RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 TMEM196Q5HYL7 178 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 DMRTC1Q5HYR2 192 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 CDKL4Q5MAI5 379 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 OAFQ86UD1 273 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 AVL9Q8NBF6 648 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 ZBTB44Q8NCP5 570 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 DUSP18Q8NEJ0 188 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 ERMAPQ96PL5 475 aaPredicted RBP7.92□□□□□ -1.14
RPAIN-215ENST00000575112 KCNJ15Q99712 375 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 MICU1Q9BPX6 476 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 ZNF346Q9UL40 294 aaKnown RBP7.92□□□□□ -1.14
RPAIN-215ENST00000575112 PPIEQ9UNP9 301 aaKnown RBP7.92□□□□□ -1.14
RPAIN-215ENST00000575112 ICKQ9UPZ9 632 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 A8MVJ9 347 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 B8ZZF3 427 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 C4orf51C9J302 202 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 E9PI62 339 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 ATP6V1G2-DDX39BF2Z307 99 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 FOXE1O00358 373 aaPredicted RBP7.92□□□□□ -1.14
RPAIN-215ENST00000575112 FAAHO00519 579 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 GABRPO00591 440 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 EMC8O43402 210 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 CEACAM5P06731 702 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 SHC1P29353 583 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 KCNJ5P48544 419 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 MAP2K6P52564 334 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 SNRPGP62308 76 aaKnown RBP7.92□□□□□ -1.14
RPAIN-215ENST00000575112 BTN1A1Q13410 526 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 TRAM2Q15035 370 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 DUSP5Q16690 384 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 AGBL4Q5VU57 503 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 NKAIN2Q5VXU1 208 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 ABHD17CQ6PCB6 329 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 FRRS1Q6ZNA5 592 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 QSOX2Q6ZRP7 698 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 TTLL10Q6ZVT0 673 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 CREB3L2Q70SY1 520 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 COMMD7Q86VX2 200 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 OR52E2Q8NGJ4 325 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 LMX1AQ8TE12 382 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 AKAP1Q92667 903 aaKnown RBP eCLIP7.92□□□□□ -1.14
RPAIN-215ENST00000575112 MS4A6EQ96DS6 147 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 TMEM27Q9HBJ8 222 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 SLC6A20Q9NP91 592 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 TMEM74BQ9NUR3 256 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 ZSCAN32Q9NX65 697 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 KCND3Q9UK17 655 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 YBX2Q9Y2T7 364 aaKnown RBP7.92□□□□□ -1.14
RPAIN-215ENST00000575112 ZNF106Q9H2Y7 1883 aaKnown RBP7.92□□□□□ -1.14
RPAIN-215ENST00000575112 POLEQ07864 2286 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 RPS10-NUDT3A0A1W2PQS6 291 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 SLC9B1P1A6NJY1 282 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 H0YGG7 62 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 PAPLNO95428 1278 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 RAB36O95755 333 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 HPXP02790 462 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 PIPP12273 146 aaPredicted RBP7.92□□□□□ -1.14
RPAIN-215ENST00000575112 PTGS2P35354 604 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 OR1D4P47884 311 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 DCDC1P59894 354 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 ARF3P61204 181 aaPredicted RBP7.92□□□□□ -1.14
RPAIN-215ENST00000575112 MFSD13AQ14CX5 517 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 SLC25A35Q3KQZ1 300 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 FBXO46Q6PJ61 603 aaPredicted RBP7.92□□□□□ -1.14
RPAIN-215ENST00000575112 Q6ZS52 159 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 UBE3DQ7Z6J8 389 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 LRRC25Q8N386 305 aaPredicted RBP7.92□□□□□ -1.14
RPAIN-215ENST00000575112 TMIEQ8NEW7 156 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 OR2L5Q8NG80 312 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 PHOSPHO1Q8TCT1 267 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 RSC1A1Q92681 617 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 FGF11Q92914 225 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 NKD1Q969G9 470 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 NEURL3Q96EH8 262 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 SLC35A4Q96G79 324 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 RBP7Q96R05 134 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 CD180Q99467 661 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 ELF4Q99607 663 aaPredicted RBP7.92□□□□□ -1.14
RPAIN-215ENST00000575112 SLC38A3Q99624 504 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 GTPBP2Q9BX10 602 aaKnown RBP7.92□□□□□ -1.14
RPAIN-215ENST00000575112 ENKD1Q9H0I2 346 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 PCBD2Q9H0N5 130 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 CA14Q9ULX7 337 aa7.92□□□□□ -1.14
RPAIN-215ENST00000575112 CHURC1-FNTBB4DL54 471 aa7.91□□□□□ -1.14
RPAIN-215ENST00000575112 SHOXO15266 292 aa7.91□□□□□ -1.14
RPAIN-215ENST00000575112 PRKAR1AP10644 381 aa7.91□□□□□ -1.14
RPAIN-215ENST00000575112 GIFP27352 417 aa7.91□□□□□ -1.14
RPAIN-215ENST00000575112 SELENOPP49908 381 aa7.91□□□□□ -1.14
RPAIN-215ENST00000575112 ARHGDIBP52566 201 aa7.91□□□□□ -1.14
RPAIN-215ENST00000575112 MELKQ14680 651 aa7.91□□□□□ -1.14
RPAIN-215ENST00000575112 KCNAB1Q14722 419 aa7.91□□□□□ -1.14
RPAIN-215ENST00000575112 SUZ12Q15022 739 aaKnown RBP7.91□□□□□ -1.14
RPAIN-215ENST00000575112 TMEM255AQ5JRV8 349 aa7.91□□□□□ -1.14
RPAIN-215ENST00000575112 FAAP20Q6NZ36 180 aa7.91□□□□□ -1.14
RPAIN-215ENST00000575112 LYPD4Q6UWN0 246 aa7.91□□□□□ -1.14
RPAIN-215ENST00000575112 IDO2Q6ZQW0 420 aa7.91□□□□□ -1.14
RPAIN-215ENST00000575112 MSANTD1Q6ZTZ1 278 aa7.91□□□□□ -1.14
RPAIN-215ENST00000575112 CXXC5Q7LFL8 322 aaKnown RBP7.91□□□□□ -1.14
RPAIN-215ENST00000575112 NRROSQ86YC3 692 aa7.91□□□□□ -1.14
RPAIN-215ENST00000575112 CSNK1A1LQ8N752 337 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms