RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 RASGEF1BQ0VAM2 473 aa17.45■□□□□ 0.38
TNFRSF1B-204ENST00000536782 GPR68Q15743 365 aa17.45■□□□□ 0.38
TNFRSF1B-204ENST00000536782 ZNF141Q15928 474 aa17.45■□□□□ 0.38
TNFRSF1B-204ENST00000536782 CLEC12BQ2HXU8 276 aa17.45■□□□□ 0.38
TNFRSF1B-204ENST00000536782 TIGD2Q4W5G0 525 aa17.45■□□□□ 0.38
TNFRSF1B-204ENST00000536782 C6orf120Q7Z4R8 191 aa17.45■□□□□ 0.38
TNFRSF1B-204ENST00000536782 PIWIL2Q8TC59 973 aaKnown RBP17.45■□□□□ 0.38
TNFRSF1B-204ENST00000536782 SMAP2Q8WU79 429 aaPredicted RBP17.45■□□□□ 0.38
TNFRSF1B-204ENST00000536782 OR5B2Q96R09 309 aa17.45■□□□□ 0.38
TNFRSF1B-204ENST00000536782 THUMPD3Q9BV44 507 aaKnown RBP17.45■□□□□ 0.38
TNFRSF1B-204ENST00000536782 LAT2Q9GZY6 243 aa17.45■□□□□ 0.38
TNFRSF1B-204ENST00000536782 ING1Q9UK53 422 aaPredicted RBP17.45■□□□□ 0.38
TNFRSF1B-204ENST00000536782 MXRA5Q9NR99 2828 aa17.45■□□□□ 0.38
TNFRSF1B-204ENST00000536782 SMAD9O15198 467 aaKnown RBP17.44■□□□□ 0.38
TNFRSF1B-204ENST00000536782 FCMRO60667 390 aa17.44■□□□□ 0.38
TNFRSF1B-204ENST00000536782 CYTIPO60759 359 aa17.44■□□□□ 0.38
TNFRSF1B-204ENST00000536782 CYP7B1O75881 506 aa17.44■□□□□ 0.38
TNFRSF1B-204ENST00000536782 BPGMP07738 259 aa17.44■□□□□ 0.38
TNFRSF1B-204ENST00000536782 SOD3P08294 240 aa17.44■□□□□ 0.38
TNFRSF1B-204ENST00000536782 CLDN8P56748 225 aa17.44■□□□□ 0.38
TNFRSF1B-204ENST00000536782 EMX2Q04743 252 aa17.44■□□□□ 0.38
TNFRSF1B-204ENST00000536782 BSPH1Q075Z2 132 aa17.44■□□□□ 0.38
TNFRSF1B-204ENST00000536782 SKP2Q13309 424 aa17.44■□□□□ 0.38
TNFRSF1B-204ENST00000536782 VEZF1Q14119 521 aa17.44■□□□□ 0.38
TNFRSF1B-204ENST00000536782 ETFDHQ16134 617 aa17.44■□□□□ 0.38
TNFRSF1B-204ENST00000536782 ZNF672Q499Z4 452 aaPredicted RBP17.44■□□□□ 0.38
TNFRSF1B-204ENST00000536782 MREGQ8N565 214 aa17.44■□□□□ 0.38
TNFRSF1B-204ENST00000536782 ST8SIA1Q92185 356 aa17.44■□□□□ 0.38
TNFRSF1B-204ENST00000536782 GTPBP3Q969Y2 492 aaKnown RBP17.44■□□□□ 0.38
TNFRSF1B-204ENST00000536782 ROPN1BQ9BZX4 212 aaPredicted RBP17.44■□□□□ 0.38
TNFRSF1B-204ENST00000536782 QRSL1Q9H0R6 528 aaKnown RBP17.44■□□□□ 0.38
TNFRSF1B-204ENST00000536782 SERHL2Q9H4I8 314 aa17.44■□□□□ 0.38
TNFRSF1B-204ENST00000536782 ROPN1Q9HAT0 212 aaPredicted RBP17.44■□□□□ 0.38
TNFRSF1B-204ENST00000536782 SERINC1Q9NRX5 453 aa17.44■□□□□ 0.38
TNFRSF1B-204ENST00000536782 NOP53Q9NZM5 478 aaKnown RBP17.44■□□□□ 0.38
TNFRSF1B-204ENST00000536782 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.44■□□□□ 0.38
TNFRSF1B-204ENST00000536782 PRSS50Q9UI38 385 aa17.44■□□□□ 0.38
TNFRSF1B-204ENST00000536782 KCNE5Q9UJ90 142 aa17.44■□□□□ 0.38
TNFRSF1B-204ENST00000536782 V9GYY5 206 aaPredicted RBP17.44■□□□□ 0.38
TNFRSF1B-204ENST00000536782 A0A1W2PP18 115 aa17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 ZNF724A8MTY0 619 aa17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 C9JVG2 144 aa17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 DNAJA2O60884 412 aa17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 UGT2B17O75795 530 aa17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 LYZL6O75951 148 aa17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 H6PDO95479 791 aa17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 CSTAP01040 98 aa17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 FESP07332 822 aa17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 IDUAP35475 653 aa17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 SMU1Q2TAY7 513 aa17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 ARHGAP11BQ3KRB8 267 aa17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 OR4F3Q6IEY1 312 aa17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 SEZ6L2Q6UXD5 910 aa17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 DNAJC14Q6Y2X3 702 aaPredicted RBP17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 C16orf62Q7Z3J2 963 aa17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 ATG4DQ86TL0 474 aaPredicted RBP17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 CLECL1Q8IZS7 167 aa17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 CLEC4FQ8N1N0 589 aa17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 KBTBD8Q8NFY9 601 aa17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 TMEM234Q8WY98 164 aa17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 NEUROG1Q92886 237 aa17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 ZNF775Q96BV0 537 aaPredicted RBP17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 SLC35G5Q96KT7 338 aa17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 PARD6BQ9BYG5 372 aa17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 EXD2Q9NVH0 621 aa17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 ASIC5Q9NY37 505 aa17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 RAB21Q9UL25 225 aa17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 MKLN1Q9UL63 735 aa17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 PCDHGB4Q9UN71 923 aa17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 LIPT1Q9Y234 373 aa17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 MAGED1Q9Y5V3 778 aaPredicted RBP17.43■□□□□ 0.38
TNFRSF1B-204ENST00000536782 RNF103-CHMP3A0A140T963 221 aa17.42■□□□□ 0.38
TNFRSF1B-204ENST00000536782 DPRXA6NFQ7 191 aa17.42■□□□□ 0.38
TNFRSF1B-204ENST00000536782 RNASET2O00584 256 aaKnown RBP17.42■□□□□ 0.38
TNFRSF1B-204ENST00000536782 UBTFL6P0CB48 400 aaPredicted RBP17.42■□□□□ 0.38
TNFRSF1B-204ENST00000536782 CREB1P16220 341 aa17.42■□□□□ 0.38
TNFRSF1B-204ENST00000536782 PGCP20142 388 aa17.42■□□□□ 0.38
TNFRSF1B-204ENST00000536782 CDKN1AP38936 164 aa17.42■□□□□ 0.38
TNFRSF1B-204ENST00000536782 DIO1P49895 249 aa17.42■□□□□ 0.38
TNFRSF1B-204ENST00000536782 SESN3P58005 492 aa17.42■□□□□ 0.38
TNFRSF1B-204ENST00000536782 CSNK2A1P68400 391 aaPredicted RBP17.42■□□□□ 0.38
TNFRSF1B-204ENST00000536782 MERTKQ12866 999 aa17.42■□□□□ 0.38
TNFRSF1B-204ENST00000536782 PPA1Q15181 289 aa17.42■□□□□ 0.38
TNFRSF1B-204ENST00000536782 STK11Q15831 433 aa17.42■□□□□ 0.38
TNFRSF1B-204ENST00000536782 TMPPEQ6ZT21 453 aa17.42■□□□□ 0.38
TNFRSF1B-204ENST00000536782 EIF3MQ7L2H7 374 aaKnown RBP17.42■□□□□ 0.38
TNFRSF1B-204ENST00000536782 GALNT5Q7Z7M9 940 aa17.42■□□□□ 0.38
TNFRSF1B-204ENST00000536782 ZNF100Q8IYN0 542 aa17.42■□□□□ 0.38
TNFRSF1B-204ENST00000536782 MUCL1Q96DR8 90 aa17.42■□□□□ 0.38
TNFRSF1B-204ENST00000536782 ZIM3Q96PE6 472 aa17.42■□□□□ 0.38
TNFRSF1B-204ENST00000536782 ZNF300Q96RE9 604 aaPredicted RBP17.42■□□□□ 0.38
TNFRSF1B-204ENST00000536782 TRIM2Q9C040 744 aa17.42■□□□□ 0.38
TNFRSF1B-204ENST00000536782 ZNF350Q9GZX5 532 aa17.42■□□□□ 0.38
TNFRSF1B-204ENST00000536782 OR51I1Q9H343 314 aa17.42■□□□□ 0.38
TNFRSF1B-204ENST00000536782 PLCE1Q9P212 2302 aa17.42■□□□□ 0.38
TNFRSF1B-204ENST00000536782 ALPK2Q86TB3 2170 aa17.41■□□□□ 0.38
TNFRSF1B-204ENST00000536782 CENPVL1A0A0U1RR11 272 aa17.41■□□□□ 0.38
TNFRSF1B-204ENST00000536782 RNF223E7ERA6 249 aa17.41■□□□□ 0.38
TNFRSF1B-204ENST00000536782 SULT2B1O00204 365 aa17.41■□□□□ 0.38
TNFRSF1B-204ENST00000536782 PGGHGQ32M88 737 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms