RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 Q6ZT83 130 aa13.6□□□□□ -0.23
UBE3B-211ENST00000539843 NUFIP2Q7Z417 695 aaKnown RBP13.6□□□□□ -0.23
UBE3B-211ENST00000539843 GALNT5Q7Z7M9 940 aa13.6□□□□□ -0.23
UBE3B-211ENST00000539843 RIMKLAQ8IXN7 391 aa13.6□□□□□ -0.23
UBE3B-211ENST00000539843 THUMPD3Q9BV44 507 aaKnown RBP13.6□□□□□ -0.23
UBE3B-211ENST00000539843 COQ10BQ9H8M1 238 aa13.6□□□□□ -0.23
UBE3B-211ENST00000539843 ANKZF1Q9H8Y5 726 aa13.6□□□□□ -0.23
UBE3B-211ENST00000539843 WDR45Q9Y484 360 aa13.6□□□□□ -0.23
UBE3B-211ENST00000539843 KCNE3Q9Y6H6 103 aa13.6□□□□□ -0.23
UBE3B-211ENST00000539843 IGHV3-15A0A0B4J1V0 119 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 A0A1W2PNR3 127 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 ZNF724A8MTY0 619 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 SULT2B1O00204 365 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 RGS16O15492 202 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-211ENST00000539843 OIP5O43482 229 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 PLAUP00749 431 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 UQCRC2P22695 453 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 IDUAP35475 653 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 CHI3L1P36222 383 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-211ENST00000539843 APOBEC1P41238 236 aaKnown RBP13.59□□□□□ -0.23
UBE3B-211ENST00000539843 OR3A2P47893 321 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 KHKP50053 298 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 VSNL1P62760 191 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 ZNF844Q08AG5 666 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 VEZF1Q14119 521 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 GNA13Q14344 377 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 TAB1Q15750 504 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 CHI3L2Q15782 390 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 KRT71Q3SY84 523 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 NCMAPQ5T1S8 102 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 OR4F3Q6IEY1 312 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 P2RY8Q86VZ1 359 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 ZNF619Q8N2I2 560 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 CIARTQ8N365 385 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-211ENST00000539843 TRIML2Q8N7C3 387 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 OR8J2Q8NGG1 315 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 PPP1R36Q96LQ0 422 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 PSD2Q9BQI7 771 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 ZNF350Q9GZX5 532 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 OR51I1Q9H343 314 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 MKLN1Q9UL63 735 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-211ENST00000539843 RAP2CQ9Y3L5 183 aa13.59□□□□□ -0.23
UBE3B-211ENST00000539843 PRSS51A0A1B0GVH4 220 aa13.58□□□□□ -0.24
UBE3B-211ENST00000539843 ETV2O00321 342 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-211ENST00000539843 GPR171O14626 319 aa13.58□□□□□ -0.24
UBE3B-211ENST00000539843 TM9SF1O15321 606 aa13.58□□□□□ -0.24
UBE3B-211ENST00000539843 BIRC5O15392 142 aa13.58□□□□□ -0.24
UBE3B-211ENST00000539843 CYTIPO60759 359 aa13.58□□□□□ -0.24
UBE3B-211ENST00000539843 NTN1O95631 604 aa13.58□□□□□ -0.24
UBE3B-211ENST00000539843 CPSF4O95639 269 aaKnown RBP13.58□□□□□ -0.24
UBE3B-211ENST00000539843 TP53P04637 393 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-211ENST00000539843 UQCRBP14927 111 aa13.58□□□□□ -0.24
UBE3B-211ENST00000539843 GGT1P19440 569 aa13.58□□□□□ -0.24
UBE3B-211ENST00000539843 DIO1P49895 249 aa13.58□□□□□ -0.24
UBE3B-211ENST00000539843 RPL14P50914 215 aaKnown RBP13.58□□□□□ -0.24
UBE3B-211ENST00000539843 SESN3P58005 492 aa13.58□□□□□ -0.24
UBE3B-211ENST00000539843 ABCE1P61221 599 aaKnown RBP13.58□□□□□ -0.24
UBE3B-211ENST00000539843 TXNL4AP83876 142 aaKnown RBP13.58□□□□□ -0.24
UBE3B-211ENST00000539843 SKP2Q13309 424 aa13.58□□□□□ -0.24
UBE3B-211ENST00000539843 PPA1Q15181 289 aa13.58□□□□□ -0.24
UBE3B-211ENST00000539843 SYT14P1Q58G82 188 aa13.58□□□□□ -0.24
UBE3B-211ENST00000539843 TMPPEQ6ZT21 453 aa13.58□□□□□ -0.24
UBE3B-211ENST00000539843 LRRC34Q8IZ02 419 aa13.58□□□□□ -0.24
UBE3B-211ENST00000539843 CLECL1Q8IZS7 167 aa13.58□□□□□ -0.24
UBE3B-211ENST00000539843 UBE2J2Q8N2K1 259 aa13.58□□□□□ -0.24
UBE3B-211ENST00000539843 SMAP2Q8WU79 429 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-211ENST00000539843 XAGE5Q8WWM1 108 aa13.58□□□□□ -0.24
UBE3B-211ENST00000539843 RADILQ96JH8 1075 aa13.58□□□□□ -0.24
UBE3B-211ENST00000539843 KLHDC3Q9BQ90 382 aa13.58□□□□□ -0.24
UBE3B-211ENST00000539843 BARX1Q9HBU1 254 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-211ENST00000539843 ACER3Q9NUN7 267 aa13.58□□□□□ -0.24
UBE3B-211ENST00000539843 DSCAMO60469 2012 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 WDR91A4D1P6 747 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 DNPH1O43598 174 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 TYROBPO43914 113 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 EFNA2O43921 213 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 KIAA0513O60268 411 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 UGT2B17O75795 530 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 LYZL6O75951 148 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 GUSBP08236 651 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 OR12D1P0DN82 309 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 NID1P14543 1247 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 HTR3AP46098 478 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 BSPH1Q075Z2 132 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 LRRC74AQ0VAA2 488 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 TSC22D1Q15714 1073 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 CLEC12BQ2HXU8 276 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 ZNF672Q499Z4 452 aaPredicted RBP13.57□□□□□ -0.24
UBE3B-211ENST00000539843 GPAT3Q53EU6 434 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 TIMM23BQ5SRD1 257 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 TNFAIP8L2Q6P589 184 aaPredicted RBP13.57□□□□□ -0.24
UBE3B-211ENST00000539843 GRINAQ7Z429 371 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 CROCCP2Q86T23 111 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 ARFGAP2Q8N6H7 521 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 ZNF781Q8N8C0 355 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 PIGXQ8TBF5 258 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 RAB3IL1Q8TBN0 382 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 PIWIL2Q8TC59 973 aaKnown RBP13.57□□□□□ -0.24
UBE3B-211ENST00000539843 MIPOL1Q8TD10 442 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms