RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 HPCAP84074 193 aa12.24□□□□□ -0.45
SNX6-203ENST00000555416 MRPL2Q5T653 305 aaKnown RBP12.24□□□□□ -0.45
SNX6-203ENST00000555416 PPP4R4Q6NUP7 873 aa12.24□□□□□ -0.45
SNX6-203ENST00000555416 ZNF474Q6S9Z5 364 aaPredicted RBP12.24□□□□□ -0.45
SNX6-203ENST00000555416 DLEU7Q6UYE1 221 aa12.24□□□□□ -0.45
SNX6-203ENST00000555416 ESPNLQ6ZVH7 1005 aa12.24□□□□□ -0.45
SNX6-203ENST00000555416 RETREG3Q86VR2 466 aa12.24□□□□□ -0.45
SNX6-203ENST00000555416 ZZZ3Q8IYH5 903 aa12.24□□□□□ -0.45
SNX6-203ENST00000555416 TMEM19Q96HH6 336 aa12.24□□□□□ -0.45
SNX6-203ENST00000555416 LURAP1Q96LR2 239 aa12.24□□□□□ -0.45
SNX6-203ENST00000555416 RBM24Q9BX46 236 aaKnown RBP12.24□□□□□ -0.45
SNX6-203ENST00000555416 TMEM120AQ9BXJ8 343 aa12.24□□□□□ -0.45
SNX6-203ENST00000555416 MTHFD2LQ9H903 347 aaPredicted RBP12.24□□□□□ -0.45
SNX6-203ENST00000555416 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.24□□□□□ -0.45
SNX6-203ENST00000555416 ACER3Q9NUN7 267 aa12.24□□□□□ -0.45
SNX6-203ENST00000555416 P2RX2Q9UBL9 471 aa12.24□□□□□ -0.45
SNX6-203ENST00000555416 PACSIN3Q9UKS6 424 aa12.24□□□□□ -0.45
SNX6-203ENST00000555416 SLC35A3Q9Y2D2 325 aa12.24□□□□□ -0.45
SNX6-203ENST00000555416 HRNRQ86YZ3 2850 aaPredicted RBP12.24□□□□□ -0.45
SNX6-203ENST00000555416 BMP2P12643 396 aa12.23□□□□□ -0.45
SNX6-203ENST00000555416 PGCP20142 388 aa12.23□□□□□ -0.45
SNX6-203ENST00000555416 SSTR2P30874 369 aa12.23□□□□□ -0.45
SNX6-203ENST00000555416 MAGEA8P43361 318 aa12.23□□□□□ -0.45
SNX6-203ENST00000555416 CARD18P57730 90 aa12.23□□□□□ -0.45
SNX6-203ENST00000555416 MERTKQ12866 999 aa12.23□□□□□ -0.45
SNX6-203ENST00000555416 MYBPHQ13203 477 aa12.23□□□□□ -0.45
SNX6-203ENST00000555416 OR2A2Q6IF42 318 aa12.23□□□□□ -0.45
SNX6-203ENST00000555416 ZNF836Q6ZNA1 936 aa12.23□□□□□ -0.45
SNX6-203ENST00000555416 PLEKHM3Q6ZWE6 761 aa12.23□□□□□ -0.45
SNX6-203ENST00000555416 CLIP4Q8N3C7 705 aa12.23□□□□□ -0.45
SNX6-203ENST00000555416 LINC01560Q8TB33 94 aa12.23□□□□□ -0.45
SNX6-203ENST00000555416 WDR60Q8WVS4 1066 aa12.23□□□□□ -0.45
SNX6-203ENST00000555416 OIT3Q8WWZ8 545 aa12.23□□□□□ -0.45
SNX6-203ENST00000555416 ST8SIA1Q92185 356 aa12.23□□□□□ -0.45
SNX6-203ENST00000555416 DNAJA3Q96EY1 480 aa12.23□□□□□ -0.45
SNX6-203ENST00000555416 CCDC106Q9BWC9 280 aa12.23□□□□□ -0.45
SNX6-203ENST00000555416 MCCC2Q9HCC0 563 aa12.23□□□□□ -0.45
SNX6-203ENST00000555416 CTPS2Q9NRF8 586 aa12.23□□□□□ -0.45
SNX6-203ENST00000555416 KCNN3Q9UGI6 736 aa12.23□□□□□ -0.45
SNX6-203ENST00000555416 MPDZO75970 2070 aa12.23□□□□□ -0.45
SNX6-203ENST00000555416 IGHV3-15A0A0B4J1V0 119 aa12.22□□□□□ -0.45
SNX6-203ENST00000555416 A0A1W2PP18 115 aa12.22□□□□□ -0.45
SNX6-203ENST00000555416 CRHP06850 196 aa12.22□□□□□ -0.45
SNX6-203ENST00000555416 GKN3PP0CG01 181 aa12.22□□□□□ -0.45
SNX6-203ENST00000555416 PRG2P13727 222 aa12.22□□□□□ -0.45
SNX6-203ENST00000555416 ENPP1P22413 925 aa12.22□□□□□ -0.45
SNX6-203ENST00000555416 KIR2DL3P43628 341 aa12.22□□□□□ -0.45
SNX6-203ENST00000555416 EEF1A1P68104 462 aaKnown RBP12.22□□□□□ -0.45
SNX6-203ENST00000555416 FAM27E3Q08E93 113 aa12.22□□□□□ -0.45
SNX6-203ENST00000555416 SELENBP1Q13228 472 aa12.22□□□□□ -0.45
SNX6-203ENST00000555416 ZNF239Q16600 458 aaKnown RBP12.22□□□□□ -0.45
SNX6-203ENST00000555416 COMTD1Q86VU5 262 aa12.22□□□□□ -0.45
SNX6-203ENST00000555416 ADGRG3Q86Y34 549 aa12.22□□□□□ -0.45
SNX6-203ENST00000555416 ARFGAP2Q8N6H7 521 aa12.22□□□□□ -0.45
SNX6-203ENST00000555416 ZNF610Q8N9Z0 462 aa12.22□□□□□ -0.45
SNX6-203ENST00000555416 OR52P1PQ8NH57 321 aa12.22□□□□□ -0.45
SNX6-203ENST00000555416 ABHD3Q8WU67 409 aa12.22□□□□□ -0.45
SNX6-203ENST00000555416 ZNF559Q9BR84 538 aa12.22□□□□□ -0.45
SNX6-203ENST00000555416 CPPED1Q9BRF8 314 aaPredicted RBP12.22□□□□□ -0.45
SNX6-203ENST00000555416 PRRG4Q9BZD6 226 aa12.22□□□□□ -0.45
SNX6-203ENST00000555416 PIGMQ9H3S5 423 aa12.22□□□□□ -0.45
SNX6-203ENST00000555416 A4GALTQ9NPC4 353 aa12.22□□□□□ -0.45
SNX6-203ENST00000555416 EXOSC3Q9NQT5 275 aaKnown RBP12.22□□□□□ -0.45
SNX6-203ENST00000555416 TMEM45AQ9NWC5 275 aa12.22□□□□□ -0.45
SNX6-203ENST00000555416 STOML1Q9UBI4 398 aa12.22□□□□□ -0.45
SNX6-203ENST00000555416 ZNF443Q9Y2A4 671 aaPredicted RBP12.22□□□□□ -0.45
SNX6-203ENST00000555416 CREBBPQ92793 2442 aa12.21□□□□□ -0.45
SNX6-203ENST00000555416 CDHR4A6H8M9 788 aa12.21□□□□□ -0.45
SNX6-203ENST00000555416 FBP2O00757 339 aa12.21□□□□□ -0.45
SNX6-203ENST00000555416 MSTNO14793 375 aa12.21□□□□□ -0.45
SNX6-203ENST00000555416 SS18L1O75177 396 aaPredicted RBP12.21□□□□□ -0.45
SNX6-203ENST00000555416 SYNGR4O95473 234 aa12.21□□□□□ -0.45
SNX6-203ENST00000555416 DBIP07108 87 aaKnown RBP12.21□□□□□ -0.45
SNX6-203ENST00000555416 VIMP08670 466 aaKnown RBP12.21□□□□□ -0.45
SNX6-203ENST00000555416 IL7RP16871 459 aa12.21□□□□□ -0.45
SNX6-203ENST00000555416 CCKARP32238 428 aa12.21□□□□□ -0.45
SNX6-203ENST00000555416 ACAA2P42765 397 aaKnown RBP12.21□□□□□ -0.45
SNX6-203ENST00000555416 CPA2P48052 419 aa12.21□□□□□ -0.45
SNX6-203ENST00000555416 IDH2P48735 452 aaKnown RBP12.21□□□□□ -0.45
SNX6-203ENST00000555416 CRISP3P54108 245 aa12.21□□□□□ -0.45
SNX6-203ENST00000555416 EPS8Q12929 822 aa12.21□□□□□ -0.45
SNX6-203ENST00000555416 SELPLGQ14242 412 aa12.21□□□□□ -0.45
SNX6-203ENST00000555416 ADRM1Q16186 407 aa12.21□□□□□ -0.45
SNX6-203ENST00000555416 FAM214BQ7L5A3 538 aa12.21□□□□□ -0.45
SNX6-203ENST00000555416 CMIPQ8IY22 773 aa12.21□□□□□ -0.45
SNX6-203ENST00000555416 PEX5LQ8IYB4 626 aa12.21□□□□□ -0.45
SNX6-203ENST00000555416 NFKBIDQ8NI38 313 aa12.21□□□□□ -0.45
SNX6-203ENST00000555416 ZNF563Q8TA94 476 aa12.21□□□□□ -0.45
SNX6-203ENST00000555416 RNF128Q8TEB7 428 aa12.21□□□□□ -0.45
SNX6-203ENST00000555416 NRGNQ92686 78 aa12.21□□□□□ -0.45
SNX6-203ENST00000555416 ARL5BQ96KC2 179 aa12.21□□□□□ -0.45
SNX6-203ENST00000555416 OR5B2Q96R09 309 aa12.21□□□□□ -0.45
SNX6-203ENST00000555416 OR11A1Q9GZK7 315 aa12.21□□□□□ -0.45
SNX6-203ENST00000555416 CCDC134Q9H6E4 229 aa12.21□□□□□ -0.45
SNX6-203ENST00000555416 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.21□□□□□ -0.45
SNX6-203ENST00000555416 ING1Q9UK53 422 aaPredicted RBP12.21□□□□□ -0.45
SNX6-203ENST00000555416 MCTS1Q9ULC4 181 aaKnown RBP12.21□□□□□ -0.45
SNX6-203ENST00000555416 GMEB1Q9Y692 573 aa12.21□□□□□ -0.45
SNX6-203ENST00000555416 OTOGQ6ZRI0 2925 aa12.21□□□□□ -0.46
SNX6-203ENST00000555416 SPG11Q96JI7 2443 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms