RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 PTNP21246 168 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 GSTM3P21266 225 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 MYF6P23409 242 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 MST1P26927 711 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 MSX1P28360 303 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 POLR2IP36954 125 aaKnown RBP13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 GSSP48637 474 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 HLCSP50747 726 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 NPRL3Q12980 569 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 PDK3Q15120 406 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 QPRTQ15274 297 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 PRAMEF20Q5VT98 475 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 TTC33Q6PID6 262 aaPredicted RBP13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 CD300LDQ6UXZ3 194 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 LINC00114Q6XXX2 140 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 ATG4DQ86TL0 474 aaPredicted RBP13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 NRMQ8IXM6 262 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 PFN4Q8NHR9 129 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 GPR119Q8TDV5 335 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 ZNF524Q96C55 264 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 NTNG2Q96CW9 530 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 FAM46AQ96IP4 442 aaKnown RBP13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 SGCZQ96LD1 299 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 PITX2Q99697 317 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 ANGPTL4Q9BY76 406 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 C12orf10Q9HB07 376 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 TAS2R10Q9NYW0 307 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 REV1Q9UBZ9 1251 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 TMEM5Q9Y2B1 443 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 MED31Q9Y3C7 131 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 HRH3Q9Y5N1 445 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 RIF1Q5UIP0 2472 aaKnown RBP13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 ZFHX2Q9C0A1 2572 aaPredicted RBP13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 LOC100130705A0A1B0GUX0 176 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 ELOA3DA6NLF2 546 aaPredicted RBP13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 B4DXG7 233 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 KLF4O43474 513 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 CDC40O60508 579 aaKnown RBP eCLIP13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 CLIC3O95833 236 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 GNAO1P09471 354 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 PRKAR1AP10644 381 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 PNMTP11086 282 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 OSMP13725 252 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 FPR3P25089 353 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 SLC1A3P43003 542 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 GPR4P46093 362 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 ALDH6A1Q02252 535 aaKnown RBP13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 PRKCDQ05655 676 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 CDC20Q12834 499 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 COX10Q12887 443 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 TSPAN31Q12999 210 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 IL18R1Q13478 541 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 KEAP1Q14145 624 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 TOMM34Q15785 309 aaPredicted RBP13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 ELOA3BQ3SY89 546 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 CRTC2Q53ET0 693 aaPredicted RBP13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 ABHD17BQ5VST6 288 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 SLC22A10Q63ZE4 541 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 MEX3DQ86XN8 651 aaKnown RBP13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 CYP4Z2PQ8N1L4 340 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 ELOA3Q8NG57 546 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 KCNE4Q8WWG9 221 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 FGF11Q92914 225 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 FRMD6Q96NE9 622 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 GPA33Q99795 319 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 ADAM19Q9H013 955 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 UBAP1Q9NZ09 502 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 CNIH4Q9P003 139 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 MED11Q9P086 117 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 POLHQ9Y253 713 aa13.18□□□□□ -0.3
ARHGEF40-208ENST00000557498 ANKRD33BA6NCL7 494 aa13.17□□□□□ -0.3
ARHGEF40-208ENST00000557498 KPNA4O00629 521 aaPredicted RBP13.17□□□□□ -0.3
ARHGEF40-208ENST00000557498 GNB5O14775 395 aa13.17□□□□□ -0.3
ARHGEF40-208ENST00000557498 IFI30P13284 250 aa13.17□□□□□ -0.3
ARHGEF40-208ENST00000557498 TACR3P29371 465 aa13.17□□□□□ -0.3
ARHGEF40-208ENST00000557498 CASRP41180 1078 aa13.17□□□□□ -0.3
ARHGEF40-208ENST00000557498 CYB561P49447 251 aa13.17□□□□□ -0.3
ARHGEF40-208ENST00000557498 CTBP2P56545 445 aa13.17□□□□□ -0.3
ARHGEF40-208ENST00000557498 SOX8P57073 446 aa13.17□□□□□ -0.3
ARHGEF40-208ENST00000557498 ESRRGP62508 458 aa13.17□□□□□ -0.3
ARHGEF40-208ENST00000557498 ZNF691Q5VV52 312 aa13.17□□□□□ -0.3
ARHGEF40-208ENST00000557498 OR5M10Q6IEU7 315 aa13.17□□□□□ -0.3
ARHGEF40-208ENST00000557498 GRINAQ7Z429 371 aa13.17□□□□□ -0.3
ARHGEF40-208ENST00000557498 LSRQ86X29 649 aaPredicted RBP13.17□□□□□ -0.3
ARHGEF40-208ENST00000557498 GALNT16Q8N428 558 aa13.17□□□□□ -0.3
ARHGEF40-208ENST00000557498 FADS6Q8N9I5 356 aa13.17□□□□□ -0.3
ARHGEF40-208ENST00000557498 OR2M3Q8NG83 312 aa13.17□□□□□ -0.3
ARHGEF40-208ENST00000557498 TMEM234Q8WY98 164 aa13.17□□□□□ -0.3
ARHGEF40-208ENST00000557498 ST8SIA1Q92185 356 aa13.17□□□□□ -0.3
ARHGEF40-208ENST00000557498 NR1H4Q96RI1 486 aaPredicted RBP13.17□□□□□ -0.3
ARHGEF40-208ENST00000557498 DSN1Q9H410 356 aa13.17□□□□□ -0.3
ARHGEF40-208ENST00000557498 MEPEQ9NQ76 525 aaPredicted RBP13.17□□□□□ -0.3
ARHGEF40-208ENST00000557498 ANKRD10Q9NXR5 420 aa13.17□□□□□ -0.3
ARHGEF40-208ENST00000557498 STMN3Q9NZ72 180 aa13.17□□□□□ -0.3
ARHGEF40-208ENST00000557498 NDRG4Q9ULP0 352 aaKnown RBP13.17□□□□□ -0.3
ARHGEF40-208ENST00000557498 MSRB2Q9Y3D2 182 aa13.17□□□□□ -0.3
ARHGEF40-208ENST00000557498 PCDHGB6Q9Y5F9 930 aa13.17□□□□□ -0.3
ARHGEF40-208ENST00000557498 GMPPBQ9Y5P6 360 aa13.17□□□□□ -0.3
ARHGEF40-208ENST00000557498 AHCTF1Q8WYP5 2266 aa13.16□□□□□ -0.3
ARHGEF40-208ENST00000557498 DOCK10Q96BY6 2186 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms