RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 ZFP90Q8TF47 636 aa15.73■□□□□ 0.11
SMAD3-210ENST00000559092 ZNF524Q96C55 264 aa15.73■□□□□ 0.11
SMAD3-210ENST00000559092 ZG16BQ96DA0 208 aa15.73■□□□□ 0.11
SMAD3-210ENST00000559092 ITCHQ96J02 903 aa15.73■□□□□ 0.11
SMAD3-210ENST00000559092 OR52B2Q96RD2 323 aa15.73■□□□□ 0.11
SMAD3-210ENST00000559092 MED18Q9BUE0 208 aa15.73■□□□□ 0.11
SMAD3-210ENST00000559092 RMND5AQ9H871 391 aa15.73■□□□□ 0.11
SMAD3-210ENST00000559092 PLEKHF2Q9H8W4 249 aa15.73■□□□□ 0.11
SMAD3-210ENST00000559092 EXOSC3Q9NQT5 275 aaKnown RBP15.73■□□□□ 0.11
SMAD3-210ENST00000559092 PRDM4Q9UKN5 801 aa15.73■□□□□ 0.11
SMAD3-210ENST00000559092 USH1CQ9Y6N9 552 aa15.73■□□□□ 0.11
SMAD3-210ENST00000559092 AGAP5A6NIR3 686 aa15.72■□□□□ 0.11
SMAD3-210ENST00000559092 PRKD3O94806 890 aa15.72■□□□□ 0.11
SMAD3-210ENST00000559092 GSNP06396 782 aa15.72■□□□□ 0.11
SMAD3-210ENST00000559092 PPP3CBP16298 524 aa15.72■□□□□ 0.11
SMAD3-210ENST00000559092 APOBEC1P41238 236 aaKnown RBP15.72■□□□□ 0.11
SMAD3-210ENST00000559092 MRPL19P49406 292 aaKnown RBP15.72■□□□□ 0.11
SMAD3-210ENST00000559092 GNA13Q14344 377 aa15.72■□□□□ 0.11
SMAD3-210ENST00000559092 C3orf33Q6P1S2 294 aa15.72■□□□□ 0.11
SMAD3-210ENST00000559092 BEND4Q6ZU67 534 aa15.72■□□□□ 0.11
SMAD3-210ENST00000559092 OLIG3Q7RTU3 272 aa15.72■□□□□ 0.11
SMAD3-210ENST00000559092 HDXQ7Z353 690 aa15.72■□□□□ 0.11
SMAD3-210ENST00000559092 LRRC8CQ8TDW0 803 aa15.72■□□□□ 0.11
SMAD3-210ENST00000559092 SLC25A43Q8WUT9 341 aaPredicted RBP15.72■□□□□ 0.11
SMAD3-210ENST00000559092 MBD6Q96DN6 1003 aa15.72■□□□□ 0.11
SMAD3-210ENST00000559092 TACO1Q9BSH4 297 aaKnown RBP15.72■□□□□ 0.11
SMAD3-210ENST00000559092 SRXN1Q9BYN0 137 aa15.72■□□□□ 0.11
SMAD3-210ENST00000559092 CXXC4Q9H2H0 198 aa15.72■□□□□ 0.11
SMAD3-210ENST00000559092 LIME1Q9H400 295 aa15.72■□□□□ 0.11
SMAD3-210ENST00000559092 CCM2LQ9NUG4 571 aaPredicted RBP15.72■□□□□ 0.11
SMAD3-210ENST00000559092 THUMPD1Q9NXG2 353 aaKnown RBP15.72■□□□□ 0.11
SMAD3-210ENST00000559092 CLEC4AQ9UMR7 237 aa15.72■□□□□ 0.11
SMAD3-210ENST00000559092 NUP214P35658 2090 aaPredicted RBP15.72■□□□□ 0.11
SMAD3-210ENST00000559092 FAM234BA2RU67 622 aa15.71■□□□□ 0.11
SMAD3-210ENST00000559092 C1QCP02747 245 aa15.71■□□□□ 0.11
SMAD3-210ENST00000559092 CRYGSP22914 178 aa15.71■□□□□ 0.11
SMAD3-210ENST00000559092 AGTR1P30556 359 aa15.71■□□□□ 0.11
SMAD3-210ENST00000559092 POLR2JP52435 117 aaKnown RBP15.71■□□□□ 0.11
SMAD3-210ENST00000559092 MERTKQ12866 999 aa15.71■□□□□ 0.11
SMAD3-210ENST00000559092 SYPL1Q16563 259 aa15.71■□□□□ 0.11
SMAD3-210ENST00000559092 TMEM201Q5SNT2 666 aa15.71■□□□□ 0.11
SMAD3-210ENST00000559092 PAMR1Q6UXH9 720 aa15.71■□□□□ 0.11
SMAD3-210ENST00000559092 PLEKHM3Q6ZWE6 761 aa15.71■□□□□ 0.11
SMAD3-210ENST00000559092 FCRLAQ7L513 359 aa15.71■□□□□ 0.11
SMAD3-210ENST00000559092 ARFGAP2Q8N6H7 521 aa15.71■□□□□ 0.11
SMAD3-210ENST00000559092 GOLGA6L1Q8N7Z2 621 aa15.71■□□□□ 0.11
SMAD3-210ENST00000559092 ANKFN1Q8N957 763 aa15.71■□□□□ 0.11
SMAD3-210ENST00000559092 ATP6V1C2Q8NEY4 427 aa15.71■□□□□ 0.11
SMAD3-210ENST00000559092 ROBO4Q8WZ75 1007 aa15.71■□□□□ 0.11
SMAD3-210ENST00000559092 OR10A4Q9H209 315 aa15.71■□□□□ 0.11
SMAD3-210ENST00000559092 SLC38A1Q9H2H9 487 aa15.71■□□□□ 0.11
SMAD3-210ENST00000559092 COQ10BQ9H8M1 238 aa15.71■□□□□ 0.11
SMAD3-210ENST00000559092 VIPAS39Q9H9C1 493 aa15.71■□□□□ 0.11
SMAD3-210ENST00000559092 KLHL28Q9NXS3 571 aa15.71■□□□□ 0.11
SMAD3-210ENST00000559092 KLHL13Q9P2N7 655 aa15.71■□□□□ 0.11
SMAD3-210ENST00000559092 SPIN1Q9Y657 262 aaPredicted RBP15.71■□□□□ 0.11
SMAD3-210ENST00000559092 MED12LQ86YW9 2145 aa15.71■□□□□ 0.11
SMAD3-210ENST00000559092 TEP1Q99973 2627 aaKnown RBP15.7■□□□□ 0.1
SMAD3-210ENST00000559092 PCNX3Q9H6A9 2034 aa15.7■□□□□ 0.1
SMAD3-210ENST00000559092 HMGB1P1B2RPK0 211 aaPredicted RBP15.7■□□□□ 0.1
SMAD3-210ENST00000559092 RAF1P04049 648 aa15.7■□□□□ 0.1
SMAD3-210ENST00000559092 YES1P07947 543 aa15.7■□□□□ 0.1
SMAD3-210ENST00000559092 CHRM4P08173 479 aa15.7■□□□□ 0.1
SMAD3-210ENST00000559092 NR2F1P10589 423 aa15.7■□□□□ 0.1
SMAD3-210ENST00000559092 CCKARP32238 428 aa15.7■□□□□ 0.1
SMAD3-210ENST00000559092 HTR3AP46098 478 aa15.7■□□□□ 0.1
SMAD3-210ENST00000559092 EXOC3L2Q2M3D2 409 aa15.7■□□□□ 0.1
SMAD3-210ENST00000559092 COX20Q5RI15 118 aa15.7■□□□□ 0.1
SMAD3-210ENST00000559092 GRINAQ7Z429 371 aa15.7■□□□□ 0.1
SMAD3-210ENST00000559092 ZNF563Q8TA94 476 aa15.7■□□□□ 0.1
SMAD3-210ENST00000559092 ABHD3Q8WU67 409 aa15.7■□□□□ 0.1
SMAD3-210ENST00000559092 MARK4Q96L34 752 aa15.7■□□□□ 0.1
SMAD3-210ENST00000559092 CCDC106Q9BWC9 280 aa15.7■□□□□ 0.1
SMAD3-210ENST00000559092 HDHD5Q9BXW7 423 aa15.7■□□□□ 0.1
SMAD3-210ENST00000559092 KLHL4Q9C0H6 718 aa15.7■□□□□ 0.1
SMAD3-210ENST00000559092 TCF7L2Q9NQB0 619 aa15.7■□□□□ 0.1
SMAD3-210ENST00000559092 ARGLU1Q9NWB6 273 aaPredicted RBP15.7■□□□□ 0.1
SMAD3-210ENST00000559092 CALML5Q9NZT1 146 aa15.7■□□□□ 0.1
SMAD3-210ENST00000559092 PLEKHA6Q9Y2H5 1048 aa15.7■□□□□ 0.1
SMAD3-210ENST00000559092 GPR52Q9Y2T5 361 aa15.7■□□□□ 0.1
SMAD3-210ENST00000559092 F8P00451 2351 aa15.7■□□□□ 0.1
SMAD3-210ENST00000559092 ANP32DO95626 131 aa15.69■□□□□ 0.1
SMAD3-210ENST00000559092 DBIP07108 87 aaKnown RBP15.69■□□□□ 0.1
SMAD3-210ENST00000559092 RPS4Y1P22090 263 aaKnown RBP15.69■□□□□ 0.1
SMAD3-210ENST00000559092 ENPP1P22413 925 aa15.69■□□□□ 0.1
SMAD3-210ENST00000559092 CLK1P49759 484 aaKnown RBP15.69■□□□□ 0.1
SMAD3-210ENST00000559092 MAP2K6P52564 334 aa15.69■□□□□ 0.1
SMAD3-210ENST00000559092 MVDP53602 400 aa15.69■□□□□ 0.1
SMAD3-210ENST00000559092 STX1BP61266 288 aa15.69■□□□□ 0.1
SMAD3-210ENST00000559092 CSNK2A1P68400 391 aaPredicted RBP15.69■□□□□ 0.1
SMAD3-210ENST00000559092 IRX1P78414 480 aaPredicted RBP15.69■□□□□ 0.1
SMAD3-210ENST00000559092 TTMPQ5BVD1 217 aa15.69■□□□□ 0.1
SMAD3-210ENST00000559092 STAC2Q6ZMT1 411 aa15.69■□□□□ 0.1
SMAD3-210ENST00000559092 TMPPEQ6ZT21 453 aa15.69■□□□□ 0.1
SMAD3-210ENST00000559092 PEX5LQ8IYB4 626 aa15.69■□□□□ 0.1
SMAD3-210ENST00000559092 PNPT1Q8TCS8 783 aaKnown RBP15.69■□□□□ 0.1
SMAD3-210ENST00000559092 ALPK1Q96QP1 1244 aa15.69■□□□□ 0.1
SMAD3-210ENST00000559092 OR5B2Q96R09 309 aa15.69■□□□□ 0.1
SMAD3-210ENST00000559092 CCDC28BQ9BUN5 200 aa15.69■□□□□ 0.1
SMAD3-210ENST00000559092 QRSL1Q9H0R6 528 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms