RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 OLFML2AQ68BL7 652 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 TWF2Q6IBS0 349 aaKnown RBP2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 LEG1Q6P5S2 330 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 CNSTQ6PJW8 725 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 UNC5DQ6UXZ4 953 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 WDR88Q6ZMY6 472 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 STX12Q86Y82 276 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 FBXO16Q8IX29 292 aaPredicted RBP2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 SLC7A5P1Q8MH63 180 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 BATF2Q8N1L9 274 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 ARFGAP2Q8N6H7 521 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 LINC00469Q8N7U9 141 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 CCDC112Q8NEF3 446 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 OR13F1Q8NGS4 319 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 ZNF564Q8TBZ8 553 aaPredicted RBP2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 MGARPQ8TDB4 240 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 ZNF606Q8WXB4 792 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 TMEM186Q96B77 213 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 ZNF414Q96IQ9 312 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 ATP6V1G3Q96LB4 118 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 CASD1Q96PB1 797 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 RIOK1Q9BRS2 568 aaKnown RBP2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 TEX13BQ9BXU2 312 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 OPN3Q9H1Y3 402 aaPredicted RBP2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 THAP9Q9H5L6 903 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 TMEM165Q9HC07 324 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 SYTL2Q9HCH5 934 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 MIEF1Q9NQG6 463 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 IL17CQ9P0M4 197 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 SH3BGRL2Q9UJC5 107 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 TMCO1Q9UM00 188 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 CELA1Q9UNI1 258 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 MKI67P46013 3256 aaKnown RBP2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 AKAP11Q9UKA4 1901 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 A0A0C4DFX4 3053 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 MEGF6O75095 1541 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 ATRXP46100 2492 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 TTC21BQ7Z4L5 1316 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 SH3TC1Q8TE82 1336 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 FBLL1A6NHQ2 334 aaKnown RBP2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 NPIPA2E9PIF3 369 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 NVLO15381 856 aaKnown RBP2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 CFLARO15519 480 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 SPOPO43791 374 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 NOL3O60936 208 aaKnown RBP2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 GUCA1CO95843 209 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 PAHP00439 452 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 SLC4A1P02730 911 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 CLTAP09496 248 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 CCDC166P0CW27 439 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 IL10P22301 178 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 LONP1P36776 959 aaKnown RBP2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 HSD17B2P37059 387 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 MAGEA4P43358 317 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 XCR1P46094 333 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 STK19P49842 368 aaPredicted RBP2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 MRPS25P82663 173 aaKnown RBP2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 ZP4Q12836 540 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 IL18R1Q13478 541 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 BTG3Q14201 252 aaPredicted RBP2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 LTBP1Q14766 1721 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 STK38Q15208 465 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 ZNF79Q15937 498 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 WHAMMP3Q1A5X7 153 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 ISXQ2M1V0 245 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 ANKDD1AQ495B1 522 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 ZNF57Q68EA5 555 aaPredicted RBP2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 ETFRF1Q6IPR1 90 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 PNCKQ6P2M8 343 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 SYT10Q6XYQ8 523 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 PAQR9Q6ZVX9 377 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 GOLGA7Q7Z5G4 137 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 TSEN54Q7Z6J9 526 aaKnown RBP2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 VPS36Q86VN1 386 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 GPBP1Q86WP2 473 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 ZNF677Q86XU0 584 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 CEND1Q8N111 149 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 CEP112Q8N8E3 955 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 OR52K1Q8NGK4 314 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 WDR36Q8NI36 951 aaKnown RBP2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 TFB1MQ8WVM0 346 aaKnown RBP2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 IFT81Q8WYA0 676 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 ADIPOR1Q96A54 375 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 FAF2Q96CS3 445 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 ANO10Q9NW15 660 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 SLC39A1Q9NY26 324 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 CNOT2Q9NZN8 540 aaKnown RBP2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 SLC2A6Q9UGQ3 507 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 IL20RAQ9UHF4 553 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 FZR1Q9UM11 496 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 HPCAL4Q9UM19 191 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 CA5BQ9Y2D0 317 aa2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 RBBP6Q7Z6E9 1792 aaKnown RBP2.72□□□□□ -1.97
HERPUD1-212ENST00000567944 NOTCH2Q04721 2471 aa2.71□□□□□ -1.97
HERPUD1-212ENST00000567944 MAP3K19Q56UN5 1328 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 ERICH2A1L162 156 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 LRRIQ4A6NIV6 560 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 OR6C65A6NJZ3 312 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 LRRIQ3A6PVS8 624 aaPredicted RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms