RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 PILRAQ9UKJ1 303 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 CHMP2BQ9UQN3 213 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 BTRCQ9Y297 605 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 DHRS7Q9Y394 339 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 TEX264Q9Y6I9 313 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 IKBKGQ9Y6K9 419 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 KNTC1P50748 2209 aa3.52□□□□□ -1.85
NUP88-202ENST00000570937 GOLGA4Q13439 2230 aaKnown RBP3.51□□□□□ -1.85
NUP88-202ENST00000570937 AKAP13Q12802 2813 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 A0A0J9YY10 115 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 A0A1W2PNU3 283 aaPredicted RBP3.51□□□□□ -1.85
NUP88-202ENST00000570937 A0A1W2PQ09 198 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 MEIOCA2RUB1 952 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 C21orf140B9A014 251 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 TMEM150CB9EJG8 249 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 E7ESA3 106 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 GFYI3L273 518 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 CASC3O15234 703 aaKnown RBP3.51□□□□□ -1.85
NUP88-202ENST00000570937 ATP6V0E1O15342 81 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 RAD51CO43502 376 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 RAD1O60671 282 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 SRPX2O60687 465 aaPredicted RBP3.51□□□□□ -1.85
NUP88-202ENST00000570937 PSIP1O75475 530 aaKnown RBP3.51□□□□□ -1.85
NUP88-202ENST00000570937 OR2B3O76000 313 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 C1orf105O95561 183 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 NGFP01138 241 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 VPREB1P12018 145 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 FOLR1P15328 257 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 UGT2B7P16662 529 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 EFNA1P20827 205 aaPredicted RBP3.51□□□□□ -1.85
NUP88-202ENST00000570937 OAS2P29728 719 aaKnown RBP3.51□□□□□ -1.85
NUP88-202ENST00000570937 CMPK1P30085 196 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 PKLRP30613 574 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 SPRP35270 261 aaPredicted RBP3.51□□□□□ -1.85
NUP88-202ENST00000570937 DLSTP36957 453 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 ETV5P41161 510 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 MAGEA4P43358 317 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 KPNA2P52292 529 aaKnown RBP3.51□□□□□ -1.85
NUP88-202ENST00000570937 AP1S2P56377 157 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 GUCY2DQ02846 1103 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 RELAQ04206 551 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 C2orf54Q08AI8 447 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 NAB1Q13506 487 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 CUL1Q13616 776 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 SLMAPQ14BN4 828 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 SLC5A12Q1EHB4 618 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 KLHL38Q2WGJ6 581 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 ZFP69Q49AA0 526 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 GTDC1Q4AE62 458 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 ACSBG2Q5FVE4 666 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 TCTE1Q5JU00 501 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 FFAR4Q5NUL3 377 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 LGSNQ5TDP6 509 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 STEAP4Q687X5 459 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 FAM45BPQ6NSW5 357 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 PWWP2BQ6NUJ5 590 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 ZNF497Q6ZNH5 498 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 CCDC91Q7Z6B0 441 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 IFT20Q8IY31 132 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 ZNF843Q8N446 348 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 MMGT1Q8N4V1 131 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 TBC1D19Q8N5T2 526 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 ZNF383Q8NA42 475 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 ZNF485Q8NCK3 441 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 MAPK1IP1LQ8NDC0 245 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 OR1J1Q8NGS3 322 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 OR9A1PQ8NGU1 263 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 FAM45AQ8TCE6 357 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 RNF128Q8TEB7 428 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 SNRNP27Q8WVK2 155 aaKnown RBP3.51□□□□□ -1.85
NUP88-202ENST00000570937 IFT81Q8WYA0 676 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 ANKRD7Q92527 254 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 RERGQ96A58 199 aaPredicted RBP3.51□□□□□ -1.85
NUP88-202ENST00000570937 PDLIM5Q96HC4 596 aaKnown RBP3.51□□□□□ -1.85
NUP88-202ENST00000570937 ART5Q96L15 291 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 CATSPER2Q96P56 530 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 OPRPNQ99935 248 aaPredicted RBP3.51□□□□□ -1.85
NUP88-202ENST00000570937 PRORYQ9H606 182 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 XKR8Q9H6D3 395 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 PARVBQ9HBI1 364 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 POPDC3Q9HBV1 291 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 LHX9Q9NQ69 397 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 ZNF701Q9NV72 531 aaPredicted RBP3.51□□□□□ -1.85
NUP88-202ENST00000570937 ANKMY1Q9P2S6 941 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 SNX7Q9UNH6 387 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 PLCL2Q9UPR0 1127 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 PADI2Q9Y2J8 665 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 WBP11Q9Y2W2 641 aaKnown RBP3.51□□□□□ -1.85
NUP88-202ENST00000570937 PYGO1Q9Y3Y4 419 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 ZNF106Q9H2Y7 1883 aaKnown RBP3.51□□□□□ -1.85
NUP88-202ENST00000570937 ZZEF1O43149 2961 aa3.51□□□□□ -1.85
NUP88-202ENST00000570937 PLXNB3Q9ULL4 1909 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 ACACBO00763 2458 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 CEP295Q9C0D2 2601 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 UNC13CQ8NB66 2214 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 ASXL3Q9C0F0 2248 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 TCRBV9S1A1TA0A576 114 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 C9J4A7 227 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 K7ENP7 123 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 ARHGEF9O43307 516 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms