RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 DLGAP1O14490 977 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 CHST10O43529 356 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 LEFTY1O75610 366 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 CYP7B1O75881 506 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 SIX3O95343 332 aaPredicted RBP11.72□□□□□ -0.53
DDX55-206ENST00000539934 NFATC1O95644 943 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 IGHEP01854 428 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 MTHFD2P13995 350 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 TSPAN8P19075 237 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 ST8SIA6P61647 398 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 SORDQ00796 357 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 VPS26BQ4G0F5 336 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 UNC50Q53HI1 259 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 NHLRC3Q5JS37 347 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 MED27Q6P2C8 311 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 SLITRK4Q8IW52 837 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 MS4A15Q8N5U1 240 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 OR5T3Q8NGG3 340 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 CPT1CQ8TCG5 803 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 TM4SF18Q96CE8 201 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 HHIPQ96QV1 700 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 TMEM181Q9P2C4 612 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 IL20RAQ9UHF4 553 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 IKZF3Q9UKT9 509 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 PLXNB3Q9ULL4 1909 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 EML5Q05BV3 1969 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 TRBV5-4A0A0C4DH59 114 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 TULP3O75386 442 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 SRPRAP08240 638 aaKnown RBP11.72□□□□□ -0.53
DDX55-206ENST00000539934 OR2T7P0C7T2 308 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 NCF1P14598 390 aaPredicted RBP11.72□□□□□ -0.53
DDX55-206ENST00000539934 ARSAP15289 507 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 CNR2P34972 360 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 CLCN7P51798 805 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 PRKXP51817 358 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 DGKEP52429 567 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 RAP1BP61224 184 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 PTSQ03393 145 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 ARSIQ5FYB1 569 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 DCAF10Q5QP82 559 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 ULK3Q6PHR2 472 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 PEG10Q86TG7 708 aaKnown RBP11.72□□□□□ -0.53
DDX55-206ENST00000539934 NXPE1Q8N323 547 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 CLDN19Q8N6F1 224 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 OR5J2Q8NH18 312 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 RNASE8Q8TDE3 154 aaKnown RBP11.72□□□□□ -0.53
DDX55-206ENST00000539934 MR1Q95460 341 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 OTULINQ96BN8 352 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 SCNM1Q9BWG6 230 aa11.72□□□□□ -0.53
DDX55-206ENST00000539934 CXorf65A6NEN9 183 aa11.71□□□□□ -0.53
DDX55-206ENST00000539934 C1orf196B1AJZ1 125 aa11.71□□□□□ -0.53
DDX55-206ENST00000539934 TRDCB7Z8K6 153 aa11.71□□□□□ -0.53
DDX55-206ENST00000539934 K7EP13 123 aa11.71□□□□□ -0.53
DDX55-206ENST00000539934 GMFGO60234 142 aa11.71□□□□□ -0.53
DDX55-206ENST00000539934 KAT7O95251 611 aa11.71□□□□□ -0.53
DDX55-206ENST00000539934 C1SP09871 688 aa11.71□□□□□ -0.53
DDX55-206ENST00000539934 CISD3P0C7P0 127 aa11.71□□□□□ -0.53
DDX55-206ENST00000539934 GIMD1P0DJR0 217 aa11.71□□□□□ -0.53
DDX55-206ENST00000539934 IDH3GP51553 393 aaPredicted RBP11.71□□□□□ -0.53
DDX55-206ENST00000539934 RPA4Q13156 261 aa11.71□□□□□ -0.53
DDX55-206ENST00000539934 LRRC32Q14392 662 aa11.71□□□□□ -0.53
DDX55-206ENST00000539934 GPRC6AQ5T6X5 926 aa11.71□□□□□ -0.53
DDX55-206ENST00000539934 DMRTA1Q5VZB9 504 aa11.71□□□□□ -0.53
DDX55-206ENST00000539934 FAHD2BQ6P2I3 314 aaPredicted RBP11.71□□□□□ -0.53
DDX55-206ENST00000539934 BLOC1S3Q6QNY0 202 aa11.71□□□□□ -0.53
DDX55-206ENST00000539934 TMEM108Q6UXF1 575 aa11.71□□□□□ -0.53
DDX55-206ENST00000539934 QSOX2Q6ZRP7 698 aa11.71□□□□□ -0.53
DDX55-206ENST00000539934 FAHD2AQ96GK7 314 aa11.71□□□□□ -0.53
DDX55-206ENST00000539934 UCN2Q96RP3 112 aa11.71□□□□□ -0.53
DDX55-206ENST00000539934 MRPL13Q9BYD1 178 aaKnown RBP11.71□□□□□ -0.53
DDX55-206ENST00000539934 MTG2Q9H4K7 406 aa11.71□□□□□ -0.53
DDX55-206ENST00000539934 EXO5Q9H790 373 aa11.71□□□□□ -0.53
DDX55-206ENST00000539934 NOL11Q9H8H0 719 aaKnown RBP11.71□□□□□ -0.53
DDX55-206ENST00000539934 FBRSQ9HAH7 460 aa11.71□□□□□ -0.53
DDX55-206ENST00000539934 ZDHHC3Q9NYG2 299 aa11.71□□□□□ -0.53
DDX55-206ENST00000539934 IL36AQ9UHA7 158 aa11.71□□□□□ -0.53
DDX55-206ENST00000539934 NAGKQ9UJ70 344 aa11.71□□□□□ -0.53
DDX55-206ENST00000539934 SLC5A6Q9Y289 635 aa11.71□□□□□ -0.53
DDX55-206ENST00000539934 HELZ2Q9BYK8 2649 aaKnown RBP11.71□□□□□ -0.53
DDX55-206ENST00000539934 OTOL1A6NHN0 477 aaPredicted RBP11.71□□□□□ -0.54
DDX55-206ENST00000539934 A6NLC8 198 aa11.71□□□□□ -0.54
DDX55-206ENST00000539934 PATE3B3GLJ2 98 aa11.71□□□□□ -0.54
DDX55-206ENST00000539934 SYT5O00445 386 aa11.71□□□□□ -0.54
DDX55-206ENST00000539934 SLC25A14O95258 325 aaPredicted RBP11.71□□□□□ -0.54
DDX55-206ENST00000539934 CD1BP29016 333 aa11.71□□□□□ -0.54
DDX55-206ENST00000539934 DCDP81605 110 aaKnown RBP11.71□□□□□ -0.54
DDX55-206ENST00000539934 PMP22Q01453 160 aa11.71□□□□□ -0.54
DDX55-206ENST00000539934 KLF10Q13118 480 aa11.71□□□□□ -0.54
DDX55-206ENST00000539934 FGFBP1Q14512 234 aa11.71□□□□□ -0.54
DDX55-206ENST00000539934 GBX1Q14549 363 aa11.71□□□□□ -0.54
DDX55-206ENST00000539934 PIGGQ5H8A4 983 aa11.71□□□□□ -0.54
DDX55-206ENST00000539934 GPSM1Q86YR5 675 aa11.71□□□□□ -0.54
DDX55-206ENST00000539934 SEMA6DQ8NFY4 1073 aa11.71□□□□□ -0.54
DDX55-206ENST00000539934 ZNF596Q8TC21 504 aa11.71□□□□□ -0.54
DDX55-206ENST00000539934 ASB15Q8WXK1 588 aa11.71□□□□□ -0.54
DDX55-206ENST00000539934 NDUFAF3Q9BU61 184 aa11.71□□□□□ -0.54
DDX55-206ENST00000539934 PCBD2Q9H0N5 130 aa11.71□□□□□ -0.54
DDX55-206ENST00000539934 NT5DC2Q9H857 520 aa11.71□□□□□ -0.54
DDX55-206ENST00000539934 TNFRSF12AQ9NP84 129 aa11.71□□□□□ -0.54
DDX55-206ENST00000539934 CD84Q9UIB8 345 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms