RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 RAB3BP20337 219 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 PITPNBP48739 271 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 PXNP49023 591 aaPredicted RBP11□□□□□ -0.65
XRCC3-208ENST00000554811 MAT1AQ00266 395 aaKnown RBP11□□□□□ -0.65
XRCC3-208ENST00000554811 DPTQ07507 201 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 SQSTM1Q13501 440 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 TMEM201Q5SNT2 666 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 PRR23CQ6ZRP0 262 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 MBOAT2Q6ZWT7 520 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 MEPCEQ7L2J0 689 aaKnown RBP11□□□□□ -0.65
XRCC3-208ENST00000554811 C1orf216Q8TAB5 229 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 SIPA1Q96FS4 1042 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 TOX2Q96NM4 488 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 FUZQ9BT04 418 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 TMEM43Q9BTV4 400 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 AUNIPQ9H7T9 357 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 TMEM5Q9Y2B1 443 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 A0A0A6YYJ9 748 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 TVP23AA6NH52 213 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 FGF17O60258 216 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 ZIC2O95409 532 aaPredicted RBP11□□□□□ -0.65
XRCC3-208ENST00000554811 CSN2P05814 226 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 CEACAM5P06731 702 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 MAOBP27338 520 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 PPP1CAP62136 330 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 ERVK-25P63136 954 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 FOXK2Q01167 660 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 SNTB2Q13425 540 aaKnown RBP11□□□□□ -0.65
XRCC3-208ENST00000554811 RUNX2Q13950 521 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 FIGLAQ6QHK4 219 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 TAF8Q7Z7C8 310 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 MSANTD3Q96H12 275 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 PEX11GQ96HA9 241 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 ASB16Q96NS5 453 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 DERL3Q96Q80 235 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 GAL3ST4Q96RP7 486 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 SDF2Q99470 211 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 DPAGT1Q9H3H5 408 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 IL23AQ9NPF7 189 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 TMEM138Q9NPI0 162 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 SLC23A1Q9UHI7 598 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 TRAPPC4Q9Y296 219 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 CACNG2Q9Y698 323 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 DENND4CQ5VZ89 1909 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 LOC100509620A0A075B734 347 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 ARRDC5A6NEK1 342 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 B4DGG1 531 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 RCBTB2O95199 551 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 ITPKBP27987 946 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 HTR1FP30939 366 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 RPS5P46782 204 aaKnown RBP11□□□□□ -0.65
XRCC3-208ENST00000554811 RPS21P63220 83 aaKnown RBP11□□□□□ -0.65
XRCC3-208ENST00000554811 TEKQ02763 1124 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 SF3A2Q15428 464 aaKnown RBP11□□□□□ -0.65
XRCC3-208ENST00000554811 ADAMTSL4Q6UY14 1074 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 WDR88Q6ZMY6 472 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 UBE2Q1Q7Z7E8 422 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 SIAH3Q8IW03 269 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 GJD3Q8N144 294 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 OR9A4Q8NGU2 314 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 OR2T35Q8NGX2 323 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 ABHD4Q8TB40 342 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 OR1E3Q8WZA6 343 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 ZNF707Q96C28 371 aaPredicted RBP11□□□□□ -0.65
XRCC3-208ENST00000554811 ABHD1Q96SE0 405 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 SYNDIG1Q9H7V2 258 aa11□□□□□ -0.65
XRCC3-208ENST00000554811 LINC01553A4QN01 128 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 FLRT2O43155 660 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 CTSVO60911 334 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 PKLRP30613 574 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 IGFALSP35858 605 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 ZNF628Q5EBL2 1059 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 TMEM91Q6ZNR0 172 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 RTL4Q6ZR62 310 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 CEP76Q8TAP6 659 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 LINC00615Q96LM1 132 aaPredicted RBP10.99□□□□□ -0.65
XRCC3-208ENST00000554811 NMNAT3Q96T66 252 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 TEAD3Q99594 435 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 ERVH48-1M5A8F1 160 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 FMO6PO60774 539 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 GNRH1P01148 92 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 IFNGP01579 166 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 MAS1P04201 325 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 CTSEP14091 401 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 HK1P19367 917 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 AHCYP23526 432 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 F8A1P23610 371 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 FPR3P25089 353 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 BLVRAP53004 296 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 RAB14P61106 215 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 POU6F2P78424 691 aaPredicted RBP10.99□□□□□ -0.65
XRCC3-208ENST00000554811 ZNHIT3Q15649 155 aaPredicted RBP10.99□□□□□ -0.65
XRCC3-208ENST00000554811 ZNF776Q68DI1 518 aaPredicted RBP10.99□□□□□ -0.65
XRCC3-208ENST00000554811 TMEM64Q6YI46 380 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 SSX6Q7RTT6 188 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 ZNF511Q8NB15 262 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 DNAAF1Q8NEP3 725 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 OR52R1Q8NGF1 315 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 OR2L8Q8NGY9 312 aa10.99□□□□□ -0.65
XRCC3-208ENST00000554811 OR8S1Q8NH09 359 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms