RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 OR2W6PQ8NHA6 318 aa13.64□□□□□ -0.23
CLSTN3-213ENST00000541953 MTERF3Q96E29 417 aa13.64□□□□□ -0.23
CLSTN3-213ENST00000541953 MRGPRX4Q96LA9 322 aa13.64□□□□□ -0.23
CLSTN3-213ENST00000541953 HS6ST2Q96MM7 605 aa13.64□□□□□ -0.23
CLSTN3-213ENST00000541953 OR5B2Q96R09 309 aa13.64□□□□□ -0.23
CLSTN3-213ENST00000541953 OR7D2Q96RA2 312 aa13.64□□□□□ -0.23
CLSTN3-213ENST00000541953 CACNG6Q9BXT2 260 aa13.64□□□□□ -0.23
CLSTN3-213ENST00000541953 KLHL9Q9P2J3 617 aa13.64□□□□□ -0.23
CLSTN3-213ENST00000541953 DTNAQ9Y4J8 743 aa13.64□□□□□ -0.23
CLSTN3-213ENST00000541953 GOLGA8QA0A0J9YX86 632 aa13.63□□□□□ -0.23
CLSTN3-213ENST00000541953 GOLGA8OA6NCC3 632 aa13.63□□□□□ -0.23
CLSTN3-213ENST00000541953 A8MV72 311 aaPredicted RBP13.63□□□□□ -0.23
CLSTN3-213ENST00000541953 GOLGA8NF8WBI6 632 aa13.63□□□□□ -0.23
CLSTN3-213ENST00000541953 COPEO14579 308 aa13.63□□□□□ -0.23
CLSTN3-213ENST00000541953 FCMRO60667 390 aa13.63□□□□□ -0.23
CLSTN3-213ENST00000541953 PEX11AO75192 247 aa13.63□□□□□ -0.23
CLSTN3-213ENST00000541953 RAD51DO75771 328 aa13.63□□□□□ -0.23
CLSTN3-213ENST00000541953 C1QCP02747 245 aa13.63□□□□□ -0.23
CLSTN3-213ENST00000541953 HPCAL1P37235 193 aa13.63□□□□□ -0.23
CLSTN3-213ENST00000541953 CASP9P55211 416 aa13.63□□□□□ -0.23
CLSTN3-213ENST00000541953 NAA20P61599 178 aa13.63□□□□□ -0.23
CLSTN3-213ENST00000541953 MAPK14Q16539 360 aa13.63□□□□□ -0.23
CLSTN3-213ENST00000541953 XKR7Q5GH72 579 aa13.63□□□□□ -0.23
CLSTN3-213ENST00000541953 ABLIM2Q6H8Q1 611 aa13.63□□□□□ -0.23
CLSTN3-213ENST00000541953 ZCCHC23Q6ZST2 131 aa13.63□□□□□ -0.23
CLSTN3-213ENST00000541953 SLC43A2Q8N370 569 aa13.63□□□□□ -0.23
CLSTN3-213ENST00000541953 ZNF525Q8N782 197 aa13.63□□□□□ -0.23
CLSTN3-213ENST00000541953 ZNF433Q8N7K0 673 aaPredicted RBP13.63□□□□□ -0.23
CLSTN3-213ENST00000541953 OR10H5Q8NGA6 315 aa13.63□□□□□ -0.23
CLSTN3-213ENST00000541953 OR5W2Q8NH69 310 aa13.63□□□□□ -0.23
CLSTN3-213ENST00000541953 ADAMTS15Q8TE58 950 aa13.63□□□□□ -0.23
CLSTN3-213ENST00000541953 THUMPD3Q9BV44 507 aaKnown RBP13.63□□□□□ -0.23
CLSTN3-213ENST00000541953 NGBQ9NPG2 151 aa13.63□□□□□ -0.23
CLSTN3-213ENST00000541953 TMED5Q9Y3A6 229 aa13.63□□□□□ -0.23
CLSTN3-213ENST00000541953 FAM234BA2RU67 622 aa13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 GJE1A6NN92 205 aa13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 ZNF716A6NP11 495 aa13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 GTPBP1O00178 669 aaKnown RBP13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 PHF1O43189 567 aaPredicted RBP13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 ZNF264O43296 627 aa13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 DNAJA2O60884 412 aa13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 LY6HO94772 140 aa13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 PGM3O95394 542 aa13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 HSPA4LO95757 839 aa13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 UBL4AP11441 157 aa13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 KRT4P19013 534 aa13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 ALDH3A1P30838 453 aa13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 ASMTP46597 345 aa13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 CCT5P48643 541 aa13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 DIO1P49895 249 aa13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 HBA1P69905 142 aa13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 TMEM249Q2WGJ8 235 aa13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 ARL13AQ5H913 290 aaPredicted RBP13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 TIMM23BQ5SRD1 257 aa13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 HMGN2P46Q86SG4 172 aa13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 IFT20Q8IY31 132 aa13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 CLECL1Q8IZS7 167 aa13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 PIAS4Q8N2W9 510 aaPredicted RBP13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 ZNF527Q8NB42 609 aa13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 OR52N5Q8NH56 324 aa13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 OR5P2Q8WZ92 322 aa13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 SDF2Q99470 211 aa13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 ALG2Q9H553 416 aa13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 MANSC1Q9H8J5 431 aa13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 HHATLQ9HCP6 504 aa13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 TRAF6Q9Y4K3 522 aa13.62□□□□□ -0.23
CLSTN3-213ENST00000541953 MALRD1Q5VYJ5 2156 aa13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 SERINC4A6NH21 518 aa13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 OR5H1A6NKK0 313 aa13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 ZNF724A8MTY0 619 aa13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 TRIM13O60858 407 aa13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 UGT2B17O75795 530 aa13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 CYP7B1O75881 506 aa13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 UBTFL6P0CB48 400 aaPredicted RBP13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 GGT1P19440 569 aa13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 ZNF83P51522 516 aa13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 NUDT6P53370 316 aa13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 SESN3P58005 492 aa13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 SLC25A3Q00325 362 aa13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 GPR68Q15743 365 aa13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 CHRFAM7AQ494W8 412 aa13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 SPDYE7PQ495Y7 208 aa13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 C3orf33Q6P1S2 294 aa13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 PODNL1Q6PEZ8 512 aa13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 R3HCC1LQ7Z5L2 792 aaKnown RBP13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 RIMKLAQ8IXN7 391 aa13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 OR56A1Q8NGH5 318 aa13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 ARL5BQ96KC2 179 aa13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 GRIP2Q9C0E4 1043 aa13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 HOXD1Q9GZZ0 328 aa13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 IQCGQ9H095 443 aaKnown RBP13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 SLC17A7Q9P2U7 560 aa13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 MKLN1Q9UL63 735 aa13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 FAF1Q9UNN5 650 aaPredicted RBP13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 SLC25A15Q9Y619 301 aa13.61□□□□□ -0.23
CLSTN3-213ENST00000541953 H3BNH8 94 aa13.6□□□□□ -0.23
CLSTN3-213ENST00000541953 EIF4E2O60573 245 aaKnown RBP13.6□□□□□ -0.23
CLSTN3-213ENST00000541953 SKAP2O75563 359 aaPredicted RBP13.6□□□□□ -0.23
CLSTN3-213ENST00000541953 SLU7O95391 586 aaKnown RBP13.6□□□□□ -0.23
CLSTN3-213ENST00000541953 FGF4P08620 206 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms