RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.34□□□□□ -0.75
RTN3-209ENST00000538995 ACER3Q9NUN7 267 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 ARGLU1Q9NWB6 273 aaPredicted RBP10.34□□□□□ -0.75
RTN3-209ENST00000538995 ZNF226Q9NYT6 803 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 ST6GALNAC2Q9UJ37 374 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 PRDM4Q9UKN5 801 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 AKAP6Q13023 2319 aa10.34□□□□□ -0.75
RTN3-209ENST00000538995 PRAMEF27A3QJZ7 478 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 AGAP5A6NIR3 686 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 HMGB1P1B2RPK0 211 aaPredicted RBP10.33□□□□□ -0.76
RTN3-209ENST00000538995 POLR3GO15318 223 aaPredicted RBP10.33□□□□□ -0.76
RTN3-209ENST00000538995 CYP7B1O75881 506 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 OPN1LWP04000 364 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 PPP3CBP16298 524 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 FKBP2P26885 142 aaKnown RBP10.33□□□□□ -0.76
RTN3-209ENST00000538995 AGTR1P30556 359 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 KCNJ5P48544 419 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 SESN3P58005 492 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 RAC3P60763 192 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 IRX1P78414 480 aaPredicted RBP10.33□□□□□ -0.76
RTN3-209ENST00000538995 GNA13Q14344 377 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 TMEM176BQ3YBM2 270 aaPredicted RBP10.33□□□□□ -0.76
RTN3-209ENST00000538995 TIGD2Q4W5G0 525 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 TTMPQ5BVD1 217 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 PAMR1Q6UXH9 720 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 OLIG3Q7RTU3 272 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 HDXQ7Z353 690 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 STK32CQ86UX6 486 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 GOLGA6L1Q8N7Z2 621 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 ZNF610Q8N9Z0 462 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 NRGNQ92686 78 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 MBD6Q96DN6 1003 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 ITCHQ96J02 903 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 MARK4Q96L34 752 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 FOXC2Q99958 501 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 MED18Q9BUE0 208 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 SRXN1Q9BYN0 137 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 OR10A4Q9H209 315 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 CXXC4Q9H2H0 198 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 SLC38A1Q9H2H9 487 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 TCF7L2Q9NQB0 619 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 THUMPD1Q9NXG2 353 aaKnown RBP10.33□□□□□ -0.76
RTN3-209ENST00000538995 KLHL13Q9P2N7 655 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 P2RX2Q9UBL9 471 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 SPIN1Q9Y657 262 aaPredicted RBP10.33□□□□□ -0.76
RTN3-209ENST00000538995 PCNX3Q9H6A9 2034 aa10.33□□□□□ -0.76
RTN3-209ENST00000538995 FAM234BA2RU67 622 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 FAAHO00519 579 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 CHRM4P08173 479 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 RPS4Y1P22090 263 aaKnown RBP10.32□□□□□ -0.76
RTN3-209ENST00000538995 CRYGSP22914 178 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 DNASE1P24855 282 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 APOBEC1P41238 236 aaKnown RBP10.32□□□□□ -0.76
RTN3-209ENST00000538995 POLR2JP52435 117 aaKnown RBP10.32□□□□□ -0.76
RTN3-209ENST00000538995 ART1P52961 327 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 MVDP53602 400 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 IST1P53990 364 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 STX1BP61266 288 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 KCNJ10P78508 379 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 CHRNEQ04844 493 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 MERTKQ12866 999 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 SYPL1Q16563 259 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 TMEM201Q5SNT2 666 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 DNAJC14Q6Y2X3 702 aaPredicted RBP10.32□□□□□ -0.76
RTN3-209ENST00000538995 BEND4Q6ZU67 534 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 PLEKHM3Q6ZWE6 761 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 FCRLAQ7L513 359 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 GRINAQ7Z429 371 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 ARFGAP2Q8N6H7 521 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 ANKFN1Q8N957 763 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 ABHD3Q8WU67 409 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 STON2Q8WXE9 905 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 ZNF524Q96C55 264 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 MS4A3Q96HJ5 214 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 WFIKKN1Q96NZ8 548 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 CCDC28BQ9BUN5 200 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 CCDC106Q9BWC9 280 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 PLEKHF2Q9H8W4 249 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 MTHFD2LQ9H903 347 aaPredicted RBP10.32□□□□□ -0.76
RTN3-209ENST00000538995 TMEM45AQ9NWC5 275 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 CALML5Q9NZT1 146 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 KLHL9Q9P2J3 617 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 CLEC4AQ9UMR7 237 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 DSPPQ9NZW4 1301 aa10.32□□□□□ -0.76
RTN3-209ENST00000538995 DNPH1O43598 174 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 BCAS1O75363 584 aaPredicted RBP10.31□□□□□ -0.76
RTN3-209ENST00000538995 PRKD3O94806 890 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 ANP32DO95626 131 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 C1QCP02747 245 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 RAF1P04049 648 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 GSNP06396 782 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 DBIP07108 87 aaKnown RBP10.31□□□□□ -0.76
RTN3-209ENST00000538995 NR2F1P10589 423 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 UQCRBP14927 111 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 H2AFXP16104 143 aaPredicted RBP10.31□□□□□ -0.76
RTN3-209ENST00000538995 PSMB1P20618 241 aaKnown RBP10.31□□□□□ -0.76
RTN3-209ENST00000538995 HTR3AP46098 478 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 CLK1P49759 484 aaKnown RBP10.31□□□□□ -0.76
RTN3-209ENST00000538995 MAP2K6P52564 334 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 CRISP3P54108 245 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms