RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 SF3A2Q15428 464 aaKnown RBP6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 EIF2S3LQ2VIR3 472 aaKnown RBP6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 CELF3Q5SZQ8 465 aaKnown RBP6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 FAM219BQ5XKK7 198 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 SLC34A3Q8N130 599 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 DMBX1Q8NFW5 382 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 OR52E4Q8NGH9 312 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 HTR3CQ8WXA8 447 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 MTERF3Q96E29 417 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 PGLYRP2Q96PD5 576 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 ERMAPQ96PL5 475 aaPredicted RBP6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 ZNF670Q9BS34 389 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 H2AFJQ9BTM1 129 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 NKX6-2Q9C056 277 aaPredicted RBP6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 ANKRD19PQ9H560 264 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 MCM3APO60318 1980 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 PRAMEF33A0A0G2JMD5 474 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 A0A1B0GVI7 797 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 A0A1W2PQL4 384 aaPredicted RBP6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 C2orf78A6NCI8 922 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 SULT1C2O00338 296 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 PRRG1O14668 218 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 ZNF208O43345 1280 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 PRAMEF10O60809 474 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 LGI1O95970 557 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 KLK3P07288 261 aaPredicted RBP6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 SPI1P17947 270 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 C4BPBP20851 252 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 HOXA9P31269 272 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 SSTR4P31391 388 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 VEGFCP49767 419 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 HSD11B2P80365 405 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 EIF4HQ15056 248 aaKnown RBP6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 RNPS1Q15287 305 aaKnown RBP6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 DCAF12L2Q5VW00 463 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 FAM90A2PQ658T7 463 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 LCTLQ6UWM7 567 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 C3P1Q6ZMU1 363 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 GDPGP1Q6ZNW5 385 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 DET1Q7L5Y6 550 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 TRMT11Q7Z4G4 463 aaKnown RBP6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 ADGRF3Q8IZF5 1079 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 OR4F6Q8NGB9 312 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 TFAP2BQ92481 460 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 SCAMP4Q969E2 229 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 MRPS24Q96EL2 167 aaKnown RBP6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 WDYHV1Q96HA8 205 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 SEMA4CQ9C0C4 833 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 POLR1EQ9GZS1 481 aaKnown RBP6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 TXNRD2Q9NNW7 524 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 TREM1Q9NP99 234 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 SLC22A11Q9NSA0 550 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 TMEM184CQ9NVA4 438 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 PDP1Q9P0J1 537 aaPredicted RBP6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 TSPAN16Q9UKR8 245 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 FZD10Q9ULW2 581 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 STUB1Q9UNE7 303 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 DLGAP4Q9Y2H0 992 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 DNAJC15Q9Y5T4 150 aa6.24□□□□□ -1.41
TSPAN3-209ENST00000560715 ZSWIM8A7E2V4 1837 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 PLXNB2O15031 1838 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 A0A087X1B8 175 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 IGKV6-21A0A0C4DH24 114 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 FAM95CA0A1B0GW59 222 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 C7orf66A4D0T2 115 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 NPIPB11E5RHQ5 1161 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 ATG12O94817 140 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 OR4F21O95013 312 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 ADAP00813 363 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 CD63P08962 238 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 HAPLN1P10915 354 aaPredicted RBP6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 EPHA2P29317 976 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 PCGF2P35227 344 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 KCNJ3P48549 501 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 CRYZQ08257 329 aaKnown RBP6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 DDI2Q5TDH0 399 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 KCTD11Q693B1 232 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 ELP2Q6IA86 826 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 OR4F3Q6IEY1 312 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 FRMPD2BQ6IN97 320 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 HSDL2Q6YN16 418 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 GCNT7Q6ZNI0 430 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 MOB2Q70IA6 237 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 CFAP52Q8N1V2 620 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 Q8N402 240 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 PGBD5Q8N414 524 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 ATP6V1C2Q8NEY4 427 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 SLC24A4Q8NFF2 622 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 C9orf43Q8TAL5 461 aaPredicted RBP6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 ZNF596Q8TC21 504 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 GLYATL2Q8WU03 294 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 EXOSC8Q96B26 276 aaKnown RBP6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 ZNF419Q96HQ0 510 aaPredicted RBP6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 PIWIL1Q96J94 861 aaKnown RBP6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 MEGF10Q96KG7 1140 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 TEX37Q96LM6 180 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 DDOQ99489 341 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 TMEM43Q9BTV4 400 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 MSTO1Q9BUK6 570 aa6.23□□□□□ -1.41
TSPAN3-209ENST00000560715 NTMT1Q9BV86 223 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms