RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 MERTKQ12866 999 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 CBFBQ13951 182 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 PDCD4Q53EL6 469 aaKnown RBP16.23■□□□□ 0.19
SHMT2-206ENST00000553529 SLC25A53Q5H9E4 307 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 ATG16L1Q676U5 607 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 SLC2A7Q6PXP3 512 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 PLEKHM3Q6ZWE6 761 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 KRTAP1-3Q8IUG1 177 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 C10orf111Q8N326 155 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 TOR1AIP2Q8NFQ8 470 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 OR6K3Q8NGY3 331 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 MRGPRX4Q96LA9 322 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 OR5B2Q96R09 309 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 SAP130Q9H0E3 1048 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 PLSCR4Q9NRQ2 329 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 EXD2Q9NVH0 621 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 RLIMQ9NVW2 624 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 EMC9Q9Y3B6 208 aa16.23■□□□□ 0.19
SHMT2-206ENST00000553529 DUXAA6NLW8 204 aa16.22■□□□□ 0.19
SHMT2-206ENST00000553529 C16orf97H3BN30 126 aa16.22■□□□□ 0.19
SHMT2-206ENST00000553529 EIF4E2O60573 245 aaKnown RBP16.22■□□□□ 0.19
SHMT2-206ENST00000553529 DNAJA2O60884 412 aa16.22■□□□□ 0.19
SHMT2-206ENST00000553529 SLC22A3O75751 556 aa16.22■□□□□ 0.19
SHMT2-206ENST00000553529 EIF1P41567 113 aaKnown RBP16.22■□□□□ 0.19
SHMT2-206ENST00000553529 AGBL2Q5U5Z8 902 aa16.22■□□□□ 0.19
SHMT2-206ENST00000553529 TFAP2EQ6VUC0 442 aa16.22■□□□□ 0.19
SHMT2-206ENST00000553529 FCRLAQ7L513 359 aa16.22■□□□□ 0.19
SHMT2-206ENST00000553529 CXorf67Q86X51 503 aaPredicted RBP16.22■□□□□ 0.19
SHMT2-206ENST00000553529 VRK2Q86Y07 508 aa16.22■□□□□ 0.19
SHMT2-206ENST00000553529 LRRC34Q8IZ02 419 aa16.22■□□□□ 0.19
SHMT2-206ENST00000553529 PIWIL2Q8TC59 973 aaKnown RBP16.22■□□□□ 0.19
SHMT2-206ENST00000553529 ARL5BQ96KC2 179 aa16.22■□□□□ 0.19
SHMT2-206ENST00000553529 RSPO3Q9BXY4 272 aaPredicted RBP16.22■□□□□ 0.19
SHMT2-206ENST00000553529 CXXC4Q9H2H0 198 aa16.22■□□□□ 0.19
SHMT2-206ENST00000553529 PRSS50Q9UI38 385 aa16.22■□□□□ 0.19
SHMT2-206ENST00000553529 ETV2O00321 342 aaPredicted RBP16.21■□□□□ 0.19
SHMT2-206ENST00000553529 AK1P00568 194 aa16.21■□□□□ 0.19
SHMT2-206ENST00000553529 RAF1P04049 648 aa16.21■□□□□ 0.19
SHMT2-206ENST00000553529 CD53P19397 219 aa16.21■□□□□ 0.19
SHMT2-206ENST00000553529 CRYGSP22914 178 aa16.21■□□□□ 0.19
SHMT2-206ENST00000553529 DNASE1P24855 282 aa16.21■□□□□ 0.19
SHMT2-206ENST00000553529 SELENBP1Q13228 472 aa16.21■□□□□ 0.19
SHMT2-206ENST00000553529 DPY19L1Q2PZI1 675 aa16.21■□□□□ 0.19
SHMT2-206ENST00000553529 ATAD3BQ5T9A4 648 aa16.21■□□□□ 0.19
SHMT2-206ENST00000553529 EPGNQ6UW88 154 aa16.21■□□□□ 0.19
SHMT2-206ENST00000553529 EIF3MQ7L2H7 374 aaKnown RBP16.21■□□□□ 0.19
SHMT2-206ENST00000553529 WFDC11Q8NEX6 87 aa16.21■□□□□ 0.19
SHMT2-206ENST00000553529 VPS37AQ8NEZ2 397 aa16.21■□□□□ 0.19
SHMT2-206ENST00000553529 FOXC2Q99958 501 aa16.21■□□□□ 0.19
SHMT2-206ENST00000553529 CCDC106Q9BWC9 280 aa16.21■□□□□ 0.19
SHMT2-206ENST00000553529 SDR39U1Q9NRG7 319 aaPredicted RBP16.21■□□□□ 0.19
SHMT2-206ENST00000553529 ELOVL5Q9NYP7 299 aa16.21■□□□□ 0.19
SHMT2-206ENST00000553529 SLAMF8Q9P0V8 285 aa16.21■□□□□ 0.19
SHMT2-206ENST00000553529 KLHL13Q9P2N7 655 aa16.21■□□□□ 0.19
SHMT2-206ENST00000553529 NDRG3Q9UGV2 375 aa16.21■□□□□ 0.19
SHMT2-206ENST00000553529 FREM1Q5H8C1 2179 aa16.21■□□□□ 0.19
SHMT2-206ENST00000553529 VPS13CQ709C8 3753 aa16.21■□□□□ 0.19
SHMT2-206ENST00000553529 RAI1Q7Z5J4 1906 aaPredicted RBP16.21■□□□□ 0.19
SHMT2-206ENST00000553529 ABCA4P78363 2273 aa16.2■□□□□ 0.18
SHMT2-206ENST00000553529 UQCRHLA0A096LP55 91 aa16.2■□□□□ 0.18
SHMT2-206ENST00000553529 RFXANKO14593 260 aa16.2■□□□□ 0.18
SHMT2-206ENST00000553529 CASKO14936 926 aa16.2■□□□□ 0.18
SHMT2-206ENST00000553529 GCM2O75603 506 aaPredicted RBP16.2■□□□□ 0.18
SHMT2-206ENST00000553529 FESP07332 822 aa16.2■□□□□ 0.18
SHMT2-206ENST00000553529 GKN3PP0CG01 181 aa16.2■□□□□ 0.18
SHMT2-206ENST00000553529 ADH6P28332 368 aa16.2■□□□□ 0.18
SHMT2-206ENST00000553529 NTF4P34130 210 aa16.2■□□□□ 0.18
SHMT2-206ENST00000553529 IDH2P48735 452 aaKnown RBP16.2■□□□□ 0.18
SHMT2-206ENST00000553529 KCNJ10P78508 379 aa16.2■□□□□ 0.18
SHMT2-206ENST00000553529 FOXD4Q12950 439 aaPredicted RBP16.2■□□□□ 0.18
SHMT2-206ENST00000553529 KEAP1Q14145 624 aa16.2■□□□□ 0.18
SHMT2-206ENST00000553529 ZNF836Q6ZNA1 936 aa16.2■□□□□ 0.18
SHMT2-206ENST00000553529 WFDC8Q8IUA0 241 aa16.2■□□□□ 0.18
SHMT2-206ENST00000553529 RAB3IL1Q8TBN0 382 aa16.2■□□□□ 0.18
SHMT2-206ENST00000553529 NINJ1Q92982 152 aa16.2■□□□□ 0.18
SHMT2-206ENST00000553529 ATP6V1G3Q96LB4 118 aa16.2■□□□□ 0.18
SHMT2-206ENST00000553529 ZBTB18Q99592 522 aa16.2■□□□□ 0.18
SHMT2-206ENST00000553529 PSD2Q9BQI7 771 aa16.2■□□□□ 0.18
SHMT2-206ENST00000553529 SLC39A3Q9BRY0 314 aa16.2■□□□□ 0.18
SHMT2-206ENST00000553529 UBTD1Q9HAC8 227 aa16.2■□□□□ 0.18
SHMT2-206ENST00000553529 ACER3Q9NUN7 267 aa16.2■□□□□ 0.18
SHMT2-206ENST00000553529 CHST2Q9Y4C5 530 aa16.2■□□□□ 0.18
SHMT2-206ENST00000553529 TMEM72A0PK05 275 aa16.19■□□□□ 0.18
SHMT2-206ENST00000553529 ZC3H12DA2A288 527 aaKnown RBP16.19■□□□□ 0.18
SHMT2-206ENST00000553529 KLF11O14901 512 aa16.19■□□□□ 0.18
SHMT2-206ENST00000553529 UBDO15205 165 aa16.19■□□□□ 0.18
SHMT2-206ENST00000553529 KLF4O43474 513 aa16.19■□□□□ 0.18
SHMT2-206ENST00000553529 SASH3O75995 380 aa16.19■□□□□ 0.18
SHMT2-206ENST00000553529 BCHEP06276 602 aa16.19■□□□□ 0.18
SHMT2-206ENST00000553529 PRG2P13727 222 aa16.19■□□□□ 0.18
SHMT2-206ENST00000553529 IDO1P14902 403 aa16.19■□□□□ 0.18
SHMT2-206ENST00000553529 HOXB9P17482 250 aaPredicted RBP16.19■□□□□ 0.18
SHMT2-206ENST00000553529 RPS4Y1P22090 263 aaKnown RBP16.19■□□□□ 0.18
SHMT2-206ENST00000553529 SLC7A1P30825 629 aa16.19■□□□□ 0.18
SHMT2-206ENST00000553529 DIO1P49895 249 aa16.19■□□□□ 0.18
SHMT2-206ENST00000553529 IDH3AP50213 366 aa16.19■□□□□ 0.18
SHMT2-206ENST00000553529 POLR2JP52435 117 aaKnown RBP16.19■□□□□ 0.18
SHMT2-206ENST00000553529 EEF1A1P68104 462 aaKnown RBP16.19■□□□□ 0.18
SHMT2-206ENST00000553529 ADAM8P78325 824 aa16.19■□□□□ 0.18
SHMT2-206ENST00000553529 DEFB113Q30KQ7 82 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms