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 AQP11Q8NBQ7 271 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 TSPAN14Q8NG11 270 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 OR6T1Q8NGN1 323 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 C14orf79Q96F83 325 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 LCORQ96JN0 433 aaPredicted RBP9.29□□□□□ -0.92
SS18-207ENST00000577636 GAL3ST4Q96RP7 486 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 MBOAT4Q96T53 435 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 MCHR1Q99705 422 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 ZNF559Q9BR84 538 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 ITPAQ9BY32 194 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 HES7Q9BYE0 225 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 UCK2Q9BZX2 261 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 TMEM27Q9HBJ8 222 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 MCCC2Q9HCC0 563 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 VCX3AQ9NNX9 186 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 TESQ9UGI8 421 aaKnown RBP9.29□□□□□ -0.92
SS18-207ENST00000577636 TEKT2Q9UIF3 430 aa9.29□□□□□ -0.92
SS18-207ENST00000577636 ACAD8Q9UKU7 415 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms