RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	CHRM4	P08173	479 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	UBTFL6	P0CB48	400 aa	Predicted RBP	11.97	□□□□□ -0.49
POLE-222	ENST00000545015	POU2F1	P14859	743 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	FKBP2	P26885	142 aa	Known RBP	11.97	□□□□□ -0.49
POLE-222	ENST00000545015	CCKAR	P32238	428 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	SFTPD	P35247	375 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	CPOX	P36551	454 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	RNF144A	P50876	292 aa	Predicted RBP	11.97	□□□□□ -0.49
POLE-222	ENST00000545015	CTBP2	P56545	445 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	SESN3	P58005	492 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	HPCA	P84074	193 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	MAPK11	Q15759	364 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	SYPL1	Q16563	259 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	TMEM176B	Q3YBM2	270 aa	Predicted RBP	11.97	□□□□□ -0.49
POLE-222	ENST00000545015	TIGD2	Q4W5G0	525 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	GPAT3	Q53EU6	434 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	COX20	Q5RI15	118 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	PLEKHM3	Q6ZWE6	761 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	SLC43A2	Q8N370	569 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	TMCO5A	Q8N6Q1	288 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	ANKFN1	Q8N957	763 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	RFWD2	Q8NHY2	731 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	SLC25A43	Q8WUT9	341 aa	Predicted RBP	11.97	□□□□□ -0.49
POLE-222	ENST00000545015	MBD6	Q96DN6	1003 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	ITCH	Q96J02	903 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	MARK4	Q96L34	752 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	FOXC2	Q99958	501 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	TACO1	Q9BSH4	297 aa	Known RBP	11.97	□□□□□ -0.49
POLE-222	ENST00000545015	SRXN1	Q9BYN0	137 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	OR10A4	Q9H209	315 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	PLEKHF2	Q9H8W4	249 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	SLCO1B3	Q9NPD5	702 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	TCF7L2	Q9NQB0	619 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	ARGLU1	Q9NWB6	273 aa	Predicted RBP	11.97	□□□□□ -0.49
POLE-222	ENST00000545015	THUMPD1	Q9NXG2	353 aa	Known RBP	11.97	□□□□□ -0.49
POLE-222	ENST00000545015	ST6GALNAC2	Q9UJ37	374 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	GMEB1	Q9Y692	573 aa		11.97	□□□□□ -0.49
POLE-222	ENST00000545015	POLR3G	O15318	223 aa	Predicted RBP	11.96	□□□□□ -0.49
POLE-222	ENST00000545015	BCAS1	O75363	584 aa	Predicted RBP	11.96	□□□□□ -0.49
POLE-222	ENST00000545015	PLG	P00747	810 aa	Predicted RBP	11.96	□□□□□ -0.49
POLE-222	ENST00000545015	GSN	P06396	782 aa		11.96	□□□□□ -0.49
POLE-222	ENST00000545015	CD1E	P15812	388 aa		11.96	□□□□□ -0.49
POLE-222	ENST00000545015	PPP3CB	P16298	524 aa		11.96	□□□□□ -0.49
POLE-222	ENST00000545015	HOXB9	P17482	250 aa	Predicted RBP	11.96	□□□□□ -0.49
POLE-222	ENST00000545015	AGTR1	P30556	359 aa		11.96	□□□□□ -0.49
POLE-222	ENST00000545015	APOBEC1	P41238	236 aa	Known RBP	11.96	□□□□□ -0.49
POLE-222	ENST00000545015	CLK1	P49759	484 aa	Known RBP	11.96	□□□□□ -0.49
POLE-222	ENST00000545015	IDH3A	P50213	366 aa		11.96	□□□□□ -0.49
POLE-222	ENST00000545015	CCR4	P51679	360 aa		11.96	□□□□□ -0.49
POLE-222	ENST00000545015	IST1	P53990	364 aa		11.96	□□□□□ -0.49
POLE-222	ENST00000545015	BEND4	Q6ZU67	534 aa		11.96	□□□□□ -0.49
POLE-222	ENST00000545015	OR9I1	Q8NGQ6	314 aa		11.96	□□□□□ -0.49
POLE-222	ENST00000545015	NRGN	Q92686	78 aa		11.96	□□□□□ -0.49
POLE-222	ENST00000545015	GTF2H4	Q92759	462 aa		11.96	□□□□□ -0.49
POLE-222	ENST00000545015	REXO5	Q96IC2	774 aa	Known RBP	11.96	□□□□□ -0.49
POLE-222	ENST00000545015	WFIKKN1	Q96NZ8	548 aa		11.96	□□□□□ -0.49
POLE-222	ENST00000545015	CCDC106	Q9BWC9	280 aa		11.96	□□□□□ -0.49
POLE-222	ENST00000545015	TPT1P8	Q9HAU6	139 aa		11.96	□□□□□ -0.49
POLE-222	ENST00000545015	BCO1	Q9HAY6	547 aa		11.96	□□□□□ -0.49
POLE-222	ENST00000545015	FANCF	Q9NPI8	374 aa		11.96	□□□□□ -0.49
POLE-222	ENST00000545015	SERINC1	Q9NRX5	453 aa		11.96	□□□□□ -0.49
POLE-222	ENST00000545015	CALML5	Q9NZT1	146 aa		11.96	□□□□□ -0.49
POLE-222	ENST00000545015	KLHL13	Q9P2N7	655 aa		11.96	□□□□□ -0.49
POLE-222	ENST00000545015	ABCA4	P78363	2273 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	HRNR	Q86YZ3	2850 aa	Predicted RBP	11.95	□□□□□ -0.5
POLE-222	ENST00000545015	MPDZ	O75970	2070 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	CASK	O14936	926 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	DNPH1	O43598	174 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	ADAM11	O75078	769 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	PRKD3	O94806	890 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	DBI	P07108	87 aa	Known RBP	11.95	□□□□□ -0.5
POLE-222	ENST00000545015	TFPT	P0C1Z6	253 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	BMP2	P12643	396 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	CRYGS	P22914	178 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	SLC7A1	P30825	629 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	ATP4B	P51164	291 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	MAP2K6	P52564	334 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	PPP2R2A	P63151	447 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	GNA13	Q14344	377 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	ZSWIM7	Q19AV6	140 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	PAMR1	Q6UXH9	720 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	TMPPE	Q6ZT21	453 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	FCRLA	Q7L513	359 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	GRINA	Q7Z429	371 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	FUNDC1	Q8IVP5	155 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	ARFGAP2	Q8N6H7	521 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	ABHD3	Q8WU67	409 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	CKAP2	Q8WWK9	683 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	ROBO4	Q8WZ75	1007 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	PAIP1	Q9H074	479 aa	Known RBP	11.95	□□□□□ -0.5
POLE-222	ENST00000545015	QRSL1	Q9H0R6	528 aa	Known RBP	11.95	□□□□□ -0.5
POLE-222	ENST00000545015	SLC52A3	Q9NQ40	469 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	INTS9	Q9NV88	658 aa	Known RBP	11.95	□□□□□ -0.5
POLE-222	ENST00000545015	ZNF226	Q9NYT6	803 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	P2RX2	Q9UBL9	471 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	CHRNA9	Q9UGM1	479 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	ING1	Q9UK53	422 aa	Predicted RBP	11.95	□□□□□ -0.5
POLE-222	ENST00000545015	ITGB1BP2	Q9UKP3	347 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	CLEC4A	Q9UMR7	237 aa		11.95	□□□□□ -0.5
POLE-222	ENST00000545015	SPIN1	Q9Y657	262 aa	Predicted RBP	11.95	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms