RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 LINC01620Q4KN68 170 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 C14orf28Q4W4Y0 310 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 ERICH5Q6P6B1 374 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 KCNIP4Q6PIL6 250 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 VTCN1Q7Z7D3 282 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 GPBP1Q86WP2 473 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 FAM9CQ8IZT9 166 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 SYCE1Q8N0S2 351 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 SLC22A18ASQ8N1D0 253 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 CD177Q8N6Q3 437 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 OR5AU1Q8NGC0 362 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 TBCKQ8TEA7 893 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 MITD1Q8WV92 249 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 SLC25A36Q96CQ1 311 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 CAPNS2Q96L46 248 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 PRRC1Q96M27 445 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 TGM7Q96PF1 710 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 PANX2Q96RD6 677 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 NLNQ9BYT8 704 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 ZBP1Q9H171 429 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 POLR3FQ9H1D9 316 aaPredicted RBP3.84□□□□□ -1.79
SCFD1-211ENST00000554437 RGCCQ9H4X1 137 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 DCTPP1Q9H773 170 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 AMBNQ9NP70 447 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 SMOXQ9NWM0 555 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 ABCD2Q9UBJ2 740 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 AFF2P51816 1311 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 POGZQ7Z3K3 1410 aa3.84□□□□□ -1.79
SCFD1-211ENST00000554437 TRAV25A0A0B4J276 109 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 A0A1B0GVL5 298 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 ZNF701M0R085 212 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-211ENST00000554437 LSM1O15116 133 aaKnown RBP3.83□□□□□ -1.8
SCFD1-211ENST00000554437 CHMP2AO43633 222 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 FGFR1OPO95684 399 aaKnown RBP3.83□□□□□ -1.8
SCFD1-211ENST00000554437 TSPAN12O95859 305 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 PGK1P00558 417 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 GSTT2P0CG29 244 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 GSTT2BP0CG30 244 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 LAP3P28838 519 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 RPS5P46782 204 aaKnown RBP3.83□□□□□ -1.8
SCFD1-211ENST00000554437 TPMTP51580 245 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 SLC7A2P52569 658 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 MAP3K7CLP57077 242 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 RPS4XP62701 263 aaKnown RBP3.83□□□□□ -1.8
SCFD1-211ENST00000554437 KLF5Q13887 457 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-211ENST00000554437 MESDQ14696 234 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 GANABQ14697 944 aaKnown RBP3.83□□□□□ -1.8
SCFD1-211ENST00000554437 PARP6Q2NL67 630 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 TIMM50Q3ZCQ8 353 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 ACSF3Q4G176 576 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-211ENST00000554437 LINC00242Q5T6M2 205 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 PLCXD3Q63HM9 321 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 RHBDD2Q6NTF9 364 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 RNASEKQ6P5S7 137 aaKnown RBP3.83□□□□□ -1.8
SCFD1-211ENST00000554437 ASRGL1Q7L266 308 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 NLRP9Q7RTR0 991 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 P4HA3Q7Z4N8 544 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 ZNF584Q8IVC4 421 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 ZBED8Q8IZ13 594 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 OR4C5Q8NGB2 326 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 RDH11Q8TC12 318 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 OR1E3Q8WZA6 343 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 SGK3Q96BR1 496 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 RAB3CQ96E17 227 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 ZBED6CLQ96FA7 236 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-211ENST00000554437 SH3YL1Q96HL8 342 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-211ENST00000554437 ACCSQ96QU6 501 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 SPATA16Q9BXB7 569 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 MCCC2Q9HCC0 563 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 POLD4Q9HCU8 107 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 ZNF639Q9UID6 485 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 ADAM28Q9UKQ2 775 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 ZNF175Q9Y473 711 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 KLF2Q9Y5W3 355 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-211ENST00000554437 ATP10DQ9P241 1426 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 RALGAPA1Q6GYQ0 2036 aa3.83□□□□□ -1.8
SCFD1-211ENST00000554437 TTC26A0AVF1 554 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 LRRC30A6NM36 301 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 GABRR3A8MPY1 467 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 PSMD11O00231 422 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 BTN3A3O00478 584 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 SH2D1BO14796 132 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 FTH1P02794 183 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 CRYGBP07316 175 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 STAG3L2P0CL84 134 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 SRMP19623 302 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 CYP2B6P20813 491 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 PTNP21246 168 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 CSNK1EP49674 416 aaKnown RBP3.82□□□□□ -1.8
SCFD1-211ENST00000554437 RAB9AP51151 201 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 BCAP31P51572 246 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 MFAP2P55001 183 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 BDH1Q02338 343 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 SRYQ05066 204 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 LTB4RQ15722 352 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 CHRNA6Q15825 494 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 CDKN3Q16667 212 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 FAM83EQ2M2I3 478 aa3.82□□□□□ -1.8
SCFD1-211ENST00000554437 HNRNPA1L2Q32P51 320 aaKnown RBP3.82□□□□□ -1.8
SCFD1-211ENST00000554437 ALKBH6Q3KRA9 238 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms