RNA–Protein interactions for RNA: ENST00000557203.1

DCAF4-215, Transcript of DDB1 and CUL4 associated factor 4, human

TSL 4

Gene DCAF4, Length 524 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCAF4-215	ENST00000557203	ADH6	P28332	368 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	RBM34	P42696	430 aa	Known RBP	13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	HTR3A	P46098	478 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	DNASE1L1	P49184	302 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	DSCR4	P56555	118 aa	Predicted RBP	13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	SESN3	P58005	492 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	CXADR	P78310	365 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	FOXO1	Q12778	655 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	QPRT	Q15274	297 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	INPP5J	Q15735	1006 aa	Predicted RBP	13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	SLC25A53	Q5H9E4	307 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	ALG10B	Q5I7T1	473 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	DCST1	Q5T197	706 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	OR5M10	Q6IEU7	315 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	LINC00114	Q6XXX2	140 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	GRINA	Q7Z429	371 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	EPHX4	Q8IUS5	362 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	SULF2	Q8IWU5	870 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	CADM2	Q8N3J6	435 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	ZADH2	Q8N4Q0	377 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	ICA1L	Q8NDH6	482 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	OR2M7	Q8NG81	312 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	SLC7A13	Q8TCU3	470 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	SLC38A4	Q969I6	547 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	EME1	Q96AY2	570 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	ZBTB8A	Q96BR9	441 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	MRGPRX4	Q96LA9	322 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	HS6ST2	Q96MM7	605 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	ALPK1	Q96QP1	1244 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	PRSS27	Q9BQR3	290 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	GABARAPL1	Q9H0R8	117 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	ZFP64	Q9NPA5	681 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	CTPS2	Q9NRF8	586 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	MED17	Q9NVC6	651 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	SELENON	Q9NZV5	590 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	RHCG	Q9UBD6	479 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	FBXL2	Q9UKC9	423 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	SLC7A7	Q9UM01	511 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	MRPS18C	Q9Y3D5	142 aa	Known RBP	13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	HRH3	Q9Y5N1	445 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203		U3KQV3	271 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	LAMA5	O15230	3695 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	PTPRQ	Q9UMZ3	2332 aa		13.44	□□□□□ -0.26
DCAF4-215	ENST00000557203	FRY	Q5TBA9	3013 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203		A0A087WUJ7	227 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203		A0A0G2JMM0	328 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203		A0A1W2PPB8	328 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203		A0A1W2PRS3	328 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	C7orf72	A4D263	438 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	LRRC3C	A6NJW4	275 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	KIR3DP1	A8MWS1	328 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	FAM47E-STBD1	D6RA91	191 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	PEX1	O43933	1283 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	NTN1	O95631	604 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	GP1BB	P13224	206 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	PEX2	P28328	305 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	SRD5A2	P31213	254 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	PTDSS1	P48651	473 aa	Known RBP	13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	ZNF41	P51814	821 aa	Predicted RBP	13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	MAP2K6	P52564	334 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	IST1	P53990	364 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	TOMM34	Q15785	309 aa	Predicted RBP	13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	MICA	Q29983	383 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	EXOC3L2	Q2M3D2	409 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	HYAL4	Q2M3T9	481 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	PLPPR5	Q32ZL2	321 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	GLYR1	Q49A26	553 aa	Predicted RBP	13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	ZNF766	Q5HY98	468 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	TMEM179B	Q7Z7N9	219 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	ATG4D	Q86TL0	474 aa	Predicted RBP	13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	RNF113B	Q8IZP6	322 aa	Known RBP	13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	OR52J3	Q8NH60	311 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	ACOT11	Q8WXI4	607 aa	Predicted RBP	13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	ZNF524	Q96C55	264 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	SDCCAG3	Q96C92	435 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	KLHDC3	Q9BQ90	382 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	VCX3B	Q9H321	246 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	UBQLN3	Q9H347	655 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	PCNX3	Q9H6A9	2034 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	TUBA8	Q9NY65	449 aa	Predicted RBP	13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	TMCC3	Q9ULS5	477 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	C15orf41	Q9Y2V0	281 aa		13.43	□□□□□ -0.26
DCAF4-215	ENST00000557203	DMXL2	Q8TDJ6	3036 aa		13.42	□□□□□ -0.26
DCAF4-215	ENST00000557203	TRBV4-1	A0A0J9YWV2	114 aa		13.42	□□□□□ -0.26
DCAF4-215	ENST00000557203	SH3PXD2B	A1X283	911 aa		13.42	□□□□□ -0.26
DCAF4-215	ENST00000557203		G3V3Y1	287 aa		13.42	□□□□□ -0.26
DCAF4-215	ENST00000557203	GLS	O94925	669 aa	Predicted RBP	13.42	□□□□□ -0.26
DCAF4-215	ENST00000557203	CCNB2	O95067	398 aa		13.42	□□□□□ -0.26
DCAF4-215	ENST00000557203	IGF2	P01344	180 aa		13.42	□□□□□ -0.26
DCAF4-215	ENST00000557203	ZNF17	P17021	662 aa		13.42	□□□□□ -0.26
DCAF4-215	ENST00000557203	FUT4	P22083	530 aa		13.42	□□□□□ -0.26
DCAF4-215	ENST00000557203	APOBEC1	P41238	236 aa	Known RBP	13.42	□□□□□ -0.26
DCAF4-215	ENST00000557203	EIF1	P41567	113 aa	Known RBP	13.42	□□□□□ -0.26
DCAF4-215	ENST00000557203	POLR2H	P52434	150 aa	Known RBP	13.42	□□□□□ -0.26
DCAF4-215	ENST00000557203	GPR85	P60893	370 aa		13.42	□□□□□ -0.26
DCAF4-215	ENST00000557203	PPP1R8	Q12972	351 aa	Known RBP	13.42	□□□□□ -0.26
DCAF4-215	ENST00000557203	FGD3	Q5JSP0	725 aa		13.42	□□□□□ -0.26
DCAF4-215	ENST00000557203	PODNL1	Q6PEZ8	512 aa		13.42	□□□□□ -0.26
DCAF4-215	ENST00000557203	ARSK	Q6UWY0	536 aa		13.42	□□□□□ -0.26
DCAF4-215	ENST00000557203	GALNTL5	Q7Z4T8	443 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms