RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 CRELD1Q96HD1 420 aa26.07■■□□□ 1.76
CTDNEP1-210ENST00000574322 WDR77Q9BQA1 342 aaPredicted RBP26.07■■□□□ 1.76
CTDNEP1-210ENST00000574322 FUNDC2Q9BWH2 189 aa26.07■■□□□ 1.76
CTDNEP1-210ENST00000574322 GPN2Q9H9Y4 310 aaPredicted RBP26.07■■□□□ 1.76
CTDNEP1-210ENST00000574322 ATP13A2Q9NQ11 1180 aa26.07■■□□□ 1.76
CTDNEP1-210ENST00000574322 SELENONQ9NZV5 590 aa26.07■■□□□ 1.76
CTDNEP1-210ENST00000574322 ICAM5Q9UMF0 924 aa26.07■■□□□ 1.76
CTDNEP1-210ENST00000574322 PIEZO1Q92508 2521 aa26.07■■□□□ 1.76
CTDNEP1-210ENST00000574322 A0A087WUJ7 227 aa26.06■■□□□ 1.76
CTDNEP1-210ENST00000574322 ZNF264O43296 627 aa26.06■■□□□ 1.76
CTDNEP1-210ENST00000574322 HMGN1P05114 100 aa26.06■■□□□ 1.76
CTDNEP1-210ENST00000574322 SDHBP21912 280 aa26.06■■□□□ 1.76
CTDNEP1-210ENST00000574322 ABCD3P28288 659 aa26.06■■□□□ 1.76
CTDNEP1-210ENST00000574322 ST13P50502 369 aaKnown RBP26.06■■□□□ 1.76
CTDNEP1-210ENST00000574322 COPZ1P61923 177 aa26.06■■□□□ 1.76
CTDNEP1-210ENST00000574322 PLCXD2Q0VAA5 305 aa26.06■■□□□ 1.76
CTDNEP1-210ENST00000574322 NCF4Q15080 339 aa26.06■■□□□ 1.76
CTDNEP1-210ENST00000574322 PGGHGQ32M88 737 aa26.06■■□□□ 1.76
CTDNEP1-210ENST00000574322 RNLSQ5VYX0 342 aa26.06■■□□□ 1.76
CTDNEP1-210ENST00000574322 CCDC81Q6ZN84 652 aa26.06■■□□□ 1.76
CTDNEP1-210ENST00000574322 GALNT15Q8N3T1 639 aa26.06■■□□□ 1.76
CTDNEP1-210ENST00000574322 OR2T33Q8NG76 320 aa26.06■■□□□ 1.76
CTDNEP1-210ENST00000574322 NUBPLQ8TB37 319 aa26.06■■□□□ 1.76
CTDNEP1-210ENST00000574322 RNF217Q8TC41 542 aa26.06■■□□□ 1.76
CTDNEP1-210ENST00000574322 OMA1Q96E52 524 aa26.06■■□□□ 1.76
CTDNEP1-210ENST00000574322 YIPF6Q96EC8 236 aa26.06■■□□□ 1.76
CTDNEP1-210ENST00000574322 ARSGQ96EG1 525 aa26.06■■□□□ 1.76
CTDNEP1-210ENST00000574322 LAT2Q9GZY6 243 aa26.06■■□□□ 1.76
CTDNEP1-210ENST00000574322 MRPS18AQ9NVS2 196 aaKnown RBP26.06■■□□□ 1.76
CTDNEP1-210ENST00000574322 WARS2Q9UGM6 360 aaKnown RBP26.06■■□□□ 1.76
CTDNEP1-210ENST00000574322 DMXL1Q9Y485 3027 aa26.06■■□□□ 1.76
CTDNEP1-210ENST00000574322 IGHV3-20A0A0C4DH32 117 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 HTR3EA5X5Y0 456 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 B4E171 279 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 ALG1L2C9J202 215 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 NOL3O60936 208 aaKnown RBP26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 ICOSLGO75144 302 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 PTP4A3O75365 173 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 RFPL3O75679 317 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 RCBTB2O95199 551 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 TSPAN7P41732 249 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 FXYD6P3P58550 94 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 SLC43A2Q8N370 569 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 CADM2Q8N3J6 435 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 OR8K3Q8NH51 312 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 LRR1Q96L50 414 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 ZNF582Q96NG8 517 aaPredicted RBP26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 OR52D1Q9H346 318 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 ENPP5Q9UJA9 477 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 CEP250Q9BV73 2442 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 SURF4O15260 269 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 DBTP11182 482 aaKnown RBP26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 CCL4P13236 92 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 ZNF91Q05481 1191 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 WBP2NLQ6ICG8 309 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 SLC30A6Q6NXT4 461 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 HSDL2Q6YN16 418 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 CPEB2Q7Z5Q1 589 aaKnown RBP26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 PRR22Q8IZ63 422 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 PHOSPHO1Q8TCT1 267 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 C3orf49Q96BT1 292 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 VMP1Q96GC9 406 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 SAMD8Q96LT4 415 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 UBQLN3Q9H347 655 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 HHATLQ9HCP6 504 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 C19orf25Q9UFG5 118 aaPredicted RBP26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 SIGLEC7Q9Y286 467 aa26.05■■□□□ 1.76
CTDNEP1-210ENST00000574322 HEATR5AQ86XA9 2040 aa26.04■■□□□ 1.76
CTDNEP1-210ENST00000574322 SPAARA0A1B0GVQ0 90 aa26.04■■□□□ 1.76
CTDNEP1-210ENST00000574322 CDC14CA4D256 554 aa26.04■■□□□ 1.76
CTDNEP1-210ENST00000574322 KDM4EB2RXH2 506 aaPredicted RBP26.04■■□□□ 1.76
CTDNEP1-210ENST00000574322 ATE1O95260 518 aa26.04■■□□□ 1.76
CTDNEP1-210ENST00000574322 IGF2P01344 180 aa26.04■■□□□ 1.76
CTDNEP1-210ENST00000574322 LCKP06239 509 aa26.04■■□□□ 1.76
CTDNEP1-210ENST00000574322 CEACAM1P13688 526 aa26.04■■□□□ 1.76
CTDNEP1-210ENST00000574322 ZNF28P17035 718 aa26.04■■□□□ 1.76
CTDNEP1-210ENST00000574322 NOVA1P51513 510 aaKnown RBP26.04■■□□□ 1.76
CTDNEP1-210ENST00000574322 CLEC12AQ5QGZ9 265 aa26.04■■□□□ 1.76
CTDNEP1-210ENST00000574322 PAPD4Q6PIY7 484 aaKnown RBP26.04■■□□□ 1.76
CTDNEP1-210ENST00000574322 SLC16A12Q6ZSM3 486 aa26.04■■□□□ 1.76
CTDNEP1-210ENST00000574322 CYP4Z2PQ8N1L4 340 aa26.04■■□□□ 1.76
CTDNEP1-210ENST00000574322 FANK1Q8TC84 345 aa26.04■■□□□ 1.76
CTDNEP1-210ENST00000574322 LPAR4Q99677 370 aa26.04■■□□□ 1.76
CTDNEP1-210ENST00000574322 CRB3Q9BUF7 120 aa26.04■■□□□ 1.76
CTDNEP1-210ENST00000574322 SLC19A3Q9BZV2 496 aa26.04■■□□□ 1.76
CTDNEP1-210ENST00000574322 TOR4AQ9NXH8 423 aa26.04■■□□□ 1.76
CTDNEP1-210ENST00000574322 OR6C70A6NIJ9 312 aa26.03■■□□□ 1.76
CTDNEP1-210ENST00000574322 SNTNA6NMZ2 147 aa26.03■■□□□ 1.76
CTDNEP1-210ENST00000574322 EFCAB9A8MZ26 197 aa26.03■■□□□ 1.76
CTDNEP1-210ENST00000574322 PRODHO43272 600 aa26.03■■□□□ 1.76
CTDNEP1-210ENST00000574322 OIP5O43482 229 aa26.03■■□□□ 1.76
CTDNEP1-210ENST00000574322 TMEM44Q2T9K0 475 aa26.03■■□□□ 1.76
CTDNEP1-210ENST00000574322 ZNF517Q6ZMY9 492 aaPredicted RBP26.03■■□□□ 1.76
CTDNEP1-210ENST00000574322 LIN28AQ9H9Z2 209 aaKnown RBP26.03■■□□□ 1.76
CTDNEP1-210ENST00000574322 PCDHGA1Q9Y5H4 931 aa26.03■■□□□ 1.76
CTDNEP1-210ENST00000574322 GTPBP1O00178 669 aaKnown RBP26.02■■□□□ 1.76
CTDNEP1-210ENST00000574322 KPNA4O00629 521 aaPredicted RBP26.02■■□□□ 1.76
CTDNEP1-210ENST00000574322 EIF4E2O60573 245 aaKnown RBP26.02■■□□□ 1.76
CTDNEP1-210ENST00000574322 KLK3P07288 261 aaPredicted RBP26.02■■□□□ 1.76
CTDNEP1-210ENST00000574322 PTNP21246 168 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms