RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 MIEF1Q9NQG6 463 aa8.18□□□□□ -1.1
SSH1-205ENST00000546812 ASIC5Q9NY37 505 aa8.18□□□□□ -1.1
SSH1-205ENST00000546812 NOP53Q9NZM5 478 aaKnown RBP8.18□□□□□ -1.1
SSH1-205ENST00000546812 BAIAP2L1Q9UHR4 511 aa8.18□□□□□ -1.1
SSH1-205ENST00000546812 DCTN4Q9UJW0 460 aa8.18□□□□□ -1.1
SSH1-205ENST00000546812 PSME2Q9UL46 239 aa8.18□□□□□ -1.1
SSH1-205ENST00000546812 ABCG2Q9UNQ0 655 aa8.18□□□□□ -1.1
SSH1-205ENST00000546812 DYSFO75923 2080 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 NUP214P35658 2090 aaPredicted RBP8.17□□□□□ -1.1
SSH1-205ENST00000546812 PLCE1Q9P212 2302 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 A0A0A6YYJ9 748 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 A0A0G2JND7 137 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 SERINC4A6NH21 518 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 E9PBE3 544 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 NDUFS8O00217 210 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 NME6O75414 186 aaPredicted RBP8.17□□□□□ -1.1
SSH1-205ENST00000546812 PABPC4LP0CB38 370 aaKnown RBP8.17□□□□□ -1.1
SSH1-205ENST00000546812 TROVE2P10155 538 aaKnown RBP eCLIP8.17□□□□□ -1.1
SSH1-205ENST00000546812 G6PDP11413 515 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 BMP4P12644 408 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 ZNF17P17021 662 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 LSP1P33241 339 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 SRP14P37108 136 aaKnown RBP8.17□□□□□ -1.1
SSH1-205ENST00000546812 NR4A2P43354 598 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 GSTM5P46439 218 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 ASMTP46597 345 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 NME5P56597 212 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 EMX2Q04743 252 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 MAD2L1Q13257 205 aaPredicted RBP8.17□□□□□ -1.1
SSH1-205ENST00000546812 PPA1Q15181 289 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 SMU1Q2TAY7 513 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 ZNF628Q5EBL2 1059 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 TMEM201Q5SNT2 666 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 OGFOD2Q6N063 350 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 ESPNLQ6ZVH7 1005 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 BHLHA15Q7RTS1 189 aaPredicted RBP8.17□□□□□ -1.1
SSH1-205ENST00000546812 SSX8Q7RTT4 187 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 NUFIP2Q7Z417 695 aaKnown RBP8.17□□□□□ -1.1
SSH1-205ENST00000546812 SLC44A2Q8IWA5 706 aaPredicted RBP8.17□□□□□ -1.1
SSH1-205ENST00000546812 KRTCAP2Q8N6L1 136 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 OR2V1Q8NHB1 315 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.17□□□□□ -1.1
SSH1-205ENST00000546812 ZNF675Q8TD23 568 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 ACTRT2Q8TDY3 377 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 MUCL1Q96DR8 90 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 ZNF681Q96N22 645 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 ZNF317Q96PQ6 595 aaPredicted RBP8.17□□□□□ -1.1
SSH1-205ENST00000546812 TMEM120AQ9BXJ8 343 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 TCF7L2Q9NQB0 619 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 AIG1Q9NVV5 245 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 UTS2RQ9UKP6 389 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 OR10H1Q9Y4A9 318 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 ZNF780BQ9Y6R6 833 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 NOTCH1P46531 2555 aa8.17□□□□□ -1.1
SSH1-205ENST00000546812 IGLV3-32A0A0A0MS00 114 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 IGHV4-61A0A0C4DH41 118 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 ZNF814B7Z6K7 855 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 TNFSF11O14788 317 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 SCAMP2O15127 329 aaKnown RBP8.16□□□□□ -1.1
SSH1-205ENST00000546812 LY6HO94772 140 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 VENTXO95231 258 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 TGDSO95455 350 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 OPN1LWP04000 364 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 PRPS2P11908 318 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 DDCP20711 480 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 CLK3P49761 638 aaKnown RBP8.16□□□□□ -1.1
SSH1-205ENST00000546812 PDLIM4P50479 330 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 FABP6P51161 128 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 SEC24CP53992 1094 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 RAC1P63000 192 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 C17orf67Q0P5P2 114 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 HEPACAMQ14CZ8 416 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 RNPS1Q15287 305 aaKnown RBP8.16□□□□□ -1.1
SSH1-205ENST00000546812 STK11Q15831 433 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 PRSS53Q2L4Q9 553 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 LSM12Q3MHD2 195 aaKnown RBP8.16□□□□□ -1.1
SSH1-205ENST00000546812 ZNF385BQ569K4 471 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 PRR31Q5SQ13 230 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 TIMM23BQ5SRD1 257 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 PDSS1Q5T2R2 415 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 HBMQ6B0K9 141 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 SPATA19Q7Z5L4 167 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 MARCH3Q86UD3 253 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 TUSC5Q8IXB3 177 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 PIAS4Q8N2W9 510 aaPredicted RBP8.16□□□□□ -1.1
SSH1-205ENST00000546812 GTPBP8Q8N3Z3 284 aaPredicted RBP8.16□□□□□ -1.1
SSH1-205ENST00000546812 RNF128Q8TEB7 428 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 ABHD3Q8WU67 409 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 KAT2AQ92830 837 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 OSTF1Q92882 214 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 CIDECQ96AQ7 238 aaPredicted RBP8.16□□□□□ -1.1
SSH1-205ENST00000546812 C3orf49Q96BT1 292 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 PPCDCQ96CD2 204 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 CHMP6Q96FZ7 201 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 SIKE1Q9BRV8 207 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 PIMREGQ9BSJ6 248 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 CCDC28BQ9BUN5 200 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 BHLHE41Q9C0J9 482 aaPredicted RBP8.16□□□□□ -1.1
SSH1-205ENST00000546812 FAM107BQ9H098 131 aa8.16□□□□□ -1.1
SSH1-205ENST00000546812 RABEP2Q9H5N1 569 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms