RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 OR51F2Q8NH61 342 aa13.34□□□□□ -0.27
CLSTN3-216ENST00000545663 ACTRT2Q8TDY3 377 aa13.34□□□□□ -0.27
CLSTN3-216ENST00000545663 TRPC4APQ8TEL6 797 aa13.34□□□□□ -0.27
CLSTN3-216ENST00000545663 NEU4Q8WWR8 484 aaPredicted RBP13.34□□□□□ -0.27
CLSTN3-216ENST00000545663 EXOSC8Q96B26 276 aaKnown RBP13.34□□□□□ -0.27
CLSTN3-216ENST00000545663 LRRC58Q96CX6 371 aa13.34□□□□□ -0.27
CLSTN3-216ENST00000545663 MRGPRX4Q96LA9 322 aa13.34□□□□□ -0.27
CLSTN3-216ENST00000545663 UBXN10Q96LJ8 280 aa13.34□□□□□ -0.27
CLSTN3-216ENST00000545663 C1orf147Q96MC9 270 aaPredicted RBP13.34□□□□□ -0.27
CLSTN3-216ENST00000545663 CCT8L2Q96SF2 557 aa13.34□□□□□ -0.27
CLSTN3-216ENST00000545663 G6PC2Q9NQR9 355 aa13.34□□□□□ -0.27
CLSTN3-216ENST00000545663 NUDT4Q9NZJ9 180 aa13.34□□□□□ -0.27
CLSTN3-216ENST00000545663 SENP1Q9P0U3 644 aa13.34□□□□□ -0.27
CLSTN3-216ENST00000545663 A0A096LPK6 155 aa13.33□□□□□ -0.28
CLSTN3-216ENST00000545663 SH3PXD2BA1X283 911 aa13.33□□□□□ -0.28
CLSTN3-216ENST00000545663 CYTIPO60759 359 aa13.33□□□□□ -0.28
CLSTN3-216ENST00000545663 GUCY1B2O75343 617 aa13.33□□□□□ -0.28
CLSTN3-216ENST00000545663 C2P06681 752 aa13.33□□□□□ -0.28
CLSTN3-216ENST00000545663 LTA4HP09960 611 aaKnown RBP13.33□□□□□ -0.28
CLSTN3-216ENST00000545663 MYZAPP0CAP1 466 aa13.33□□□□□ -0.28
CLSTN3-216ENST00000545663 PRTN3P24158 256 aa13.33□□□□□ -0.28
CLSTN3-216ENST00000545663 GCH1P30793 250 aa13.33□□□□□ -0.28
CLSTN3-216ENST00000545663 MAGEA12P43365 314 aa13.33□□□□□ -0.28
CLSTN3-216ENST00000545663 PRIM2P49643 509 aa13.33□□□□□ -0.28
CLSTN3-216ENST00000545663 KHKP50053 298 aa13.33□□□□□ -0.28
CLSTN3-216ENST00000545663 IL1RL1Q01638 556 aa13.33□□□□□ -0.28
CLSTN3-216ENST00000545663 DLG1Q12959 904 aa13.33□□□□□ -0.28
CLSTN3-216ENST00000545663 LEG1Q6P5S2 330 aa13.33□□□□□ -0.28
CLSTN3-216ENST00000545663 ISCA2Q86U28 154 aa13.33□□□□□ -0.28
CLSTN3-216ENST00000545663 OR52E4Q8NGH9 312 aa13.33□□□□□ -0.28
CLSTN3-216ENST00000545663 ZNF524Q96C55 264 aa13.33□□□□□ -0.28
CLSTN3-216ENST00000545663 RACGAP1Q9H0H5 632 aa13.33□□□□□ -0.28
CLSTN3-216ENST00000545663 ASB6Q9NWX5 421 aa13.33□□□□□ -0.28
CLSTN3-216ENST00000545663 TAS2R16Q9NYV7 291 aa13.33□□□□□ -0.28
CLSTN3-216ENST00000545663 ICAM5Q9UMF0 924 aa13.33□□□□□ -0.28
CLSTN3-216ENST00000545663 COL7A1Q02388 2944 aa13.33□□□□□ -0.28
CLSTN3-216ENST00000545663 TRAV20A0A0B4J274 112 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 DNAJC9-AS1A6NH13 148 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 SYCE1LA8MT33 242 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 ZNF724A8MTY0 619 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 KLF11O14901 512 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 PRSS23O95084 383 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 PRB2P02812 416 aaPredicted RBP13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 SHBGP04278 402 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 GSTA1P08263 222 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 RBP1P09455 135 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 H2AFXP16104 143 aaPredicted RBP13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 OMGP23515 440 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 LMO4P61968 165 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 EFNB3Q15768 340 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 HDXQ7Z353 690 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 L3MBTL4Q8NA19 623 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 FBXO27Q8NI29 283 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 RHEBL1Q8TAI7 183 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 STAG3L4Q8TBR4 150 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 ZFP90Q8TF47 636 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 PIK3R3Q92569 461 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 ATOH8Q96SQ7 321 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 DOK1Q99704 481 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 MMP27Q9H306 513 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 IPPKQ9H8X2 491 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 NTN4Q9HB63 628 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 SLC17A5Q9NRA2 495 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 AHSPQ9NZD4 102 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 DCDC2Q9UHG0 476 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 LGALS13Q9UHV8 139 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 TMCO1Q9UM00 188 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 CORINQ9Y5Q5 1042 aa13.32□□□□□ -0.28
CLSTN3-216ENST00000545663 TLDC2A0PJX2 215 aa13.31□□□□□ -0.28
CLSTN3-216ENST00000545663 HMX2A2RU54 273 aa13.31□□□□□ -0.28
CLSTN3-216ENST00000545663 ALG1L2C9J202 215 aa13.31□□□□□ -0.28
CLSTN3-216ENST00000545663 KLHL2O95198 593 aa13.31□□□□□ -0.28
CLSTN3-216ENST00000545663 MTHFD2P13995 350 aa13.31□□□□□ -0.28
CLSTN3-216ENST00000545663 GCAP28676 217 aa13.31□□□□□ -0.28
CLSTN3-216ENST00000545663 GABRA3P34903 492 aa13.31□□□□□ -0.28
CLSTN3-216ENST00000545663 CCT5P48643 541 aa13.31□□□□□ -0.28
CLSTN3-216ENST00000545663 RNF144AP50876 292 aaPredicted RBP13.31□□□□□ -0.28
CLSTN3-216ENST00000545663 RAC3P60763 192 aa13.31□□□□□ -0.28
CLSTN3-216ENST00000545663 ADRM1Q16186 407 aa13.31□□□□□ -0.28
CLSTN3-216ENST00000545663 PRSS53Q2L4Q9 553 aa13.31□□□□□ -0.28
CLSTN3-216ENST00000545663 KRT71Q3SY84 523 aa13.31□□□□□ -0.28
CLSTN3-216ENST00000545663 OR7E24Q6IFN5 339 aa13.31□□□□□ -0.28
CLSTN3-216ENST00000545663 RHOUQ7L0Q8 258 aa13.31□□□□□ -0.28
CLSTN3-216ENST00000545663 GOLGA7Q7Z5G4 137 aa13.31□□□□□ -0.28
CLSTN3-216ENST00000545663 CMC1Q7Z7K0 106 aa13.31□□□□□ -0.28
CLSTN3-216ENST00000545663 ZAR1Q86SH2 424 aa13.31□□□□□ -0.28
CLSTN3-216ENST00000545663 DVL3Q92997 716 aaPredicted RBP13.31□□□□□ -0.28
CLSTN3-216ENST00000545663 VPS11Q9H270 941 aa13.31□□□□□ -0.28
CLSTN3-216ENST00000545663 TPK1Q9H3S4 243 aa13.31□□□□□ -0.28
CLSTN3-216ENST00000545663 VIPAS39Q9H9C1 493 aa13.31□□□□□ -0.28
CLSTN3-216ENST00000545663 Q9N2J8 555 aa13.31□□□□□ -0.28
CLSTN3-216ENST00000545663 FARSBQ9NSD9 589 aaKnown RBP13.31□□□□□ -0.28
CLSTN3-216ENST00000545663 TBK1Q9UHD2 729 aa13.31□□□□□ -0.28
CLSTN3-216ENST00000545663 SLC12A4Q9UP95 1085 aa13.31□□□□□ -0.28
CLSTN3-216ENST00000545663 IGHV1-18A0A0C4DH31 117 aa13.3□□□□□ -0.28
CLSTN3-216ENST00000545663 hCG_2039718K7EN88 272 aa13.3□□□□□ -0.28
CLSTN3-216ENST00000545663 RGS16O15492 202 aaPredicted RBP13.3□□□□□ -0.28
CLSTN3-216ENST00000545663 OIP5O43482 229 aa13.3□□□□□ -0.28
CLSTN3-216ENST00000545663 ESRRBO95718 433 aa13.3□□□□□ -0.28
CLSTN3-216ENST00000545663 OXSR1O95747 527 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms