RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 CHMP6Q96FZ7 201 aa6.77□□□□□ -1.33
NEK3-201ENST00000550331 MRGPRX4Q96LA9 322 aa6.77□□□□□ -1.33
NEK3-201ENST00000550331 PPP3R2Q96LZ3 170 aa6.77□□□□□ -1.33
NEK3-201ENST00000550331 KLHDC3Q9BQ90 382 aa6.77□□□□□ -1.33
NEK3-201ENST00000550331 RHOXF2Q9BQY4 288 aa6.77□□□□□ -1.33
NEK3-201ENST00000550331 GATA5Q9BWX5 397 aaPredicted RBP6.77□□□□□ -1.33
NEK3-201ENST00000550331 ACTRT3Q9BYD9 372 aa6.77□□□□□ -1.33
NEK3-201ENST00000550331 SRXN1Q9BYN0 137 aa6.77□□□□□ -1.33
NEK3-201ENST00000550331 POTEKPQ9BYX7 375 aa6.77□□□□□ -1.33
NEK3-201ENST00000550331 C12orf65Q9H3J6 166 aaKnown RBP6.77□□□□□ -1.33
NEK3-201ENST00000550331 COQ10BQ9H8M1 238 aa6.77□□□□□ -1.33
NEK3-201ENST00000550331 L2HGDHQ9H9P8 463 aa6.77□□□□□ -1.33
NEK3-201ENST00000550331 BCO1Q9HAY6 547 aa6.77□□□□□ -1.33
NEK3-201ENST00000550331 ATAD3AQ9NVI7 634 aa6.77□□□□□ -1.33
NEK3-201ENST00000550331 GPATCH2Q9NW75 528 aa6.77□□□□□ -1.33
NEK3-201ENST00000550331 MKS1Q9NXB0 559 aa6.77□□□□□ -1.33
NEK3-201ENST00000550331 KLHL9Q9P2J3 617 aa6.77□□□□□ -1.33
NEK3-201ENST00000550331 FAF1Q9UNN5 650 aaPredicted RBP6.77□□□□□ -1.33
NEK3-201ENST00000550331 LAMP3Q9UQV4 416 aa6.77□□□□□ -1.33
NEK3-201ENST00000550331 CARD8Q9Y2G2 431 aa6.77□□□□□ -1.33
NEK3-201ENST00000550331 FIS1Q9Y3D6 152 aa6.77□□□□□ -1.33
NEK3-201ENST00000550331 RAI1Q7Z5J4 1906 aaPredicted RBP6.77□□□□□ -1.33
NEK3-201ENST00000550331 CR1P17927 2039 aa6.77□□□□□ -1.33
NEK3-201ENST00000550331 MED12Q93074 2177 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 KRTAP9-7A8MTY7 169 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 NPIPB9F8W1W9 429 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 ETV2O00321 342 aaPredicted RBP6.76□□□□□ -1.33
NEK3-201ENST00000550331 ZNF195O14628 629 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 PIP5K1BO14986 540 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 EFNA2O43921 213 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 ADAP00813 363 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 FESP07332 822 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 CHRNGP07510 517 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 YES1P07947 543 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 DANCRP0C864 163 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 PRKCAP17252 672 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 OR3A2P47893 321 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 CCT3P49368 545 aaKnown RBP6.76□□□□□ -1.33
NEK3-201ENST00000550331 ATP12AP54707 1039 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 RAC3P60763 192 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 KRTAP1-1Q07627 177 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 DMTNQ08495 405 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 ITGADQ13349 1161 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 TNK1Q13470 666 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 TP53BP2Q13625 1128 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 CBFBQ13951 182 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 VEZF1Q14119 521 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 TAB1Q15750 504 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 CLEC12BQ2HXU8 276 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 LSM12Q3MHD2 195 aaKnown RBP6.76□□□□□ -1.33
NEK3-201ENST00000550331 UGT3A2Q3SY77 523 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 TMEM176BQ3YBM2 270 aaPredicted RBP6.76□□□□□ -1.33
NEK3-201ENST00000550331 ZNF672Q499Z4 452 aaPredicted RBP6.76□□□□□ -1.33
NEK3-201ENST00000550331 XKR7Q5GH72 579 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 SLC25A53Q5H9E4 307 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 DCST2Q5T1A1 773 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.76□□□□□ -1.33
NEK3-201ENST00000550331 HEPHL1Q6MZM0 1159 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 SEZ6L2Q6UXD5 910 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 Q6ZT83 130 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 NUFIP2Q7Z417 695 aaKnown RBP6.76□□□□□ -1.33
NEK3-201ENST00000550331 GSPT2Q8IYD1 628 aaKnown RBP6.76□□□□□ -1.33
NEK3-201ENST00000550331 C4orf33Q8N1A6 199 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 TOR1AIP2Q8NFQ8 470 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 OR7A2PQ8NGA2 310 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 OR5W2Q8NH69 310 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 LILRB1Q8NHL6 650 aaPredicted RBP6.76□□□□□ -1.33
NEK3-201ENST00000550331 FBXO27Q8NI29 283 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 SFXN5Q8TD22 340 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 GPR119Q8TDV5 335 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 EPS8L3Q8TE67 593 aaKnown RBP6.76□□□□□ -1.33
NEK3-201ENST00000550331 SMAP2Q8WU79 429 aaPredicted RBP6.76□□□□□ -1.33
NEK3-201ENST00000550331 UBLCP1Q8WVY7 318 aaPredicted RBP6.76□□□□□ -1.33
NEK3-201ENST00000550331 ARL8AQ96BM9 186 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 MOAP1Q96BY2 351 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 APOPT1Q96IL0 206 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 PRPF18Q99633 342 aaKnown RBP6.76□□□□□ -1.33
NEK3-201ENST00000550331 PSD2Q9BQI7 771 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 EML4Q9HC35 981 aaKnown RBP6.76□□□□□ -1.33
NEK3-201ENST00000550331 TRAF6Q9Y4K3 522 aa6.76□□□□□ -1.33
NEK3-201ENST00000550331 SMIM23A6NLE4 172 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 DUXAA6NLW8 204 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 TMEM233B4DJY2 109 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 ZNF814B7Z6K7 855 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 GTPBP1O00178 669 aaKnown RBP6.75□□□□□ -1.33
NEK3-201ENST00000550331 CLOCKO15516 846 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 ZNF264O43296 627 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 EIF4E2O60573 245 aaKnown RBP6.75□□□□□ -1.33
NEK3-201ENST00000550331 CYTIPO60759 359 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 DNAJA2O60884 412 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 WNT11O96014 354 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 AK1P00568 194 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 SOD3P08294 240 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 LAMP1P11279 417 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 UBL4AP11441 157 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 COX5AP20674 150 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 EFNA1P20827 205 aaPredicted RBP6.75□□□□□ -1.33
NEK3-201ENST00000550331 PRPS1L1P21108 318 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 ENPP1P22413 925 aa6.75□□□□□ -1.33
NEK3-201ENST00000550331 SLC7A1P30825 629 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms