RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 NCKAP1Q9Y2A7 1128 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 SLC9A8Q9Y2E8 581 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 RBMX2Q9Y388 322 aaKnown RBP5.5□□□□□ -1.53
VPS33B-203ENST00000554264 SLCO1B1Q9Y6L6 691 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 PRSS21Q9Y6M0 314 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 MAST4O15021 2626 aa5.5□□□□□ -1.53
VPS33B-203ENST00000554264 COL5A1P20908 1838 aaPredicted RBP5.5□□□□□ -1.53
VPS33B-203ENST00000554264 GOLGA4Q13439 2230 aaKnown RBP5.5□□□□□ -1.53
VPS33B-203ENST00000554264 MUC22E2RYF6 1773 aaPredicted RBP5.5□□□□□ -1.53
VPS33B-203ENST00000554264 MYOFQ9NZM1 2061 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 TSPAN11A1L157 253 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 ANKRD61A6NGH8 418 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 ALG1L2C9J202 215 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 CTDSP2O14595 271 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 SLC28A2O43868 658 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 NOS1APO75052 506 aaPredicted RBP5.49□□□□□ -1.53
VPS33B-203ENST00000554264 CSO75390 466 aaKnown RBP5.49□□□□□ -1.53
VPS33B-203ENST00000554264 DIRAS1O95057 198 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 CRYZL1O95825 349 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 DHFRP00374 187 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 KLKB1P03952 638 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 ALPIP09923 528 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 ACP2P11117 423 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 SLC2A2P11168 524 aaPredicted RBP5.49□□□□□ -1.53
VPS33B-203ENST00000554264 ITGB6P18564 788 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 GRK5P34947 590 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 TALDO1P37837 337 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 CSKP41240 450 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 SPINT3P49223 89 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 STK19P49842 368 aaPredicted RBP5.49□□□□□ -1.53
VPS33B-203ENST00000554264 MVDP53602 400 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 CRYBA2P53672 197 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 RAG2P55895 527 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 CLDN6P56747 220 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 CLDN20P56880 219 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 E2F1Q01094 437 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 MEF2AQ02078 507 aaPredicted RBP5.49□□□□□ -1.53
VPS33B-203ENST00000554264 ZNF91Q05481 1191 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 DUSP2Q05923 314 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 DMPKQ09013 629 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 HSPA14Q0VDF9 509 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 MRPL49Q13405 166 aaKnown RBP5.49□□□□□ -1.53
VPS33B-203ENST00000554264 GAB1Q13480 694 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 ELAVL1Q15717 326 aaKnown RBP5.49□□□□□ -1.53
VPS33B-203ENST00000554264 ZNF79Q15937 498 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 ZNF284Q2VY69 593 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 MINDY4Q4G0A6 757 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 PYDC2Q56P42 97 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 ZNF628Q5EBL2 1059 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 KIAA0895LQ68EN5 471 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 FAM71E1Q6IPT2 247 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 CRTC1Q6UUV9 634 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 ANGPTL8Q6UXH0 198 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 ZNF730Q6ZMV8 503 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 IDO2Q6ZQW0 420 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 Q6ZRM9 215 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 QSOX2Q6ZRP7 698 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 MRGPREQ86SM8 312 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 ASPGQ86U10 573 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 GATAD2AQ86YP4 633 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 CLECL1Q8IZS7 167 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 GHDCQ8N2G8 530 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 EID2Q8N6I1 236 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 GPR26Q8NDV2 337 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 OR7G3Q8NG95 312 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 NFKBIDQ8NI38 313 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 BBS10Q8TAM1 723 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 WFIKKN2Q8TEU8 576 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 ELMO1Q92556 727 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 AKAP1Q92667 903 aaKnown RBP eCLIP5.49□□□□□ -1.53
VPS33B-203ENST00000554264 HOXB13Q92826 284 aaPredicted RBP5.49□□□□□ -1.53
VPS33B-203ENST00000554264 MTFMTQ96DP5 389 aaKnown RBP5.49□□□□□ -1.53
VPS33B-203ENST00000554264 MYEOVQ96EZ4 313 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 DIRAS2Q96HU8 199 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 EGLN2Q96KS0 407 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 ZNF354BQ96LW1 612 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 DHRS9Q9BPW9 319 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 KCNS3Q9BQ31 491 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 RHNO1Q9BSD3 238 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 MARVELD1Q9BSK0 173 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 CNPPD1Q9BV87 410 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 TSSK6Q9BXA6 273 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 EBPLQ9BY08 206 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 ACTR6Q9GZN1 396 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 PCBD2Q9H0N5 130 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 POLR2J3Q9H1A7 115 aaKnown RBP5.49□□□□□ -1.53
VPS33B-203ENST00000554264 PIGUQ9H490 435 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 RANBP3Q9H6Z4 567 aaPredicted RBP5.49□□□□□ -1.53
VPS33B-203ENST00000554264 EVA1AQ9H8M9 152 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 MIEF1Q9NQG6 463 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 ACSS1Q9NUB1 689 aaPredicted RBP5.49□□□□□ -1.53
VPS33B-203ENST00000554264 TXNL4BQ9NX01 149 aaKnown RBP5.49□□□□□ -1.53
VPS33B-203ENST00000554264 STOX2Q9P2F5 926 aaPredicted RBP5.49□□□□□ -1.53
VPS33B-203ENST00000554264 SCML1Q9UN30 329 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 CLCA2Q9UQC9 943 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 SNX8Q9Y5X2 465 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 ZNF462Q96JM2 2506 aa5.49□□□□□ -1.53
VPS33B-203ENST00000554264 C17orf113A0A1B0GUU1 675 aa5.48□□□□□ -1.53
VPS33B-203ENST00000554264 A0A1B0GVI7 797 aa5.48□□□□□ -1.53
VPS33B-203ENST00000554264 FAM240BA0A1B0GVZ2 78 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms