RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 MIPOL1Q8TD10 442 aa16.66■□□□□ 0.26
CPSF2-203ENST00000554290 AENQ8WTP8 325 aaKnown RBP16.66■□□□□ 0.26
CPSF2-203ENST00000554290 PSD2Q9BQI7 771 aa16.66■□□□□ 0.26
CPSF2-203ENST00000554290 TMEM109Q9BVC6 243 aa16.66■□□□□ 0.26
CPSF2-203ENST00000554290 POTEKPQ9BYX7 375 aa16.66■□□□□ 0.26
CPSF2-203ENST00000554290 DPY30Q9C005 99 aa16.66■□□□□ 0.26
CPSF2-203ENST00000554290 SERHL2Q9H4I8 314 aa16.66■□□□□ 0.26
CPSF2-203ENST00000554290 NSD1Q96L73 2696 aaPredicted RBP16.65■□□□□ 0.26
CPSF2-203ENST00000554290 CYTIPO60759 359 aa16.65■□□□□ 0.26
CPSF2-203ENST00000554290 DNAJA2O60884 412 aa16.65■□□□□ 0.26
CPSF2-203ENST00000554290 SNUPNO95149 360 aaKnown RBP16.65■□□□□ 0.26
CPSF2-203ENST00000554290 SERPINE1P05121 402 aa16.65■□□□□ 0.26
CPSF2-203ENST00000554290 FESP07332 822 aa16.65■□□□□ 0.26
CPSF2-203ENST00000554290 OR3A2P47893 321 aa16.65■□□□□ 0.26
CPSF2-203ENST00000554290 SESN3P58005 492 aa16.65■□□□□ 0.26
CPSF2-203ENST00000554290 ANXA8L1Q5VT79 327 aa16.65■□□□□ 0.26
CPSF2-203ENST00000554290 BHLHA15Q7RTS1 189 aaPredicted RBP16.65■□□□□ 0.26
CPSF2-203ENST00000554290 CLEC4FQ8N1N0 589 aa16.65■□□□□ 0.26
CPSF2-203ENST00000554290 ZNF619Q8N2I2 560 aa16.65■□□□□ 0.26
CPSF2-203ENST00000554290 OIT3Q8WWZ8 545 aa16.65■□□□□ 0.26
CPSF2-203ENST00000554290 FBXW5Q969U6 566 aa16.65■□□□□ 0.26
CPSF2-203ENST00000554290 ZNF524Q96C55 264 aa16.65■□□□□ 0.26
CPSF2-203ENST00000554290 TRMT61AQ96FX7 289 aaKnown RBP16.65■□□□□ 0.26
CPSF2-203ENST00000554290 PPP1R36Q96LQ0 422 aa16.65■□□□□ 0.26
CPSF2-203ENST00000554290 ZNF350Q9GZX5 532 aa16.65■□□□□ 0.26
CPSF2-203ENST00000554290 QRSL1Q9H0R6 528 aaKnown RBP16.65■□□□□ 0.26
CPSF2-203ENST00000554290 OR51I1Q9H343 314 aa16.65■□□□□ 0.26
CPSF2-203ENST00000554290 AKTIPQ9H8T0 292 aa16.65■□□□□ 0.26
CPSF2-203ENST00000554290 POLE3Q9NRF9 147 aa16.65■□□□□ 0.26
CPSF2-203ENST00000554290 KCNE5Q9UJ90 142 aa16.65■□□□□ 0.26
CPSF2-203ENST00000554290 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.65■□□□□ 0.26
CPSF2-203ENST00000554290 PRSS51A0A1B0GVH4 220 aa16.64■□□□□ 0.25
CPSF2-203ENST00000554290 WDR91A4D1P6 747 aa16.64■□□□□ 0.25
CPSF2-203ENST00000554290 ZNF724A8MTY0 619 aa16.64■□□□□ 0.25
CPSF2-203ENST00000554290 ZNF814B7Z6K7 855 aa16.64■□□□□ 0.25
CPSF2-203ENST00000554290 SMAD9O15198 467 aaKnown RBP16.64■□□□□ 0.25
CPSF2-203ENST00000554290 BIRC5O15392 142 aa16.64■□□□□ 0.25
CPSF2-203ENST00000554290 ITM2AO43736 263 aa16.64■□□□□ 0.25
CPSF2-203ENST00000554290 UGT2B17O75795 530 aa16.64■□□□□ 0.25
CPSF2-203ENST00000554290 UBTFL6P0CB48 400 aaPredicted RBP16.64■□□□□ 0.25
CPSF2-203ENST00000554290 UQCRC2P22695 453 aa16.64■□□□□ 0.25
CPSF2-203ENST00000554290 ABCE1P61221 599 aaKnown RBP16.64■□□□□ 0.25
CPSF2-203ENST00000554290 CSNK2A1P68400 391 aaPredicted RBP16.64■□□□□ 0.25
CPSF2-203ENST00000554290 PPP2R2BQ00005 443 aa16.64■□□□□ 0.25
CPSF2-203ENST00000554290 MERTKQ12866 999 aa16.64■□□□□ 0.25
CPSF2-203ENST00000554290 CHI3L2Q15782 390 aa16.64■□□□□ 0.25
CPSF2-203ENST00000554290 KRT71Q3SY84 523 aa16.64■□□□□ 0.25
CPSF2-203ENST00000554290 HEPHL1Q6MZM0 1159 aa16.64■□□□□ 0.25
CPSF2-203ENST00000554290 ZNF100Q8IYN0 542 aa16.64■□□□□ 0.25
CPSF2-203ENST00000554290 KIRREL3Q8IZU9 778 aa16.64■□□□□ 0.25
CPSF2-203ENST00000554290 ZNF781Q8N8C0 355 aa16.64■□□□□ 0.25
CPSF2-203ENST00000554290 PIWIL2Q8TC59 973 aaKnown RBP16.64■□□□□ 0.25
CPSF2-203ENST00000554290 SLC25A43Q8WUT9 341 aaPredicted RBP16.64■□□□□ 0.25
CPSF2-203ENST00000554290 XAGE5Q8WWM1 108 aa16.64■□□□□ 0.25
CPSF2-203ENST00000554290 PKNOX2Q96KN3 472 aa16.64■□□□□ 0.25
CPSF2-203ENST00000554290 ACER3Q9NUN7 267 aa16.64■□□□□ 0.25
CPSF2-203ENST00000554290 RAP2CQ9Y3L5 183 aa16.64■□□□□ 0.25
CPSF2-203ENST00000554290 SPIN1Q9Y657 262 aaPredicted RBP16.64■□□□□ 0.25
CPSF2-203ENST00000554290 C9JVG2 144 aa16.63■□□□□ 0.25
CPSF2-203ENST00000554290 SULT2B1O00204 365 aa16.63■□□□□ 0.25
CPSF2-203ENST00000554290 H6PDO95479 791 aa16.63■□□□□ 0.25
CPSF2-203ENST00000554290 GUSBP08236 651 aa16.63■□□□□ 0.25
CPSF2-203ENST00000554290 OR12D1P0DN82 309 aa16.63■□□□□ 0.25
CPSF2-203ENST00000554290 PCSK6P29122 969 aa16.63■□□□□ 0.25
CPSF2-203ENST00000554290 DIO1P49895 249 aa16.63■□□□□ 0.25
CPSF2-203ENST00000554290 RPL14P50914 215 aaKnown RBP16.63■□□□□ 0.25
CPSF2-203ENST00000554290 ETFDHQ16134 617 aa16.63■□□□□ 0.25
CPSF2-203ENST00000554290 WDR93Q6P2C0 686 aa16.63■□□□□ 0.25
CPSF2-203ENST00000554290 TMPPEQ6ZT21 453 aa16.63■□□□□ 0.25
CPSF2-203ENST00000554290 SSX8Q7RTT4 187 aa16.63■□□□□ 0.25
CPSF2-203ENST00000554290 GALNT5Q7Z7M9 940 aa16.63■□□□□ 0.25
CPSF2-203ENST00000554290 LILRB1Q8NHL6 650 aaPredicted RBP16.63■□□□□ 0.25
CPSF2-203ENST00000554290 SMAP2Q8WU79 429 aaPredicted RBP16.63■□□□□ 0.25
CPSF2-203ENST00000554290 TESCQ96BS2 214 aa16.63■□□□□ 0.25
CPSF2-203ENST00000554290 ZNF775Q96BV0 537 aaPredicted RBP16.63■□□□□ 0.25
CPSF2-203ENST00000554290 MUCL1Q96DR8 90 aa16.63■□□□□ 0.25
CPSF2-203ENST00000554290 EMC3Q9P0I2 261 aa16.63■□□□□ 0.25
CPSF2-203ENST00000554290 ING1Q9UK53 422 aaPredicted RBP16.63■□□□□ 0.25
CPSF2-203ENST00000554290 SLC35A3Q9Y2D2 325 aa16.63■□□□□ 0.25
CPSF2-203ENST00000554290 WDR45Q9Y484 360 aa16.63■□□□□ 0.25
CPSF2-203ENST00000554290 VPS13CQ709C8 3753 aa16.63■□□□□ 0.25
CPSF2-203ENST00000554290 HEATR5AQ86XA9 2040 aa16.62■□□□□ 0.25
CPSF2-203ENST00000554290 CENPVL1A0A0U1RR11 272 aa16.62■□□□□ 0.25
CPSF2-203ENST00000554290 ANKRD28O15084 1053 aa16.62■□□□□ 0.25
CPSF2-203ENST00000554290 RGS16O15492 202 aaPredicted RBP16.62■□□□□ 0.25
CPSF2-203ENST00000554290 KIAA0513O60268 411 aa16.62■□□□□ 0.25
CPSF2-203ENST00000554290 LYZL6O75951 148 aa16.62■□□□□ 0.25
CPSF2-203ENST00000554290 CPSF4O95639 269 aaKnown RBP16.62■□□□□ 0.25
CPSF2-203ENST00000554290 TFPIP10646 304 aa16.62■□□□□ 0.25
CPSF2-203ENST00000554290 FKBP2P26885 142 aaKnown RBP16.62■□□□□ 0.25
CPSF2-203ENST00000554290 APOBEC1P41238 236 aaKnown RBP16.62■□□□□ 0.25
CPSF2-203ENST00000554290 CASP9P55211 416 aa16.62■□□□□ 0.25
CPSF2-203ENST00000554290 DPY19L1Q2PZI1 675 aa16.62■□□□□ 0.25
CPSF2-203ENST00000554290 ZNF672Q499Z4 452 aaPredicted RBP16.62■□□□□ 0.25
CPSF2-203ENST00000554290 SYT14P1Q58G82 188 aa16.62■□□□□ 0.25
CPSF2-203ENST00000554290 DNAJC14Q6Y2X3 702 aaPredicted RBP16.62■□□□□ 0.25
CPSF2-203ENST00000554290 OLIG3Q7RTU3 272 aa16.62■□□□□ 0.25
CPSF2-203ENST00000554290 MTDHQ86UE4 582 aaKnown RBP16.62■□□□□ 0.25
CPSF2-203ENST00000554290 ANKRD46Q86W74 232 aa16.62■□□□□ 0.25
CPSF2-203ENST00000554290 ZNF563Q8TA94 476 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms