RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 SERHL2Q9H4I8 314 aa13.38□□□□□ -0.27
USB1-203ENST00000539737 ZNF385DQ9H6B1 395 aa13.38□□□□□ -0.27
USB1-203ENST00000539737 UBQLN4Q9NRR5 601 aa13.38□□□□□ -0.27
USB1-203ENST00000539737 ZNF226Q9NYT6 803 aa13.38□□□□□ -0.27
USB1-203ENST00000539737 MED11Q9P086 117 aa13.38□□□□□ -0.27
USB1-203ENST00000539737 CCDC167Q9P0B6 97 aa13.38□□□□□ -0.27
USB1-203ENST00000539737 KLHL14Q9P2G3 628 aa13.38□□□□□ -0.27
USB1-203ENST00000539737 ALG1L2C9J202 215 aa13.37□□□□□ -0.27
USB1-203ENST00000539737 H3BML4 177 aa13.37□□□□□ -0.27
USB1-203ENST00000539737 SCDO00767 359 aa13.37□□□□□ -0.27
USB1-203ENST00000539737 KLF4O43474 513 aa13.37□□□□□ -0.27
USB1-203ENST00000539737 AQP8O94778 261 aa13.37□□□□□ -0.27
USB1-203ENST00000539737 NTN1O95631 604 aa13.37□□□□□ -0.27
USB1-203ENST00000539737 OXSR1O95747 527 aaPredicted RBP13.37□□□□□ -0.27
USB1-203ENST00000539737 TBXA2RP21731 343 aa13.37□□□□□ -0.27
USB1-203ENST00000539737 SLC6A8P48029 635 aa13.37□□□□□ -0.27
USB1-203ENST00000539737 ATP5J2P56134 94 aa13.37□□□□□ -0.27
USB1-203ENST00000539737 RPS3AP61247 264 aaKnown RBP13.37□□□□□ -0.27
USB1-203ENST00000539737 HPCAP84074 193 aa13.37□□□□□ -0.27
USB1-203ENST00000539737 SRSF2Q01130 221 aaKnown RBP13.37□□□□□ -0.27
USB1-203ENST00000539737 C17orf67Q0P5P2 114 aa13.37□□□□□ -0.27
USB1-203ENST00000539737 AGKQ53H12 422 aa13.37□□□□□ -0.27
USB1-203ENST00000539737 CGB2Q6NT52 195 aa13.37□□□□□ -0.27
USB1-203ENST00000539737 HMBOX1Q6NT76 420 aa13.37□□□□□ -0.27
USB1-203ENST00000539737 TNFAIP8L2Q6P589 184 aaPredicted RBP13.37□□□□□ -0.27
USB1-203ENST00000539737 ZNF704Q6ZNC4 412 aaPredicted RBP13.37□□□□□ -0.27
USB1-203ENST00000539737 PLEKHM3Q6ZWE6 761 aa13.37□□□□□ -0.27
USB1-203ENST00000539737 GALNT10Q86SR1 603 aa13.37□□□□□ -0.27
USB1-203ENST00000539737 WFDC8Q8IUA0 241 aa13.37□□□□□ -0.27
USB1-203ENST00000539737 MISPQ8IVT2 679 aa13.37□□□□□ -0.27
USB1-203ENST00000539737 ZNF317Q96PQ6 595 aaPredicted RBP13.37□□□□□ -0.27
USB1-203ENST00000539737 NPAS1Q99742 590 aa13.37□□□□□ -0.27
USB1-203ENST00000539737 ZNF337Q9Y3M9 751 aa13.37□□□□□ -0.27
USB1-203ENST00000539737 NUP214P35658 2090 aaPredicted RBP13.36□□□□□ -0.27
USB1-203ENST00000539737 A0A096LPI6 279 aa13.36□□□□□ -0.27
USB1-203ENST00000539737 A0A1W2PQD3 144 aa13.36□□□□□ -0.27
USB1-203ENST00000539737 C16orf97H3BN30 126 aa13.36□□□□□ -0.27
USB1-203ENST00000539737 ANGPTL1O95841 491 aa13.36□□□□□ -0.27
USB1-203ENST00000539737 GSNP06396 782 aa13.36□□□□□ -0.27
USB1-203ENST00000539737 CRHP06850 196 aa13.36□□□□□ -0.27
USB1-203ENST00000539737 PON3Q15166 354 aa13.36□□□□□ -0.27
USB1-203ENST00000539737 TSC22D1Q15714 1073 aa13.36□□□□□ -0.27
USB1-203ENST00000539737 ARHGAP11BQ3KRB8 267 aa13.36□□□□□ -0.27
USB1-203ENST00000539737 HEPHL1Q6MZM0 1159 aa13.36□□□□□ -0.27
USB1-203ENST00000539737 C20orf204Q6ZNR8 217 aa13.36□□□□□ -0.27
USB1-203ENST00000539737 ZAR1Q86SH2 424 aa13.36□□□□□ -0.27
USB1-203ENST00000539737 RNF130Q86XS8 419 aa13.36□□□□□ -0.27
USB1-203ENST00000539737 FUNDC1Q8IVP5 155 aa13.36□□□□□ -0.27
USB1-203ENST00000539737 OR2M3Q8NG83 312 aa13.36□□□□□ -0.27
USB1-203ENST00000539737 ZFP90Q8TF47 636 aa13.36□□□□□ -0.27
USB1-203ENST00000539737 GTF2H4Q92759 462 aa13.36□□□□□ -0.27
USB1-203ENST00000539737 NSRP1Q9H0G5 558 aaKnown RBP13.36□□□□□ -0.27
USB1-203ENST00000539737 RAD21L1Q9H4I0 556 aa13.36□□□□□ -0.27
USB1-203ENST00000539737 POLE3Q9NRF9 147 aa13.36□□□□□ -0.27
USB1-203ENST00000539737 ALPK2Q86TB3 2170 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 SVEP1Q4LDE5 3571 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 IGLV3-32A0A0A0MS00 114 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 H3BNH8 94 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 NDUFB5O43674 189 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 NDUFS7O75251 213 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 STX11O75558 287 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 GUSBP08236 651 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 OR12D1P0DN82 309 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 CDKN1AP38936 164 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 VEZF1Q14119 521 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 FGFBP1Q14512 234 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 GLYR1Q49A26 553 aaPredicted RBP13.35□□□□□ -0.27
USB1-203ENST00000539737 SLC2A7Q6PXP3 512 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 MTERF4Q7Z6M4 381 aaKnown RBP13.35□□□□□ -0.27
USB1-203ENST00000539737 MARCH3Q86UD3 253 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 FADS6Q8N9I5 356 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 OR4C3Q8NH37 302 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 DUSP19Q8WTR2 217 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 TSPEARQ8WU66 669 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 TMEM171Q8WVE6 324 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 OIT3Q8WWZ8 545 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 PLPPR2Q96GM1 343 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 SDF2Q99470 211 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 KLHDC3Q9BQ90 382 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 NMUR2Q9GZQ4 415 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 ZNF350Q9GZX5 532 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 TPT1P8Q9HAU6 139 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 FBXO34Q9NWN3 711 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 THUMPD1Q9NXG2 353 aaKnown RBP13.35□□□□□ -0.27
USB1-203ENST00000539737 LEF1Q9UJU2 399 aaPredicted RBP13.35□□□□□ -0.27
USB1-203ENST00000539737 PROCRQ9UNN8 238 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 LAMP3Q9UQV4 416 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 LIPT1Q9Y234 373 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 KCNE3Q9Y6H6 103 aa13.35□□□□□ -0.27
USB1-203ENST00000539737 CADP27708 2225 aa13.34□□□□□ -0.27
USB1-203ENST00000539737 ANK2Q01484 3957 aa13.34□□□□□ -0.27
USB1-203ENST00000539737 A0A1W2PP18 115 aa13.34□□□□□ -0.27
USB1-203ENST00000539737 HMGN4O00479 90 aa13.34□□□□□ -0.27
USB1-203ENST00000539737 ANGPT2O15123 496 aa13.34□□□□□ -0.27
USB1-203ENST00000539737 KIAA0513O60268 411 aa13.34□□□□□ -0.27
USB1-203ENST00000539737 PTNP21246 168 aa13.34□□□□□ -0.27
USB1-203ENST00000539737 PPIBP23284 216 aaKnown RBP13.34□□□□□ -0.27
USB1-203ENST00000539737 ATP12AP54707 1039 aa13.34□□□□□ -0.27
USB1-203ENST00000539737 CASP9P55211 416 aa13.34□□□□□ -0.27
USB1-203ENST00000539737 DMTNQ08495 405 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms