RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 PRSS50Q9UI38 385 aa13.81□□□□□ -0.2
TPM1-211ENST00000558314 RNF115Q9Y4L5 304 aa13.81□□□□□ -0.2
TPM1-211ENST00000558314 NPIPB9F8W1W9 429 aa13.8□□□□□ -0.2
TPM1-211ENST00000558314 TYROBPO43914 113 aa13.8□□□□□ -0.2
TPM1-211ENST00000558314 SOX30O94993 753 aa13.8□□□□□ -0.2
TPM1-211ENST00000558314 H6PDO95479 791 aa13.8□□□□□ -0.2
TPM1-211ENST00000558314 SERPINE1P05121 402 aa13.8□□□□□ -0.2
TPM1-211ENST00000558314 CHI3L1P36222 383 aaPredicted RBP13.8□□□□□ -0.2
TPM1-211ENST00000558314 SESN3P58005 492 aa13.8□□□□□ -0.2
TPM1-211ENST00000558314 ABCE1P61221 599 aaKnown RBP13.8□□□□□ -0.2
TPM1-211ENST00000558314 RPS4XP62701 263 aaKnown RBP13.8□□□□□ -0.2
TPM1-211ENST00000558314 PPP2R2BQ00005 443 aa13.8□□□□□ -0.2
TPM1-211ENST00000558314 FAPQ12884 760 aa13.8□□□□□ -0.2
TPM1-211ENST00000558314 ATAD3BQ5T9A4 648 aa13.8□□□□□ -0.2
TPM1-211ENST00000558314 C3orf33Q6P1S2 294 aa13.8□□□□□ -0.2
TPM1-211ENST00000558314 EIF3MQ7L2H7 374 aaKnown RBP13.8□□□□□ -0.2
TPM1-211ENST00000558314 LSRQ86X29 649 aaPredicted RBP13.8□□□□□ -0.2
TPM1-211ENST00000558314 GABRG1Q8N1C3 465 aa13.8□□□□□ -0.2
TPM1-211ENST00000558314 SLC43A2Q8N370 569 aa13.8□□□□□ -0.2
TPM1-211ENST00000558314 ZNF611Q8N823 705 aa13.8□□□□□ -0.2
TPM1-211ENST00000558314 AENQ8WTP8 325 aaKnown RBP13.8□□□□□ -0.2
TPM1-211ENST00000558314 LAT2Q9GZY6 243 aa13.8□□□□□ -0.2
TPM1-211ENST00000558314 ESRP2Q9H6T0 727 aaKnown RBP13.8□□□□□ -0.2
TPM1-211ENST00000558314 KCNK9Q9NPC2 374 aa13.8□□□□□ -0.2
TPM1-211ENST00000558314 NGBQ9NPG2 151 aa13.8□□□□□ -0.2
TPM1-211ENST00000558314 KCNE5Q9UJ90 142 aa13.8□□□□□ -0.2
TPM1-211ENST00000558314 USF3Q68DE3 2245 aa13.8□□□□□ -0.2
TPM1-211ENST00000558314 PRR14LQ5THK1 2151 aa13.79□□□□□ -0.2
TPM1-211ENST00000558314 SULT2B1O00204 365 aa13.79□□□□□ -0.2
TPM1-211ENST00000558314 UGT2B17O75795 530 aa13.79□□□□□ -0.2
TPM1-211ENST00000558314 AK1P00568 194 aa13.79□□□□□ -0.2
TPM1-211ENST00000558314 IGHV3-9P01782 118 aa13.79□□□□□ -0.2
TPM1-211ENST00000558314 FESP07332 822 aa13.79□□□□□ -0.2
TPM1-211ENST00000558314 MYZAPP0CAP1 466 aa13.79□□□□□ -0.2
TPM1-211ENST00000558314 PGCP20142 388 aa13.79□□□□□ -0.2
TPM1-211ENST00000558314 CDKN1AP38936 164 aa13.79□□□□□ -0.2
TPM1-211ENST00000558314 ETV4P43268 484 aa13.79□□□□□ -0.2
TPM1-211ENST00000558314 RAC3P60763 192 aa13.79□□□□□ -0.2
TPM1-211ENST00000558314 HPCAP84074 193 aa13.79□□□□□ -0.2
TPM1-211ENST00000558314 SKP2Q13309 424 aa13.79□□□□□ -0.2
TPM1-211ENST00000558314 VEZF1Q14119 521 aa13.79□□□□□ -0.2
TPM1-211ENST00000558314 ARHGAP11BQ3KRB8 267 aa13.79□□□□□ -0.2
TPM1-211ENST00000558314 GPAT3Q53EU6 434 aa13.79□□□□□ -0.2
TPM1-211ENST00000558314 ADAM5Q6NVV9 412 aa13.79□□□□□ -0.2
TPM1-211ENST00000558314 EMBQ6PCB8 327 aa13.79□□□□□ -0.2
TPM1-211ENST00000558314 UBE2J2Q8N2K1 259 aa13.79□□□□□ -0.2
TPM1-211ENST00000558314 MAPK1IP1LQ8NDC0 245 aa13.79□□□□□ -0.2
TPM1-211ENST00000558314 KBTBD8Q8NFY9 601 aa13.79□□□□□ -0.2
TPM1-211ENST00000558314 HSD17B8Q92506 261 aa13.79□□□□□ -0.2
TPM1-211ENST00000558314 FBXW5Q969U6 566 aa13.79□□□□□ -0.2
TPM1-211ENST00000558314 PSD2Q9BQI7 771 aa13.79□□□□□ -0.2
TPM1-211ENST00000558314 NUF2Q9BZD4 464 aa13.79□□□□□ -0.2
TPM1-211ENST00000558314 NMUR2Q9GZQ4 415 aa13.79□□□□□ -0.2
TPM1-211ENST00000558314 OR10A4Q9H209 315 aa13.79□□□□□ -0.2
TPM1-211ENST00000558314 WDR45Q9Y484 360 aa13.79□□□□□ -0.2
TPM1-211ENST00000558314 A0A1W2PP18 115 aa13.78□□□□□ -0.2
TPM1-211ENST00000558314 ESPNB1AK53 854 aa13.78□□□□□ -0.2
TPM1-211ENST00000558314 ZNF814B7Z6K7 855 aa13.78□□□□□ -0.2
TPM1-211ENST00000558314 INAFM1C9JVW0 142 aa13.78□□□□□ -0.2
TPM1-211ENST00000558314 RNASET2O00584 256 aaKnown RBP13.78□□□□□ -0.2
TPM1-211ENST00000558314 SMAD9O15198 467 aaKnown RBP13.78□□□□□ -0.2
TPM1-211ENST00000558314 BGNP21810 368 aa13.78□□□□□ -0.2
TPM1-211ENST00000558314 UQCRC2P22695 453 aa13.78□□□□□ -0.2
TPM1-211ENST00000558314 EDNRAP25101 427 aa13.78□□□□□ -0.2
TPM1-211ENST00000558314 SLC1A6P48664 564 aa13.78□□□□□ -0.2
TPM1-211ENST00000558314 DIO1P49895 249 aa13.78□□□□□ -0.2
TPM1-211ENST00000558314 BSPH1Q075Z2 132 aa13.78□□□□□ -0.2
TPM1-211ENST00000558314 ITGADQ13349 1161 aa13.78□□□□□ -0.2
TPM1-211ENST00000558314 ZNF141Q15928 474 aa13.78□□□□□ -0.2
TPM1-211ENST00000558314 MAPK14Q16539 360 aa13.78□□□□□ -0.2
TPM1-211ENST00000558314 NCMAPQ5T1S8 102 aa13.78□□□□□ -0.2
TPM1-211ENST00000558314 VPS37AQ8NEZ2 397 aa13.78□□□□□ -0.2
TPM1-211ENST00000558314 TMEM234Q8WY98 164 aa13.78□□□□□ -0.2
TPM1-211ENST00000558314 TMEM204Q9BSN7 226 aa13.78□□□□□ -0.2
TPM1-211ENST00000558314 CTPS2Q9NRF8 586 aa13.78□□□□□ -0.2
TPM1-211ENST00000558314 RAP2CQ9Y3L5 183 aa13.78□□□□□ -0.2
TPM1-211ENST00000558314 BCAS1O75363 584 aaPredicted RBP13.77□□□□□ -0.21
TPM1-211ENST00000558314 SOD3P08294 240 aa13.77□□□□□ -0.21
TPM1-211ENST00000558314 PTNP21246 168 aa13.77□□□□□ -0.21
TPM1-211ENST00000558314 OR3A2P47893 321 aa13.77□□□□□ -0.21
TPM1-211ENST00000558314 KHKP50053 298 aa13.77□□□□□ -0.21
TPM1-211ENST00000558314 RPL14P50914 215 aaKnown RBP13.77□□□□□ -0.21
TPM1-211ENST00000558314 TNK1Q13470 666 aa13.77□□□□□ -0.21
TPM1-211ENST00000558314 P2RY6Q15077 328 aa13.77□□□□□ -0.21
TPM1-211ENST00000558314 CLEC12BQ2HXU8 276 aa13.77□□□□□ -0.21
TPM1-211ENST00000558314 SYT14P1Q58G82 188 aa13.77□□□□□ -0.21
TPM1-211ENST00000558314 SLC25A53Q5H9E4 307 aa13.77□□□□□ -0.21
TPM1-211ENST00000558314 SPANXN4Q5MJ08 99 aa13.77□□□□□ -0.21
TPM1-211ENST00000558314 ANXA8L1Q5VT79 327 aa13.77□□□□□ -0.21
TPM1-211ENST00000558314 GALNT5Q7Z7M9 940 aa13.77□□□□□ -0.21
TPM1-211ENST00000558314 LILRB1Q8NHL6 650 aaPredicted RBP13.77□□□□□ -0.21
TPM1-211ENST00000558314 SMAP2Q8WU79 429 aaPredicted RBP13.77□□□□□ -0.21
TPM1-211ENST00000558314 ST8SIA1Q92185 356 aa13.77□□□□□ -0.21
TPM1-211ENST00000558314 ROPN1LQ96C74 230 aa13.77□□□□□ -0.21
TPM1-211ENST00000558314 MUCL1Q96DR8 90 aa13.77□□□□□ -0.21
TPM1-211ENST00000558314 TRMT61AQ96FX7 289 aaKnown RBP13.77□□□□□ -0.21
TPM1-211ENST00000558314 SLC35A5Q9BS91 424 aa13.77□□□□□ -0.21
TPM1-211ENST00000558314 POTEKPQ9BYX7 375 aa13.77□□□□□ -0.21
TPM1-211ENST00000558314 C20orf27Q9GZN8 174 aa13.77□□□□□ -0.21
TPM1-211ENST00000558314 ZNF350Q9GZX5 532 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms