RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 FAM157BP0CG42 384 aa10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 POU3F2P20265 443 aaPredicted RBP10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 MAT2AP31153 395 aaKnown RBP10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 PCBP4P57723 403 aaKnown RBP10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 SIGLEC14Q08ET2 396 aa10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 SREBF2Q12772 1141 aa10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 ZC3H14Q6PJT7 736 aaKnown RBP10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 MBOAT2Q6ZWT7 520 aa10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 TPRA1Q86W33 373 aa10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 TCEAL8Q8IYN2 117 aa10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 ZDHHC1Q8WTX9 485 aa10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 CNRIP1Q96F85 164 aaPredicted RBP10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 SLC38A1Q9H2H9 487 aa10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 FBXL2Q9UKC9 423 aa10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 LIPT1Q9Y234 373 aa10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 A0A1W2PR48 441 aa10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 C7orf66A4D0T2 115 aa10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 MFSD13AQ14CX5 517 aa10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 STK11Q15831 433 aa10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 CST9Q5W186 159 aa10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 NIPAL3Q6P499 406 aa10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 CD300LDQ6UXZ3 194 aa10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 PDZD9Q8IXQ8 264 aa10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 OR52B4Q8NGK2 314 aa10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 OR2T4Q8NH00 348 aa10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 PCBD2Q9H0N5 130 aa10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 MCCC2Q9HCC0 563 aa10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 KLHL9Q9P2J3 617 aa10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 ACAD8Q9UKU7 415 aa10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 OR1A2Q9Y585 309 aa10.77□□□□□ -0.69
PPFIA2-227ENST00000552948 TBC1D3BA6NDS4 549 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 GREM1O60565 184 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 KLHL18O94889 574 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 NTHL1P78549 312 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 FOXK2Q01167 660 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 LRRN1Q6UXK5 716 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 TRILQ7L0X0 811 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 DGLUCYQ7Z3D6 616 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 ZNF454Q8N9F8 522 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 BPIFA2Q96DR5 249 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 DNAJA3Q96EY1 480 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 HMX1Q9NP08 348 aaPredicted RBP10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 TAS2R3Q9NYW6 316 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 IL20Q9NYY1 176 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 HIST1H1TP22492 207 aaPredicted RBP10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 CCR4P51679 360 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 ADIPOR2Q86V24 386 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 CMTM4Q8IZR5 234 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 HDDC3Q8N4P3 179 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 RELL2Q8NC24 303 aaPredicted RBP10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 OR2L2Q8NH16 312 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 DIO2Q92813 273 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 HSPA12BQ96MM6 686 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 SOSTQ9BQB4 213 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 ENKD1Q9H0I2 346 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 CCDC86Q9H6F5 360 aaKnown RBP10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 LOC100509620A0A075B734 347 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 ZNF879B4DU55 563 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 SBK2P0C263 348 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 HOXB3P14651 431 aaPredicted RBP10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 ACADLP28330 430 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 ERVFC1P60507 584 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 PON3Q15166 354 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 TMEM215Q68D42 235 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 ZNF793Q6ZN11 406 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 HSD17B8Q92506 261 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 FN3KQ9H479 309 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 C12orf10Q9HB07 376 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 SLCO1C1Q9NYB5 712 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 MLXQ9UH92 298 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 POMT2Q9UKY4 750 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 NLRC5Q86WI3 1866 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 GBF1Q92538 1859 aa10.76□□□□□ -0.69
PPFIA2-227ENST00000552948 TRAPPC13A5PLN9 417 aa10.75□□□□□ -0.69
PPFIA2-227ENST00000552948 GOSR2O14653 212 aa10.75□□□□□ -0.69
PPFIA2-227ENST00000552948 FBXO45P0C2W1 286 aa10.75□□□□□ -0.69
PPFIA2-227ENST00000552948 TPMTP51580 245 aa10.75□□□□□ -0.69
PPFIA2-227ENST00000552948 DECR1Q16698 335 aa10.75□□□□□ -0.69
PPFIA2-227ENST00000552948 DEFB134Q4QY38 66 aa10.75□□□□□ -0.69
PPFIA2-227ENST00000552948 SLC25A30Q5SVS4 291 aa10.75□□□□□ -0.69
PPFIA2-227ENST00000552948 HEPHL1Q6MZM0 1159 aa10.75□□□□□ -0.69
PPFIA2-227ENST00000552948 NHLRC1Q6VVB1 395 aa10.75□□□□□ -0.69
PPFIA2-227ENST00000552948 TMPRSS12Q86WS5 348 aa10.75□□□□□ -0.69
PPFIA2-227ENST00000552948 SUSD6Q92537 303 aa10.75□□□□□ -0.69
PPFIA2-227ENST00000552948 SGIP1Q9BQI5 828 aa10.75□□□□□ -0.69
PPFIA2-227ENST00000552948 ACTRT3Q9BYD9 372 aa10.75□□□□□ -0.69
PPFIA2-227ENST00000552948 DPEP2Q9H4A9 486 aa10.75□□□□□ -0.69
PPFIA2-227ENST00000552948 C6orf106Q9H6K1 298 aaPredicted RBP10.75□□□□□ -0.69
PPFIA2-227ENST00000552948 HRASLSQ9HDD0 168 aa10.75□□□□□ -0.69
PPFIA2-227ENST00000552948 NOX4Q9NPH5 578 aa10.75□□□□□ -0.69
PPFIA2-227ENST00000552948 C20orf141Q9NUB4 165 aa10.75□□□□□ -0.69
PPFIA2-227ENST00000552948 CAMK2AQ9UQM7 478 aa10.75□□□□□ -0.69
PPFIA2-227ENST00000552948 ANXA2P2A6NMY6 339 aa10.75□□□□□ -0.69
PPFIA2-227ENST00000552948 MAS1P04201 325 aa10.75□□□□□ -0.69
PPFIA2-227ENST00000552948 ANXA2P07355 339 aaKnown RBP10.75□□□□□ -0.69
PPFIA2-227ENST00000552948 AK4P27144 223 aaPredicted RBP10.75□□□□□ -0.69
PPFIA2-227ENST00000552948 CCR9P51686 369 aa10.75□□□□□ -0.69
PPFIA2-227ENST00000552948 GAS1P54826 345 aa10.75□□□□□ -0.69
PPFIA2-227ENST00000552948 CSNK1G2P78368 415 aa10.75□□□□□ -0.69
PPFIA2-227ENST00000552948 SLC7A9P82251 487 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms