RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 H3BMQ9 156 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 ELK1P19419 428 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 SSTR2P30874 369 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 GKP32189 559 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 OPRL1P41146 370 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 KEAP1Q14145 624 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 RPL7L1Q6DKI1 246 aaKnown RBP13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 DEFB119Q8N690 84 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 SCLYQ96I15 445 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 MAF1Q9H063 256 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 ANKMY1Q9P2S6 941 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 PCDHGA1Q9Y5H4 931 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 TEX264Q9Y6I9 313 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 NDUFB2O95178 105 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 LTBQ06643 244 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 GALNT1Q10472 559 aaPredicted RBP13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 SAMD8Q96LT4 415 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 EGLN3Q9H6Z9 239 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 SLC7A7Q9UM01 511 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 METTL15A6NJ78 407 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 HEXAP06865 529 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 G0S2P27469 103 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 MMP12P39900 470 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 VIPR2P41587 438 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 SLC17A1Q14916 467 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 SOX7Q9BT81 388 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 TTYH3Q9C0H2 523 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 INPP5EQ9NRR6 644 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 ZNF860A6NHJ4 632 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 ADH4P08319 380 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 STAG3L2P0CL84 134 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 OR5H8P0DN80 308 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 FXNQ16595 210 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 ZNF597Q96LX8 424 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 TM7SF3Q9NS93 570 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 TRAPPC2LQ9UL33 140 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 MYBPHLA2RUH7 354 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 IGFN1Q86VF2 1251 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 KDM1BQ8NB78 822 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 SLC41A2Q96JW4 573 aa13.06□□□□□ -0.32
CSPG4P12-202ENST00000559989 MYO5BQ9ULV0 1848 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 STC1P52823 247 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 SORDQ00796 357 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 DUSP28Q4G0W2 176 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 ABHD17BQ5VST6 288 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 NLGN4YQ8NFZ3 816 aaPredicted RBP13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 AKR1E2Q96JD6 320 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 C1orf198Q9H425 327 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 KCNK12Q9HB15 430 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 OR14J1Q9UGF5 321 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 CLTCQ00610 1675 aaKnown RBP13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 KIF1AQ12756 1690 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 LIPCP11150 499 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 CNR2P34972 360 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 SUB1P53999 127 aaKnown RBP eCLIP13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 SLC9A3R2Q15599 337 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 MINDY1Q8N5J2 469 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 DBF4BQ8NFT6 615 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 OR10K1Q8NGX5 313 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 CXXC1Q9P0U4 656 aaPredicted RBP13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 TNFRSF10AO00220 468 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 LYPLA2O95372 231 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 OMGP23515 440 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 AGTR2P50052 363 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 GSCP56915 257 aaPredicted RBP13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 NNATQ16517 81 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 DHRS11Q6UWP2 260 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 TMEM104Q8NE00 496 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 ASB17Q8WXJ9 295 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 C10orf90Q96M02 699 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 TRIB1Q96RU8 372 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 FAM103A1Q9BTL3 118 aaKnown RBP13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 IL25Q9H293 177 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 ABCA6Q8N139 1617 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 HLA-DMAP28067 261 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 GRM7Q14831 915 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 PET117Q6UWS5 81 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 OVCH1Q7RTY7 1134 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 RNF175Q8N4F7 328 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 SIMC1Q8NDZ2 872 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 NSUN3Q9H649 340 aaKnown RBP13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 NIT2Q9NQR4 276 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 ZDHHC7Q9NXF8 308 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 LRIT2A6NDA9 550 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 ACRV1P26436 265 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 CSNK1A1P48729 337 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 RELAQ04206 551 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 ZCCHC11Q5TAX3 1644 aaKnown RBP13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 ECHDC3Q96DC8 303 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 OR7D2Q96RA2 312 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 EXOSC3Q9NQT5 275 aaKnown RBP13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 HNRNPA3P51991 378 aaKnown RBP13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 WDR4P57081 412 aaKnown RBP13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 RPS24P62847 133 aaKnown RBP13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 WDR5BQ86VZ2 330 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 PLXDC1Q8IUK5 500 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 BPIFB2Q8N4F0 458 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 OR52N2Q8NGI0 321 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 CDS1Q92903 461 aa13.05□□□□□ -0.32
CSPG4P12-202ENST00000559989 FAM234AQ9H0X4 552 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms