RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 PRSS3P35030 304 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 PPM1AP35813 382 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 PCBP3P57721 371 aaKnown RBP6.39□□□□□ -1.39
SCAPER-203ENST00000538941 CDK5Q00535 292 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 LDLRAD1Q5T700 205 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 TMEM81Q6P7N7 255 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 PRSS45Q7RTY3 260 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 ZNF546Q86UE3 836 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.39□□□□□ -1.39
SCAPER-203ENST00000538941 POMGNT2Q8NAT1 580 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 CLRN3Q8NCR9 226 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 OR8D4Q8NGM9 314 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 OR1J4Q8NGS1 313 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 ZNF563Q8TA94 476 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 LCN9Q8WX39 176 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 ST8SIA2Q92186 375 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 TRMT61AQ96FX7 289 aaKnown RBP6.39□□□□□ -1.39
SCAPER-203ENST00000538941 MS4A4EQ96PG1 132 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 CDCP1Q9H5V8 836 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 C8orf33Q9H7E9 229 aaPredicted RBP6.39□□□□□ -1.39
SCAPER-203ENST00000538941 REV1Q9UBZ9 1251 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 FBXL3Q9UKT7 428 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 ZNF443Q9Y2A4 671 aaPredicted RBP6.39□□□□□ -1.39
SCAPER-203ENST00000538941 TNS1Q9HBL0 1735 aaKnown RBP6.39□□□□□ -1.39
SCAPER-203ENST00000538941 C1orf196B1AJZ1 125 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 SURF4O15260 269 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 NARSO43776 548 aaKnown RBP6.39□□□□□ -1.39
SCAPER-203ENST00000538941 LCMT2O60294 686 aaKnown RBP6.39□□□□□ -1.39
SCAPER-203ENST00000538941 SIX6O95475 246 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 FRKP42685 505 aaPredicted RBP6.39□□□□□ -1.39
SCAPER-203ENST00000538941 OR10A3P58181 314 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 GLT8D1Q68CQ7 371 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 C17orf107Q6ZR85 190 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 DPPA4Q7L190 304 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 KLHDC8AQ8IYD2 350 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 C12orf45Q8N5I9 185 aaPredicted RBP6.39□□□□□ -1.39
SCAPER-203ENST00000538941 LINC00469Q8N7U9 141 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 OR5AR1Q8NGP9 310 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 OR5AK2Q8NH90 309 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 CASTOR1Q8WTX7 329 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 BPIFA2Q96DR5 249 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 QRSL1Q9H0R6 528 aaKnown RBP6.39□□□□□ -1.39
SCAPER-203ENST00000538941 DPEP2Q9H4A9 486 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 ZNF334Q9HCZ1 680 aaPredicted RBP6.39□□□□□ -1.39
SCAPER-203ENST00000538941 UFSP2Q9NUQ7 469 aa6.39□□□□□ -1.39
SCAPER-203ENST00000538941 ZNF236Q9UL36 1845 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 H3BNC9 293 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 EIF1AYO14602 144 aaKnown RBP6.38□□□□□ -1.39
SCAPER-203ENST00000538941 FARS2O95363 451 aaKnown RBP6.38□□□□□ -1.39
SCAPER-203ENST00000538941 SOD2P04179 222 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 LIMS3P0CW19 117 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 LIMS4P0CW20 117 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 GJA1P17302 382 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 CD22P20273 847 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 EIF1AXP47813 144 aaKnown RBP6.38□□□□□ -1.39
SCAPER-203ENST00000538941 ST3GAL2Q16842 350 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 ODF4Q2M2E3 257 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 NKAPLQ5M9Q1 402 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 PRAMEF8Q5VWM4 474 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 PRAMEF7Q5VXH5 474 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 ZCCHC12Q6PEW1 402 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 CD300LDQ6UXZ3 194 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 OVCH1Q7RTY7 1134 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 ZNF584Q8IVC4 421 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 RNF113BQ8IZP6 322 aaKnown RBP6.38□□□□□ -1.39
SCAPER-203ENST00000538941 CPXM2Q8N436 756 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 DNAAF1Q8NEP3 725 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 OR9A2Q8NGT5 310 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 OR2T4Q8NH00 348 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 HAVCR2Q8TDQ0 301 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 THEM6Q8WUY1 208 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 TRMT2BQ96GJ1 504 aaKnown RBP6.38□□□□□ -1.39
SCAPER-203ENST00000538941 SLC25A32Q9H2D1 315 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 SLC38A1Q9H2H9 487 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 UBQLN3Q9H347 655 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 PPP1R3EQ9H7J1 279 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 KLF15Q9UIH9 416 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 ERVK-19Q9WJR5 959 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 SLC35A3Q9Y2D2 325 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 POLR1DQ9Y2S0 133 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 HEBP2Q9Y5Z4 205 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 TRAV18A0A075B6X5 111 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 LOC100509620A0A075B734 347 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 AK1P00568 194 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 AMY2AP04746 511 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 C8AP07357 584 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 CAPZA1P52907 286 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 ERVK-21P61565 698 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 NOGQ13253 232 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 ARHGAP19Q14CB8 494 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 IRF4Q15306 451 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 GSG1Q2KHT4 349 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 Q5BKY6 102 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 ABHD13Q7L211 337 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 ZNF740Q8NDX6 193 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 OR10G6Q8NH81 332 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 PHYHIPQ92561 330 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 MS4A8Q9BY19 250 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 PLA2G12AQ9BZM1 189 aa6.38□□□□□ -1.39
SCAPER-203ENST00000538941 HRASLSQ9HDD0 168 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms