RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 FEM1AQ9BSK4 669 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 TRIM62Q9BVG3 475 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 GPR61Q9BZJ8 451 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 FAM192AQ9GZU8 254 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 GLT8D2Q9H1C3 349 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 RHBGQ9H310 441 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 YY1AP1Q9H869 796 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 POPDC2Q9HBU9 364 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 EXOSC3Q9NQT5 275 aaKnown RBP2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 CUTCQ9NTM9 273 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 HOXC10Q9NYD6 342 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 GALPQ9UBC7 116 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 RSPH14Q9UHP6 348 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 PRPF19Q9UMS4 504 aaKnown RBP2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 POLDIP2Q9Y2S7 368 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 AK6Q9Y3D8 172 aaKnown RBP2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 USP16Q9Y5T5 823 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 RALGAPA1Q6GYQ0 2036 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 CFAP65Q6ZU64 1925 aaKnown RBP2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 A0A1B0GUS0 222 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 SNTNA6NMZ2 147 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 H0Y8G0 127 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 ABCD4O14678 606 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 LSM1O15116 133 aaKnown RBP2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 NBR2O15453 112 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 RS1O15537 224 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 ZNF254O75437 659 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 SRSF10O75494 262 aaKnown RBP2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 SCRG1O75711 98 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 GPX5O75715 221 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 PGK1P00558 417 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 CD55P08174 381 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 SNRPCP09234 159 aaKnown RBP2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 AZU1P20160 251 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 VDAC1P21796 283 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 LEPP41159 167 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 MAGEA9P43362 315 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 GBE1Q04446 702 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 PLD1Q13393 1074 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 VGLL4Q14135 290 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 DPYSL3Q14195 570 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 GANABQ14697 944 aaKnown RBP2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 RCN1Q15293 331 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 SLC15A2Q16348 729 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 C15orf32Q32M92 178 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 ZNF774Q6NX45 483 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 FAHD2BQ6P2I3 314 aaPredicted RBP2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 SLC39A11Q8N1S5 342 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 DHRSXQ8N5I4 330 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 ALLCQ8N6M5 410 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 NECAB1Q8N987 351 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 OR9K2Q8NGE7 335 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 FAF2Q96CS3 445 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 FAHD2AQ96GK7 314 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 COQ2Q96H96 371 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 TMEM80Q96HE8 168 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 TPD52L3Q96J77 140 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 C7orf34Q96L11 122 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 RANBP9Q96S59 729 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 ZBP1Q9H171 429 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 VCPKMTQ9H867 229 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 MCCC2Q9HCC0 563 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 RPS10P5Q9NQ39 176 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 SLC7A10Q9NS82 523 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 CLEC5AQ9NY25 188 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 SLC7A8Q9UHI5 535 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 L3MBTL1Q9Y468 752 aa2.5□□□□□ -2.01
SHCBP1-202ENST00000563219 HCFC1P51610 2035 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 OR2AG2A6NM03 316 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 OR52A4PA6NMU1 304 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 A8MX80 341 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 NPIPA7E9PJI5 369 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 TAPBPO15533 448 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 ZNF264O43296 627 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 PRKYO43930 277 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 ECI2O75521 394 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 H2BFMP0C1H6 154 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 CCDC166P0CW27 439 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 RBMY1CP0DJD4 496 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 NPIPA8P0DM63 369 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 CT45A10P0DMU9 189 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 ETS2P15036 469 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 IMPDH1P20839 514 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 HOXD10P28358 340 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 ADORA2BP29275 332 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 GNA11P29992 359 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 FGF9P31371 208 aaPredicted RBP2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 RPL13AP40429 203 aaKnown RBP2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 ATP5OP48047 213 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 PRKXP51817 358 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 RND3P61587 244 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 TGM3Q08188 693 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 ZNF239Q16600 458 aaKnown RBP2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 EIPR1Q53HC9 387 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 UFSP1Q6NVU6 142 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 CCBE1Q6UXH8 406 aaPredicted RBP2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 Q6ZR54 194 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 NLRP9Q7RTR0 991 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms