RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 GBX2P52951 348 aaPredicted RBP15.07■□□□□ 0
SHMT2-231ENST00000557433 MRPS10P82664 201 aaKnown RBP15.07■□□□□ 0
SHMT2-231ENST00000557433 DHODHQ02127 395 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 PUDPQ08623 228 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 MFSD13AQ14CX5 517 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 AANATQ16613 207 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 AMZ1Q400G9 498 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 ZNF425Q6IV72 752 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 ARHGAP11AQ6P4F7 1023 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 ZNF613Q6PF04 617 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 POMGNT2Q8NAT1 580 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 C17orf47Q8NEP4 570 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 OR7G2Q8NG99 324 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 C15orf40Q8WUR7 153 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 BPIFA2Q96DR5 249 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 SMIM19Q96E16 107 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 ZFP3Q96NJ6 502 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 LGR4Q9BXB1 951 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 HCAR1Q9BXC0 346 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 GSX2Q9BZM3 304 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 C20orf85Q9H1P6 137 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 WDR26Q9H7D7 661 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 BRD7Q9NPI1 651 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 DEC1Q9P2X7 70 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 APOBEC3BQ9UH17 382 aaKnown RBP15.07■□□□□ 0
SHMT2-231ENST00000557433 MUC22E2RYF6 1773 aaPredicted RBP15.07■□□□□ 0
SHMT2-231ENST00000557433 ZNF879B4DU55 563 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 MEN1O00255 615 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 PDCD5O14737 125 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 TPPPO94811 219 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 LAMP2P13473 410 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 ATF1P18846 271 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 NDUFS1P28331 727 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 NTHL1P78549 312 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 TNFRSF17Q02223 184 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 ZNF234Q14588 700 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 LTB4RQ15722 352 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 ZCCHC12Q6PEW1 402 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 FAM111BQ6SJ93 734 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 SIX5Q8N196 739 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 SPICQ8N5J4 248 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 OR4K14Q8NGD5 310 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 THAP4Q8WY91 577 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 OR51V1Q9H2C8 321 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 XKR8Q9H6D3 395 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 POLE3Q9NRF9 147 aa15.07■□□□□ 0
SHMT2-231ENST00000557433 PHPT1Q9NRX4 125 aaPredicted RBP15.07■□□□□ 0
SHMT2-231ENST00000557433 A0A1W2PS29 197 aa15.06■□□□□ 0
SHMT2-231ENST00000557433 ZC3H12DA2A288 527 aaKnown RBP15.06■□□□□ 0
SHMT2-231ENST00000557433 M0R233 179 aa15.06■□□□□ 0
SHMT2-231ENST00000557433 GPRIN2O60269 458 aa15.06■□□□□ 0
SHMT2-231ENST00000557433 PTP4A3O75365 173 aa15.06■□□□□ 0
SHMT2-231ENST00000557433 OR2T7P0C7T2 308 aa15.06■□□□□ 0
SHMT2-231ENST00000557433 HTR2AP28223 471 aa15.06■□□□□ 0
SHMT2-231ENST00000557433 SLC6A6P31641 620 aa15.06■□□□□ 0
SHMT2-231ENST00000557433 PYCR1P32322 319 aa15.06■□□□□ 0
SHMT2-231ENST00000557433 SLC16A1P53985 500 aa15.06■□□□□ 0
SHMT2-231ENST00000557433 OR12D2P58182 307 aa15.06■□□□□ 0
SHMT2-231ENST00000557433 SRP54P61011 504 aaKnown RBP15.06■□□□□ 0
SHMT2-231ENST00000557433 ILF3Q12906 894 aaKnown RBP eCLIP15.06■□□□□ 0
SHMT2-231ENST00000557433 SUZ12Q15022 739 aaKnown RBP15.06■□□□□ 0
SHMT2-231ENST00000557433 CDK5R1Q15078 307 aa15.06■□□□□ 0
SHMT2-231ENST00000557433 EXOSC6Q5RKV6 272 aaKnown RBP15.06■□□□□ 0
SHMT2-231ENST00000557433 RPL22L1Q6P5R6 122 aaKnown RBP15.06■□□□□ 0
SHMT2-231ENST00000557433 GLRX5Q86SX6 157 aa15.06■□□□□ 0
SHMT2-231ENST00000557433 BPHLQ86WA6 291 aaPredicted RBP15.06■□□□□ 0
SHMT2-231ENST00000557433 OR6V1Q8N148 313 aa15.06■□□□□ 0
SHMT2-231ENST00000557433 ZNF687Q8N1G0 1237 aa15.06■□□□□ 0
SHMT2-231ENST00000557433 OR52E1Q8NGJ3 308 aa15.06■□□□□ 0
SHMT2-231ENST00000557433 OR2T27Q8NH04 317 aa15.06■□□□□ 0
SHMT2-231ENST00000557433 OR51Q1Q8NH59 317 aa15.06■□□□□ 0
SHMT2-231ENST00000557433 NT5CQ8TCD5 201 aa15.06■□□□□ 0
SHMT2-231ENST00000557433 SUSD6Q92537 303 aa15.06■□□□□ 0
SHMT2-231ENST00000557433 DACT3Q96B18 629 aaPredicted RBP15.06■□□□□ 0
SHMT2-231ENST00000557433 ZNF559Q9BR84 538 aa15.06■□□□□ 0
SHMT2-231ENST00000557433 NRIP3Q9NQ35 241 aa15.06■□□□□ 0
SHMT2-231ENST00000557433 DUSP22Q9NRW4 184 aa15.06■□□□□ 0
SHMT2-231ENST00000557433 MED9Q9NWA0 146 aa15.06■□□□□ 0
SHMT2-231ENST00000557433 RPS6KB2Q9UBS0 482 aa15.06■□□□□ 0
SHMT2-231ENST00000557433 HEBP2Q9Y5Z4 205 aa15.06■□□□□ 0
SHMT2-231ENST00000557433 MYO10Q9HD67 2058 aa15.06■□□□□ 0
SHMT2-231ENST00000557433 A0A1B0GVC2 190 aa15.05■□□□□ 0
SHMT2-231ENST00000557433 IGLON5A6NGN9 336 aa15.05■□□□□ 0
SHMT2-231ENST00000557433 A6NIN4 97 aa15.05■□□□□ 0
SHMT2-231ENST00000557433 MPC2O95563 127 aa15.05■□□□□ 0
SHMT2-231ENST00000557433 UBL4AP11441 157 aa15.05■□□□□ 0
SHMT2-231ENST00000557433 SNRPBP14678 240 aaKnown RBP15.05■□□□□ 0
SHMT2-231ENST00000557433 CPN1P15169 458 aa15.05■□□□□ 0
SHMT2-231ENST00000557433 PSMB1P20618 241 aaKnown RBP15.05■□□□□ 0
SHMT2-231ENST00000557433 ACVR1BP36896 505 aa15.05■□□□□ 0
SHMT2-231ENST00000557433 GDNFP39905 211 aa15.05■□□□□ 0
SHMT2-231ENST00000557433 CCR6P51684 374 aa15.05■□□□□ 0
SHMT2-231ENST00000557433 RPS15AP62244 130 aaKnown RBP15.05■□□□□ 0
SHMT2-231ENST00000557433 BTN3A2P78410 334 aa15.05■□□□□ 0
SHMT2-231ENST00000557433 RPL6Q02878 288 aaKnown RBP15.05■□□□□ 0
SHMT2-231ENST00000557433 GGTLC2Q14390 218 aa15.05■□□□□ 0
SHMT2-231ENST00000557433 POU4F3Q15319 338 aa15.05■□□□□ 0
SHMT2-231ENST00000557433 DUSP5Q16690 384 aa15.05■□□□□ 0
SHMT2-231ENST00000557433 TCEAL5Q5H9L2 206 aa15.05■□□□□ 0
SHMT2-231ENST00000557433 FAAH2Q6GMR7 532 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms