RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 LNP1A1A4G5 178 aa15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 CSO75390 466 aaKnown RBP15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 SCRG1O75711 98 aa15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 AZGP1P25311 298 aaKnown RBP15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 CRYBB2P43320 205 aa15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 SHISA6Q6ZSJ9 500 aa15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 COX15Q7KZN9 410 aa15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 SLC34A3Q8N130 599 aa15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 SLC7A13Q8TCU3 470 aa15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 TRMT61AQ96FX7 289 aaKnown RBP15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 PHOX2BQ99453 314 aa15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 ARPC5LQ9BPX5 153 aa15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 SIDT1Q9NXL6 827 aaKnown RBP15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 SEC14L4Q9UDX3 406 aa15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 MKL2Q9ULH7 1088 aa15.76■□□□□ 0.11
PCDHB17P-201ENST00000539533 D6RAR5 112 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 NTN3O00634 580 aaPredicted RBP15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 BRINP1O60477 761 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 IGKV1D-16P01601 117 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 CT45A8P0DMV1 189 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 CT45A9P0DMV2 189 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 IL7P13232 177 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 NAT1P18440 290 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 PSMA1P25786 263 aaKnown RBP15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 GALNSP34059 522 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 SNRPGP62308 76 aaKnown RBP15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 PSPHP78330 225 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 BIKQ13323 160 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 LARS2Q15031 903 aaKnown RBP15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 SPHARQ15513 63 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 NSDHLQ15738 373 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 TBRG1Q3YBR2 411 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 CT45A2Q5DJT8 189 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 DCST1Q5T197 706 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 GALNT6Q8NCL4 622 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 ZNF578Q96N58 590 aaPredicted RBP15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 WDFY2Q96P53 400 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 PELOQ9BRX2 385 aaKnown RBP15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 FNDC11Q9BVV2 318 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 SRRQ9GZT4 340 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 DNAJC27Q9NZQ0 273 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 NTNG1Q9Y2I2 539 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 A0A1W2PQ09 198 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 ZNF670-ZNF695F2Z2N8 137 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 AK1P00568 194 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 RPS4Y1P22090 263 aaKnown RBP15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 TRHRP34981 398 aaPredicted RBP15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 P2RX3P56373 397 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 EEF1A1P68104 462 aaKnown RBP15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 MEDAGQ5VYS4 303 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 RHBDD1Q8TEB9 315 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 TRIM63Q969Q1 353 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 TMEM80Q96HE8 168 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 LOXL4Q96JB6 756 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 OR8D2Q9GZM6 311 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 VN1R1Q9GZP7 353 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 SLA2Q9H6Q3 261 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 TRIM45Q9H8W5 580 aaPredicted RBP15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 MKKSQ9NPJ1 570 aaPredicted RBP15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 MAN2C1Q9NTJ4 1040 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 KLHL28Q9NXS3 571 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 TMCC3Q9ULS5 477 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 STUB1Q9UNE7 303 aa15.75■□□□□ 0.11
PCDHB17P-201ENST00000539533 TCRBV16S1A1N1A0A5B0 115 aa15.74■□□□□ 0.11
PCDHB17P-201ENST00000539533 SLC35F4A4IF30 521 aa15.74■□□□□ 0.11
PCDHB17P-201ENST00000539533 ICMTO60725 284 aa15.74■□□□□ 0.11
PCDHB17P-201ENST00000539533 ADAP00813 363 aa15.74■□□□□ 0.11
PCDHB17P-201ENST00000539533 OSMP13725 252 aa15.74■□□□□ 0.11
PCDHB17P-201ENST00000539533 GRK6P43250 576 aa15.74■□□□□ 0.11
PCDHB17P-201ENST00000539533 LSM11P83369 360 aaKnown RBP eCLIP15.74■□□□□ 0.11
PCDHB17P-201ENST00000539533 RUNX1T1Q06455 604 aa15.74■□□□□ 0.11
PCDHB17P-201ENST00000539533 CEP78Q5JTW2 689 aa15.74■□□□□ 0.11
PCDHB17P-201ENST00000539533 PLA2G2CQ5R387 149 aa15.74■□□□□ 0.11
PCDHB17P-201ENST00000539533 DBX2Q6ZNG2 339 aa15.74■□□□□ 0.11
PCDHB17P-201ENST00000539533 PRRC1Q96M27 445 aa15.74■□□□□ 0.11
PCDHB17P-201ENST00000539533 FUZQ9BT04 418 aa15.74■□□□□ 0.11
PCDHB17P-201ENST00000539533 UCK2Q9BZX2 261 aa15.74■□□□□ 0.11
PCDHB17P-201ENST00000539533 RACGAP1Q9H0H5 632 aa15.74■□□□□ 0.11
PCDHB17P-201ENST00000539533 CACYBPQ9HB71 228 aaKnown RBP15.74■□□□□ 0.11
PCDHB17P-201ENST00000539533 TIGARQ9NQ88 270 aa15.74■□□□□ 0.11
PCDHB17P-201ENST00000539533 REV1Q9UBZ9 1251 aa15.74■□□□□ 0.11
PCDHB17P-201ENST00000539533 PCDHGA5Q9Y5G8 931 aa15.74■□□□□ 0.11
PCDHB17P-201ENST00000539533 CLCA3PQ9Y6N3 262 aa15.74■□□□□ 0.11
PCDHB17P-201ENST00000539533 LINC00854A0A1B0GVQ3 168 aa15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 MEIOCA2RUB1 952 aa15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 CPSF4LA6NMK7 179 aaKnown RBP15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 SOX14O95416 240 aa15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 LDOC1O95751 146 aaPredicted RBP15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 DBIP07108 87 aaKnown RBP15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 THBS1P07996 1170 aa15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 TGM4P49221 684 aa15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 RGS8P57771 180 aaPredicted RBP15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 NCF4Q15080 339 aa15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 FLYWCH1Q4VC44 716 aa15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 TMEM201Q5SNT2 666 aa15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 CACTIN-AS1Q8N1I8 211 aa15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 MND1Q9BWT6 205 aa15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 NDUFB11Q9NX14 153 aa15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 CMAHPQ9Y471 501 aa15.73■□□□□ 0.11
PCDHB17P-201ENST00000539533 IQCMA0A1B0GVH7 501 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms