RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 UBL4BQ8N7F7 174 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 ZNF614Q8N883 585 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 CCNYQ8ND76 341 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 OR52E1Q8NGJ3 308 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 OR4C3Q8NH37 302 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 ACTL9Q8TC94 416 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 SLC26A7Q8TE54 656 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 CXorf40AQ8TE69 158 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 TFB1MQ8WVM0 346 aaKnown RBP4.2□□□□□ -1.74
LINC00254-201ENST00000563416 PIH1D2Q8WWB5 315 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 HTR3CQ8WXA8 447 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 KLK6Q92876 244 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 DTD2Q96FN9 168 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 IMP4Q96G21 291 aaKnown RBP4.2□□□□□ -1.74
LINC00254-201ENST00000563416 TRIB3Q96RU7 358 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 VAT1Q99536 393 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 WRAP53Q9BUR4 548 aaKnown RBP4.2□□□□□ -1.74
LINC00254-201ENST00000563416 SLC25A51Q9H1U9 297 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 CARD9Q9H257 536 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 DNAJC4Q9NNZ3 241 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 GDF3Q9NR23 364 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 SLC35D1Q9NTN3 355 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 KCNN3Q9UGI6 736 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 DAPK2Q9UIK4 370 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 PACSIN2Q9UNF0 486 aaPredicted RBP4.2□□□□□ -1.74
LINC00254-201ENST00000563416 CA5BQ9Y2D0 317 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 PPP2R2CQ9Y2T4 447 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 RRP15Q9Y3B9 282 aaKnown RBP4.2□□□□□ -1.74
LINC00254-201ENST00000563416 DMXL2Q8TDJ6 3036 aa4.2□□□□□ -1.74
LINC00254-201ENST00000563416 KMT2BQ9UMN6 2715 aaPredicted RBP4.2□□□□□ -1.74
LINC00254-201ENST00000563416 ACACBO00763 2458 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 TPRP12270 2363 aaKnown RBP4.19□□□□□ -1.74
LINC00254-201ENST00000563416 USP24Q9UPU5 2620 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 HEATR5BQ9P2D3 2071 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 TRAV24A0A0B4J272 114 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 CFAP73A6NFT4 308 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 ANGPT2O15123 496 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 TBX6O95947 436 aaPredicted RBP4.19□□□□□ -1.74
LINC00254-201ENST00000563416 SOD1P00441 154 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 HOXC4P09017 264 aaPredicted RBP4.19□□□□□ -1.74
LINC00254-201ENST00000563416 ALPIP09923 528 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 GIMD1P0DJR0 217 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 ZNF30P17039 623 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 CDH3P22223 829 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 ACP1P24666 158 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 PIK3R1P27986 724 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 TEAD1P28347 426 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 TRIM23P36406 574 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 CETN2P41208 172 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 ARRB1P49407 418 aaPredicted RBP4.19□□□□□ -1.74
LINC00254-201ENST00000563416 STC1P52823 247 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 B3GALT5-AS1P59052 145 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 EIF3EP60228 445 aaKnown RBP4.19□□□□□ -1.74
LINC00254-201ENST00000563416 MAT1AQ00266 395 aaKnown RBP4.19□□□□□ -1.74
LINC00254-201ENST00000563416 SEMG2Q02383 582 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 ILF2Q12905 390 aaKnown RBP4.19□□□□□ -1.74
LINC00254-201ENST00000563416 SGCGQ13326 291 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 FZD2Q14332 565 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 IRF4Q15306 451 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 CDKN3Q16667 212 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 LACTB2Q53H82 288 aaPredicted RBP4.19□□□□□ -1.74
LINC00254-201ENST00000563416 LRRC66Q68CR7 880 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 ZCCHC12Q6PEW1 402 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 MACC1Q6ZN28 852 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 Q6ZSR6 202 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 PTAR1Q7Z6K3 402 aaPredicted RBP4.19□□□□□ -1.74
LINC00254-201ENST00000563416 TMPRSS11BQ86T26 416 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 PARGQ86W56 976 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 MEX3DQ86XN8 651 aaKnown RBP4.19□□□□□ -1.74
LINC00254-201ENST00000563416 NAXDQ8IW45 347 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 ZNF567Q8N184 647 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 RASGEF1AQ8N9B8 481 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 DEFB124Q8NES8 71 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 OR52N5Q8NH56 324 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 SAP25Q8TEE9 199 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 PDCD6IPQ8WUM4 868 aaKnown RBP4.19□□□□□ -1.74
LINC00254-201ENST00000563416 PROX1Q92786 737 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 HAUS1Q96CS2 278 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 AGAP3Q96P47 875 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 ALS2CR12Q96Q35 445 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 SMIM14Q96QK8 99 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 TXN2Q99757 166 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 PRRG4Q9BZD6 226 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 DDX47Q9H0S4 455 aaKnown RBP4.19□□□□□ -1.74
LINC00254-201ENST00000563416 GPN1Q9HCN4 374 aaPredicted RBP4.19□□□□□ -1.74
LINC00254-201ENST00000563416 LZTFL1Q9NQ48 299 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 GPR173Q9NS66 373 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 DNPEPQ9ULA0 475 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 GUCA1BQ9UMX6 200 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 FOXA2Q9Y261 457 aaPredicted RBP4.19□□□□□ -1.74
LINC00254-201ENST00000563416 PLEKHA6Q9Y2H5 1048 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 U3KQV3 271 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 ANKRD11Q6UB99 2663 aaPredicted RBP4.19□□□□□ -1.74
LINC00254-201ENST00000563416 IGF2RP11717 2491 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 ZZEF1O43149 2961 aa4.19□□□□□ -1.74
LINC00254-201ENST00000563416 ACACAQ13085 2346 aa4.18□□□□□ -1.74
LINC00254-201ENST00000563416 ZFHX4Q86UP3 3567 aa4.18□□□□□ -1.74
LINC00254-201ENST00000563416 A0A0B4J203 849 aa4.18□□□□□ -1.74
LINC00254-201ENST00000563416 A0A0J9YWU9 116 aa4.18□□□□□ -1.74
LINC00254-201ENST00000563416 LOC285095A0A1B0GVY8 99 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms