RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 LINC00471Q8N535 108 aa13.2□□□□□ -0.3
SHMT2-208ENST00000553868 OR4D11Q8NGI4 311 aa13.2□□□□□ -0.3
SHMT2-208ENST00000553868 FAR1Q8WVX9 515 aa13.2□□□□□ -0.3
SHMT2-208ENST00000553868 RELTQ969Z4 430 aa13.2□□□□□ -0.3
SHMT2-208ENST00000553868 DHRS1Q96LJ7 313 aa13.2□□□□□ -0.3
SHMT2-208ENST00000553868 ZNF184Q99676 751 aaPredicted RBP13.2□□□□□ -0.3
SHMT2-208ENST00000553868 RBM4BQ9BQ04 359 aaKnown RBP13.2□□□□□ -0.3
SHMT2-208ENST00000553868 ZNF559Q9BR84 538 aa13.2□□□□□ -0.3
SHMT2-208ENST00000553868 RBM4Q9BWF3 364 aaKnown RBP13.2□□□□□ -0.3
SHMT2-208ENST00000553868 RSPO3Q9BXY4 272 aaPredicted RBP13.2□□□□□ -0.3
SHMT2-208ENST00000553868 ANKRD19PQ9H560 264 aa13.2□□□□□ -0.3
SHMT2-208ENST00000553868 ZNF552Q9H707 407 aaPredicted RBP13.2□□□□□ -0.3
SHMT2-208ENST00000553868 LIN28AQ9H9Z2 209 aaKnown RBP13.2□□□□□ -0.3
SHMT2-208ENST00000553868 EXOSC3Q9NQT5 275 aaKnown RBP13.2□□□□□ -0.3
SHMT2-208ENST00000553868 RLIMQ9NVW2 624 aa13.2□□□□□ -0.3
SHMT2-208ENST00000553868 CHST2Q9Y4C5 530 aa13.2□□□□□ -0.3
SHMT2-208ENST00000553868 ORC6Q9Y5N6 252 aa13.2□□□□□ -0.3
SHMT2-208ENST00000553868 LYVE1Q9Y5Y7 322 aa13.2□□□□□ -0.3
SHMT2-208ENST00000553868 U3KQV3 271 aa13.2□□□□□ -0.3
SHMT2-208ENST00000553868 JMJD1CQ15652 2540 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 A0A1W2PRQ8 180 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 CLDN24A6NM45 220 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 ALG1L2C9J202 215 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 TP53I11O14683 189 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 EIF4E2O60573 245 aaKnown RBP13.19□□□□□ -0.3
SHMT2-208ENST00000553868 UGT2B11O75310 529 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 SLC6A8P48029 635 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 SSR4P51571 173 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 RRADP55042 308 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 AIMP2Q13155 320 aaKnown RBP13.19□□□□□ -0.3
SHMT2-208ENST00000553868 DAG1Q14118 895 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 DGCR6Q14129 220 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 TRAM2Q15035 370 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 FGD3Q5JSP0 725 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 OTUD3Q5T2D3 398 aaPredicted RBP13.19□□□□□ -0.3
SHMT2-208ENST00000553868 COMTD1Q86VU5 262 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 RBM45Q8IUH3 476 aaKnown RBP13.19□□□□□ -0.3
SHMT2-208ENST00000553868 GALNT4Q8N4A0 578 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 ZADH2Q8N4Q0 377 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 PHOSPHO1Q8TCT1 267 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 GIPC3Q8TF64 312 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 ASB15Q8WXK1 588 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 DNAJC9Q8WXX5 260 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 CNOT9Q92600 299 aaKnown RBP13.19□□□□□ -0.3
SHMT2-208ENST00000553868 RDH12Q96NR8 316 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 RASL10BQ96S79 203 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 TRIM2Q9C040 744 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 GABARAPL1Q9H0R8 117 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 Q9H521 79 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 NMNAT1Q9HAN9 279 aaPredicted RBP13.19□□□□□ -0.3
SHMT2-208ENST00000553868 TMEM27Q9HBJ8 222 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 ATP13A2Q9NQ11 1180 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 DNAJB12Q9NXW2 375 aaKnown RBP13.19□□□□□ -0.3
SHMT2-208ENST00000553868 USE1Q9NZ43 259 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 KIF17Q9P2E2 1029 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 TEKT2Q9UIF3 430 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 A4GNTQ9UNA3 340 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 CNTRLQ7Z7A1 2325 aa13.19□□□□□ -0.3
SHMT2-208ENST00000553868 TRAPPC13A5PLN9 417 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 ARRDC5A6NEK1 342 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 J3KTA2 159 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 PDLIM1O00151 329 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 FAAHO00519 579 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 SOCS2O14508 198 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 EI24O14681 340 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 ZNF264O43296 627 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 FRS3O43559 492 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 NDUFB5O43674 189 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 ITGA10O75578 1167 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 CYP7B1O75881 506 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 CCNB2O95067 398 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 UBTFL6P0CB48 400 aaPredicted RBP13.18□□□□□ -0.3
SHMT2-208ENST00000553868 ITGAMP11215 1152 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 ZNF26P17031 533 aaPredicted RBP13.18□□□□□ -0.3
SHMT2-208ENST00000553868 CDH2P19022 906 aaPredicted RBP13.18□□□□□ -0.3
SHMT2-208ENST00000553868 EVI2BP34910 448 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 ALDH3A2P51648 485 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 ZNF136P52737 540 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 IST1P53990 364 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 MLF1P58340 268 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 COPZ1P61923 177 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 EPS8Q12929 822 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 GANABQ14697 944 aaKnown RBP13.18□□□□□ -0.3
SHMT2-208ENST00000553868 CDSNQ15517 529 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 NPTX1Q15818 432 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 NTRK2Q16620 822 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 RFX4Q33E94 735 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 ENTPD8Q5MY95 495 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 DCST1Q5T197 706 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 FNDC7Q5VTL7 733 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 H3F3CQ6NXT2 135 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 ZNF613Q6PF04 617 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 C16orf47Q6ZP98 133 aaPredicted RBP13.18□□□□□ -0.3
SHMT2-208ENST00000553868 GPALPP1Q8IXQ4 340 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 ZNF808Q8N4W9 903 aaPredicted RBP13.18□□□□□ -0.3
SHMT2-208ENST00000553868 POGLUT1Q8NBL1 392 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 CLEC1AQ8NC01 280 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 FAM71CQ8NEG0 241 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 OR4C15Q8NGM1 316 aa13.18□□□□□ -0.3
SHMT2-208ENST00000553868 HGDQ93099 445 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms